Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.0e-204 714.5 360 100.0
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.0e-199 699.9 360 97.8
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 4.4e-134 481.9 348 67.5
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 5.7e-134 481.5 347 67.7
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 8.2e-133 477.6 345 67.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 8.2e-133 477.6 345 67.5
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 5.3e-132 474.9 349 68.2
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-129 466.8 348 68.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.1e-128 461.5 348 66.7
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-126 456.1 350 66.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 5.0e-122 441.8 358 61.5
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-121 440.7 336 67.3
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 8.0e-120 434.5 351 61.3
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.0e-119 432.2 348 62.9
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 9.8e-118 427.6 349 62.8
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.3e-117 427.2 353 60.3
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.2e-117 426.4 350 60.9
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.8e-117 426.0 347 63.4
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 4.9e-117 425.2 349 61.0
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 3.1e-116 422.5 328 65.9
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.6e-115 420.2 354 59.3
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.6e-115 420.2 348 61.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.5e-115 419.1 358 60.6
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.3e-114 417.2 349 62.8
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.3e-114 416.4 350 59.1
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.9e-114 416.0 346 62.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 5.0e-114 415.2 358 60.9
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.6e-114 414.8 348 62.9
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.6e-114 414.5 349 61.3
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.1e-113 414.1 360 60.0
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.1e-113 414.1 350 60.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.5e-113 413.7 349 61.3
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 7.2e-113 411.4 366 57.4
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.6e-112 410.2 356 58.1
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.1e-112 409.8 349 59.0
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 3.6e-112 409.1 349 60.7
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.6e-112 409.1 349 60.5
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.6e-112 409.1 349 60.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 8.0e-112 407.9 348 58.0
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.3e-111 406.4 349 58.7
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.8e-111 404.8 359 58.5
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 8.9e-111 404.4 359 58.5
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 8.9e-111 404.4 359 58.5
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.5e-110 403.7 349 58.5
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 2.6e-110 402.9 349 59.6
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 4.4e-110 402.1 351 57.0
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 5.7e-110 401.7 346 56.6
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 5.7e-110 401.7 349 60.2
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 7.5e-110 401.4 356 59.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 7.5e-110 401.4 353 59.2
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 9.8e-110 401.0 369 57.7
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.3e-109 400.6 374 55.1
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.1e-108 397.5 352 57.7
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 3.2e-108 396.0 351 58.7
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 4.1e-108 395.6 340 60.9
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 5.4e-108 395.2 354 58.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 5.4e-108 395.2 354 58.2
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 7.0e-108 394.8 350 59.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.0e-107 393.3 363 57.6
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-107 392.1 348 59.8
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 7.8e-107 391.3 367 56.1
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.7e-106 390.2 362 56.9
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 5.0e-106 388.7 333 61.0
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.5e-105 387.1 354 57.6
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.3e-105 386.0 366 56.6
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 3.6e-104 382.5 362 58.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 8.0e-104 381.3 366 56.3
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 1.4e-103 380.6 362 56.1
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.4e-103 380.6 361 57.3
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.4e-103 380.6 368 55.7
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.4e-103 380.6 364 58.2
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 4.0e-103 379.0 372 54.0
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.5e-102 377.1 364 55.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 5.8e-102 375.2 348 55.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 9.8e-102 374.4 353 55.2
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 8.3e-101 371.3 361 55.7
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.4e-100 370.5 357 54.3
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.4e-100 370.5 368 54.3
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.9e-100 370.2 357 55.7
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.4e-100 368.6 351 53.8
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 7.0e-100 368.2 359 56.0
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 9.2e-100 367.9 354 54.2
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 4.6e-99 365.5 351 57.0
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 6.6e-98 361.7 354 54.8
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 3.3e-97 359.4 348 56.6
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 2.1e-96 356.7 344 57.3
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 8.1e-96 354.8 344 57.0
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.2e-94 350.9 344 52.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 9.8e-94 347.8 338 55.6
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.7e-93 347.1 335 56.7
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.4e-92 343.2 360 52.8
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 6.8e-87 325.1 357 51.5
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.9e-85 318.9 249 63.5
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 3.2e-84 316.2 330 51.5
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.1e-84 315.8 240 64.6
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 3.0e-82 309.7 350 48.6
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 5.2e-79 298.9 356 47.2
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.7e-77 293.9 356 44.1
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.7e-74 283.9 230 63.5
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.5e-73 280.8 288 53.1
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.5e-73 280.0 371 42.0
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 9.3e-68 261.5 231 61.0
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.0e-63 245.0 205 64.4
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-61 240.7 205 63.9
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.1e-60 238.0 163 65.0
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-60 236.5 202 63.4
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 6.2e-56 222.2 206 56.3
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 8.1e-56 221.9 311 42.8
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.6e-54 216.9 205 55.6
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 2.1e-51 207.2 209 55.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.6e-48 197.6 233 48.1
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.7e-48 196.4 395 31.9
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 8.4e-45 185.3 155 61.9
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.1e-39 168.3 139 56.1
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-38 163.7 119 65.5
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.7e-38 162.2 200 48.5
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 3.2e-36 156.8 166 47.0
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.2e-16 89.0 63 63.5
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-13 82.0 63 57.1
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 1.0e-13 82.0 161 31.7
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.8e-10 68.9 63 52.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.0e-09 67.8 134 35.8
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 9.8e-09 65.5 49 63.3
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.1e-07 62.0 70 50.0
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 4.1e-07 60.1 50 58.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 4.1e-07 60.1 50 58.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 4.1e-07 60.1 50 58.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 4.1e-07 60.1 50 58.0


User provided reference genes

Program Settings