Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4909 Papaver somniferum HOM05D021794 ORTHO05D016335 8.6e-210 733.8 483 100.0
PSO063G5953 Papaver somniferum HOM05D021794 ORTHO05D016335 2.5e-201 705.7 483 93.0
Aqoxy7G02994 Aquilegia oxysepala HOM05D021794 ORTHO05D009846 5.3e-26 123.2 483 33.7
MBI14_g19445_MAGBIO Magnolia biondii HOM05D021794 ORTHO05D009846 8.2e-19 99.4 479 33.2
Nn8g40403 Nelumbo nucifera HOM05D021794 ORTHO05D016335 5.5e-15 86.7 511 38.6
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 6.9e-10 69.7 480 29.2
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.3e-08 65.5 54 66.7
FAN13G0757 Fragaria x ananassa HOM05D003021 ORTHO05D002235 2.2e-08 64.7 54 68.5
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 2.2e-08 64.7 485 28.2
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 3.8e-08 63.9 135 37.8
FAN08G3689 Fragaria x ananassa HOM05D003021 ORTHO05D002235 5.0e-08 63.5 54 66.7
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 1.1e-07 62.4 48 70.8
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 1.1e-07 62.4 130 37.7
Dinv21138 Davidia involucrata HOM05D003021 ORTHO05D009846 1.4e-07 62.0 50 70.0
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 1.4e-07 62.0 489 29.9
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 1.4e-07 62.0 54 63.0
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 1.9e-07 61.6 54 61.1
FvH4_5g14370 Fragaria vesca HOM05D003021 ORTHO05D002235 2.5e-07 61.2 54 64.8
Lj8P473T2 Lonicera japonica HOM05D031498 ORTHO05D016335 2.5e-07 61.2 135 37.0
QL10p018571 Quercus lobata HOM05D003021 ORTHO05D002235 2.5e-07 61.2 56 64.3
HPP92_015800 Vanilla planifolia HOM05D031498 ORTHO05D016335 2.5e-07 61.2 49 67.3
HPP92_015807 Vanilla planifolia HOM05D031498 ORTHO05D016335 2.5e-07 61.2 49 67.3
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 3.2e-07 60.8 46 73.9
CiPaw.03G091400 Carya illinoinensis HOM05D003021 ORTHO05D002235 3.2e-07 60.8 59 61.0
CsaV3_1G005770 Cucumis sativus L. HOM05D003021 ORTHO05D002235 3.2e-07 60.8 54 63.0
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 4.2e-07 60.5 64 59.4
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 4.2e-07 60.5 64 59.4
Migut.H00652 Erythranthe guttata HOM05D003021 ORTHO05D002235 4.2e-07 60.5 56 62.5
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 4.2e-07 60.5 54 63.0
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 5.5e-07 60.1 47 70.2
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 5.5e-07 60.1 47 70.2
Manes.01G099000 Manihot esculenta HOM05D003021 ORTHO05D002235 5.5e-07 60.1 52 65.4
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 5.5e-07 60.1 46 71.7
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 5.5e-07 60.1 57 57.9
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 7.2e-07 59.7 79 50.6
RcHm_v2.0_Chr7g0182331 Rosa chinensis HOM05D003021 ORTHO05D002235 7.2e-07 59.7 47 70.2
Lj2g0010760 Lotus japonicus HOM05D003021 ORTHO05D002235 9.4e-07 59.3 93 46.2
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 9.4e-07 59.3 47 70.2
RcHm_v2.0_Chr2g0166531 Rosa chinensis HOM05D003021 ORTHO05D002235 9.4e-07 59.3 47 70.2
Lj9P468T32 Lonicera japonica HOM05D003021 ORTHO05D002235 1.2e-06 58.9 54 61.1
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 1.2e-06 58.9 77 51.9
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 1.2e-06 58.9 47 68.1
EL10Ac2g03757 Beta vulgaris HOM05D016385 ORTHO05D018262 1.6e-06 58.5 478 32.2
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 1.6e-06 58.5 47 68.1
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 1.6e-06 58.5 488 25.6
Lsat_1_v5_gn_3_25381 Lactuca sativa HOM05D033113 ORTHO05D009846 1.6e-06 58.5 41 73.2
Hma1.2p1_1813F.1_g303770 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 2.1e-06 58.2 57 61.4
Hma1.2p1_3044F.1_g332070 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 2.1e-06 58.2 57 61.4
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 2.1e-06 58.2 49 67.3
Nitab4.5_0000502g0110 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.1e-06 58.2 142 34.5
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 2.1e-06 58.2 47 68.1
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 2.1e-06 58.2 81 50.6
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 2.7e-06 57.8 477 27.5
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 2.7e-06 57.8 54 61.1
Rhsim12G0153000 Rhododendron simsii HOM05D003021 ORTHO05D002235 2.7e-06 57.8 109 41.3
Sp6g28670 Schrenkiella parvula HOM05D009950 ORTHO05D002235 2.7e-06 57.8 114 40.4
Ah.02g113870 Amaranthus hybridus HOM05D003021 ORTHO05D002235 3.6e-06 57.4 100 40.0
CANSAT80G0381 Cannabis sativa HOM05D003021 ORTHO05D002235 3.6e-06 57.4 44 72.7
ClCG04G012000 Citrullus lanatus HOM05D003021 ORTHO05D002235 3.6e-06 57.4 99 41.4
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 3.6e-06 57.4 40 75.0
Lalb_Chr06g0175101 Lupinus albus HOM05D003021 ORTHO05D002235 3.6e-06 57.4 64 51.6
Oeu000639.1 Olea europaea HOM05D003021 ORTHO05D002235 3.6e-06 57.4 54 61.1
Os03g0211400 Oryza sativa ssp. japonica HOM05D003021 ORTHO05D002235 3.6e-06 57.4 72 52.8
Prupe.5G200000 Prunus persica HOM05D003021 ORTHO05D002235 3.6e-06 57.4 59 55.9
Medtr7g012290 Medicago truncatula HOM05D003021 ORTHO05D002235 4.7e-06 57.0 47 70.2
AL7G50940 Arabidopsis lyrata HOM05D003021 ORTHO05D002235 6.1e-06 56.6 47 66.0
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 6.1e-06 56.6 91 46.2
Carub.0007s3655 Capsella rubella HOM05D003021 ORTHO05D002235 6.1e-06 56.6 47 66.0
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 7.9e-06 56.2 66 53.0
HanXRQChr15g0488721 Helianthus annuus HOM05D003021 ORTHO05D002235 7.9e-06 56.2 52 63.5
Lalb_Chr08g0243541 Lupinus albus HOM05D013197 ORTHO05D012811 7.9e-06 56.2 68 55.9
Sed0006399 Sechium edule HOM05D003021 ORTHO05D002235 7.9e-06 56.2 119 37.8


User provided reference genes

Program Settings