Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 8.3e-96 353.6 166 100.0
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 1.2e-94 349.7 166 98.8
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 8.9e-82 307.0 166 84.3
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.7e-80 302.8 166 82.5
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 6.4e-80 300.8 166 82.5
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 6.4e-80 300.8 166 82.5
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 8.3e-80 300.4 166 80.7
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 1.4e-79 299.7 164 81.7
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 1.9e-79 299.3 166 80.7
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 1.9e-79 299.3 166 81.9
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 2.4e-79 298.9 166 83.1
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 2.4e-79 298.9 166 83.1
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 2.4e-79 298.9 164 83.5
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 4.1e-79 298.1 166 81.3
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 4.1e-79 298.1 166 81.3
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 7.0e-79 297.4 166 81.9
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 1.2e-78 296.6 166 78.3
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 1.2e-78 296.6 166 81.3
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.2e-78 296.6 166 80.1
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 1.6e-78 296.2 166 81.9
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 2.0e-78 295.8 166 81.9
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 2.7e-78 295.4 166 81.9
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 4.6e-78 294.7 166 80.7
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 6.0e-78 294.3 166 78.9
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 7.8e-78 293.9 163 82.2
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 7.8e-78 293.9 164 80.5
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 7.8e-78 293.9 166 81.3
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.0e-77 293.5 164 79.3
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 1.0e-77 293.5 166 81.3
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 2.3e-77 292.4 166 83.7
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 2.3e-77 292.4 166 80.1
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 3.0e-77 292.0 162 79.0
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 3.9e-77 291.6 166 79.5
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 3.9e-77 291.6 166 81.3
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 8.6e-77 290.4 166 78.9
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 8.6e-77 290.4 166 78.9
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 8.6e-77 290.4 166 79.5
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 8.6e-77 290.4 166 78.3
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 1.1e-76 290.0 166 78.3
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 1.1e-76 290.0 166 79.5
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 1.5e-76 289.7 166 78.9
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 1.5e-76 289.7 164 80.5
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 1.9e-76 289.3 166 78.3
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 1.9e-76 289.3 166 80.1
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.9e-76 289.3 166 80.1
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 1.9e-76 289.3 166 78.9
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 2.5e-76 288.9 166 77.7
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 3.3e-76 288.5 167 79.0
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 3.3e-76 288.5 166 78.3
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.3e-76 288.5 166 79.5
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 4.3e-76 288.1 164 79.3
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 5.6e-76 287.7 165 78.8
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 5.6e-76 287.7 166 78.3
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 7.3e-76 287.3 166 78.3
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 7.3e-76 287.3 166 78.3
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 7.3e-76 287.3 166 76.5
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 9.5e-76 287.0 166 78.3
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 2.1e-75 285.8 166 77.7
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 3.6e-75 285.0 167 79.0
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 6.2e-75 284.3 166 79.5
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 6.2e-75 284.3 166 80.1
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 8.0e-75 283.9 166 77.7
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 1.1e-74 283.5 166 75.9
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.8e-74 282.7 166 77.7
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 2.3e-74 282.3 164 78.0
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 2.3e-74 282.3 164 77.4
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 3.1e-74 282.0 166 78.9
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 5.2e-74 281.2 164 78.0
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 1.2e-73 280.0 166 77.1
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.5e-73 279.6 165 79.4
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 3.4e-73 278.5 166 75.9
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 4.4e-73 278.1 166 77.7
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 2.9e-72 275.4 159 81.1
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 4.9e-72 274.6 166 75.9
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 6.4e-72 274.2 165 72.7
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 7.0e-71 270.8 166 74.1
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.5e-68 263.1 145 82.1
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 3.1e-66 255.4 162 72.8
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 2.6e-65 252.3 165 72.1
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 5.8e-65 251.1 163 68.7
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 6.4e-64 247.7 203 58.1
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.4e-63 246.5 166 72.3
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 1.3e-61 240.0 263 49.8
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 3.1e-58 228.8 127 84.3
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 3.8e-56 221.9 168 63.7
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 1.4e-55 219.9 142 70.4
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 3.0e-53 212.2 118 83.9
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 4.3e-52 208.4 156 60.9
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 1.6e-51 206.5 107 88.8
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 2.8e-51 205.7 158 59.5
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 2.0e-49 199.5 160 56.9
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 6.4e-48 194.5 165 58.2
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.2e-38 163.7 84 88.1
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 2.5e-36 156.0 83 84.3
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 4.3e-36 155.2 82 85.4
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 2.8e-35 152.5 92 75.0
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 4.8e-35 151.8 92 73.9
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 2.0e-33 146.4 84 77.4
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 3.4e-33 145.6 87 74.7
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 2.9e-32 142.5 83 74.7
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.8e-32 142.1 83 75.9
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 3.0e-29 132.5 83 69.9
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 5.1e-29 131.7 83 68.7
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.8e-27 125.9 95 66.3
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 2.2e-16 89.7 72 65.3
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 1.8e-10 70.1 44 75.0


User provided reference genes

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