Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 0.0e+00 1149.0 572 100.0
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 7.1e-264 913.7 479 96.9
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.1e-134 482.6 478 54.8
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.1e-118 431.4 424 55.7
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 4.2e-115 419.5 478 50.6
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 4.4e-112 409.5 484 50.4
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 6.3e-111 405.6 457 50.3
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 4.5e-109 399.4 482 48.5
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 6.5e-108 395.6 487 47.6
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 6.8e-105 385.6 481 46.6
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 2.6e-104 383.6 478 49.2
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 1.3e-103 381.3 482 46.3
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 2.4e-102 377.1 489 47.9
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 5.4e-102 375.9 484 46.3
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 7.0e-102 375.6 479 44.7
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 5.9e-101 372.5 488 45.9
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 2.9e-100 370.2 406 50.0
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 5.0e-100 369.4 395 51.4
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 1.5e-99 367.9 474 46.8
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.5e-99 367.9 311 60.1
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 4.7e-98 362.8 405 50.6
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 8.0e-98 362.1 476 46.8
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.3e-97 360.5 474 46.8
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 3.0e-97 360.1 477 45.7
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 4.0e-97 359.8 486 45.1
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 5.2e-97 359.4 488 44.9
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 8.9e-97 358.6 493 44.8
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 2.6e-96 357.1 486 44.9
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 2.2e-95 354.0 474 44.9
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 2.2e-95 354.0 422 46.9
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 2.8e-95 353.6 447 44.7
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 3.5e-93 346.7 479 43.6
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 2.9e-92 343.6 420 46.2
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.1e-91 341.7 454 44.9
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.3e-91 339.7 399 47.4
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 9.5e-91 338.6 498 43.0
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 1.2e-90 338.2 455 46.2
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 2.8e-90 337.0 486 41.8
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 1.4e-89 334.7 540 41.9
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.4e-89 334.7 396 47.5
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 2.3e-89 334.0 406 45.6
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 2.0e-88 330.9 454 43.2
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 2.6e-88 330.5 410 47.1
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 2.9e-87 327.0 431 43.4
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 3.7e-87 326.6 420 44.8
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 3.7e-87 326.6 420 45.2
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 3.2e-86 323.6 406 45.1
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 4.1e-86 323.2 452 42.5
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.6e-85 321.2 477 41.3
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 6.0e-85 319.3 406 44.3
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 3.9e-84 316.6 446 40.4
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 6.6e-84 315.8 455 42.9
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 8.6e-84 315.5 486 40.7
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 8.6e-84 315.5 421 44.9
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 2.5e-83 313.9 457 40.7
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 2.5e-83 313.9 415 42.4
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 4.3e-83 313.2 484 40.5
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 5.6e-83 312.8 475 40.6
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 7.3e-83 312.4 410 44.4
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 1.2e-82 311.6 430 44.0
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 1.2e-82 311.6 478 41.0
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 1.6e-82 311.2 481 41.0
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 1.6e-82 311.2 361 46.8
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 2.8e-82 310.5 396 45.2
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 2.8e-82 310.5 415 42.7
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 4.7e-82 309.7 395 45.1
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 6.2e-82 309.3 487 40.9
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.8e-81 307.8 468 41.5
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 1.8e-81 307.8 443 41.5
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 3.1e-81 307.0 412 43.4
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 4.0e-81 306.6 411 41.6
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 4.0e-81 306.6 410 42.7
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 6.8e-81 305.8 478 40.0
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 6.8e-81 305.8 519 39.5
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 1.2e-80 305.1 497 40.4
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.2e-80 305.1 417 42.2
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 3.4e-80 303.5 381 44.4
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 2.9e-79 300.4 481 39.3
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 4.9e-79 299.7 407 44.5
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 3.2e-78 297.0 406 44.6
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 4.1e-78 296.6 409 44.0
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 9.2e-78 295.4 406 44.6
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 9.2e-78 295.4 442 41.0
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 2.7e-77 293.9 405 44.4
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 4.6e-77 293.1 406 43.8
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 4.6e-77 293.1 406 43.8
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 4.6e-77 293.1 409 43.8
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 6.0e-77 292.7 456 39.5
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.7e-76 291.2 409 43.5
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.1e-76 289.7 263 56.7
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 2.5e-75 287.3 448 40.8
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 4.3e-75 286.6 327 47.7
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 7.3e-75 285.8 489 37.2
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 3.1e-73 280.4 491 38.3
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 6.4e-71 272.7 416 41.3
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 1.7e-68 264.6 338 42.3
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 1.7e-68 264.6 444 38.3
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 3.6e-66 256.9 382 41.4
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.8e-65 254.6 421 39.4
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 1.7e-60 238.0 482 32.4
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.4e-54 216.5 263 45.6
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 1.3e-52 211.8 344 40.4
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 2.1e-50 204.5 320 40.9
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.4e-49 201.1 165 61.8
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 5.4e-46 189.9 302 39.1
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.2e-42 176.4 164 56.1
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 7.1e-38 162.9 194 45.4
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 5.7e-35 153.3 495 27.9
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 2.9e-31 141.0 383 30.3
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 8.4e-31 139.4 146 51.4
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.1e-30 139.0 125 56.8
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.5e-30 137.9 267 37.8
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 3.7e-26 124.0 426 29.8
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 5.3e-25 120.2 288 34.0
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 6.9e-25 119.8 420 27.6
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 1.5e-24 118.6 119 49.6
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 1.1e-22 112.5 101 54.5
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.0e-19 101.7 82 61.0
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 3.3e-19 100.9 99 47.5
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 2.2e-18 98.2 172 39.5
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 9.1e-17 92.8 104 45.2
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.0e-15 87.0 95 45.3
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 5.1e-12 77.0 108 45.4
Os02g0515000 Oryza sativa ssp. japonica HOM05D006020 ORTHO05D007665 3.5e-08 64.3 153 34.0


User provided reference genes

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