Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 5.0e-216 754.2 392 100.0
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 2.3e-168 595.9 316 98.4
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 2.1e-150 536.2 384 74.7
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 7.1e-146 521.2 385 72.2
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 4.0e-141 505.4 338 76.9
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 1.2e-140 503.8 346 75.7
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 1.5e-140 503.4 349 75.6
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 9.9e-140 500.7 327 76.8
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 3.5e-137 492.3 385 69.1
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 3.9e-136 488.8 354 70.1
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 5.1e-136 488.4 357 72.5
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 1.9e-135 486.5 328 76.5
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 2.5e-135 486.1 372 70.4
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 4.3e-135 485.3 390 67.7
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 5.6e-135 485.0 348 71.6
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 3.6e-134 482.3 350 70.3
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 4.0e-133 478.8 348 71.8
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 5.3e-133 478.4 335 71.6
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 1.2e-132 477.2 372 69.1
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 1.5e-132 476.9 395 64.1
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 1.5e-132 476.9 345 71.3
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 2.6e-132 476.1 386 66.6
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 2.6e-132 476.1 344 72.1
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 4.5e-132 475.3 345 70.7
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 5.8e-132 474.9 344 71.8
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 6.4e-131 471.5 337 71.5
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 8.4e-131 471.1 318 74.8
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 1.1e-130 470.7 343 70.3
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 1.1e-130 470.7 360 70.6
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.4e-130 470.3 328 72.3
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 1.4e-130 470.3 350 70.6
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 1.9e-130 469.9 346 71.4
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.2e-130 469.2 355 69.0
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 3.2e-130 469.2 349 69.1
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 1.2e-129 467.2 341 68.9
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 3.5e-129 465.7 340 72.4
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 1.3e-128 463.8 338 73.1
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 1.8e-128 463.4 344 68.9
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 3.9e-128 462.2 337 73.9
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 5.1e-128 461.8 339 71.7
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 8.7e-128 461.1 383 64.8
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 1.1e-127 460.7 340 70.9
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.9e-127 459.9 338 69.8
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 2.5e-127 459.5 351 70.4
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 7.4e-127 458.0 339 68.7
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 9.6e-127 457.6 359 67.4
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 1.6e-126 456.8 318 73.3
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 2.8e-126 456.1 349 68.2
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 1.1e-125 454.1 372 67.2
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 4.9e-123 445.3 338 69.5
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 1.4e-122 443.7 359 64.9
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 1.4e-122 443.7 340 68.8
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 1.4e-122 443.7 339 68.7
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 1.9e-122 443.4 359 66.6
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 7.1e-122 441.4 357 65.0
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 7.1e-122 441.4 368 64.1
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 2.1e-121 439.9 357 64.4
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 3.5e-121 439.1 328 69.5
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 3.5e-121 439.1 339 68.4
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 3.5e-121 439.1 339 68.4
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 3.5e-121 439.1 345 65.2
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 6.0e-121 438.3 341 67.7
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 3.0e-120 436.0 344 66.9
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 2.8e-118 429.5 328 68.3
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 6.2e-118 428.3 384 60.9
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 6.2e-118 428.3 328 68.0
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 8.1e-118 427.9 328 69.2
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 9.0e-117 424.5 333 67.9
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.5e-116 423.7 332 65.7
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.3e-115 420.6 306 70.9
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 2.2e-115 419.9 372 60.5
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 8.4e-115 417.9 345 63.2
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 1.1e-114 417.5 345 62.9
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 1.4e-114 417.2 375 61.1
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 2.5e-114 416.4 345 62.6
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 1.2e-113 414.1 295 70.8
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 3.5e-113 412.5 346 63.3
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 3.5e-113 412.5 355 60.3
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 6.7e-112 408.3 340 62.1
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.5e-111 407.1 341 63.0
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 7.4e-111 404.8 357 59.4
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 1.6e-110 403.7 399 56.9
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 4.8e-110 402.1 304 64.5
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 4.1e-109 399.1 379 58.0
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 9.0e-109 397.9 330 60.9
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.6e-108 396.4 257 77.0
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 7.6e-108 394.8 341 60.7
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 2.5e-106 389.8 341 60.4
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 3.7e-102 375.9 313 67.1
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 7.2e-98 361.7 357 56.0
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 7.9e-97 358.2 329 55.0
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 6.7e-96 355.1 251 71.7
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 5.7e-95 352.1 294 63.9
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 2.8e-94 349.7 227 78.0
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 2.4e-93 346.7 289 57.1
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.2e-92 344.4 356 55.3
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 4.2e-90 335.9 303 59.4
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 7.2e-90 335.1 306 55.2
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 3.7e-86 322.8 261 65.9
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 1.3e-83 314.3 323 52.3
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 1.5e-82 310.8 198 78.3
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 5.5e-82 308.9 310 50.3
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 2.0e-79 300.4 311 56.3
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.3e-75 287.7 271 60.1
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 3.8e-75 286.2 254 59.1
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 1.4e-72 277.7 198 71.2
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 1.4e-72 277.7 173 80.9
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.7e-67 260.8 228 61.0
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 5.0e-67 259.2 200 71.5
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 4.7e-65 252.7 163 79.1
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 1.4e-64 251.1 253 56.1
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 2.0e-55 220.7 295 42.0
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.8e-48 197.6 299 46.5
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 2.0e-47 194.1 273 41.4
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 3.2e-45 186.8 138 67.4
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.6e-41 174.5 249 36.9
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.4e-32 144.8 105 72.4
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 2.4e-32 144.1 240 42.1
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 3.5e-28 130.2 120 57.5
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 2.4e-24 117.5 82 76.8
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 1.5e-23 114.8 226 37.6
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 9.9e-23 112.1 82 72.0
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 2.2e-14 84.3 62 67.7
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 7.1e-13 79.3 73 58.9
Medtr2g021155 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-07 61.6 59 57.6
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 7.6e-07 59.3 46 67.4


User provided reference genes

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