Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 2.7e-175 618.6 324 100.0
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 3.8e-169 598.2 324 94.8
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 2.2e-15 87.4 316 32.0
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.4e-14 84.0 341 30.2
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 6.5e-12 75.9 165 35.8
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 2.5e-11 73.9 319 29.5
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 7.2e-11 72.4 321 30.5
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.2e-10 71.6 238 30.3
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.2e-10 71.6 200 35.5
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 4.7e-10 69.7 161 33.5
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 6.1e-10 69.3 157 35.0
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 7.9e-10 68.9 171 32.7
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 7.9e-10 68.9 312 27.2
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 7.9e-10 68.9 275 29.5
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.4e-09 68.2 166 35.5
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 1.4e-09 68.2 161 32.9
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 2.3e-09 67.4 258 28.3
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 3.0e-09 67.0 242 27.7
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.5e-08 64.7 185 34.1
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.0e-08 64.3 310 29.7
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 5.7e-08 62.8 225 30.2
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 1.3e-07 61.6 299 28.4
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 2.8e-07 60.5 222 29.3
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 2.8e-07 60.5 311 28.6
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.8e-07 60.5 277 26.7
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 3.7e-07 60.1 312 29.5
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 3.7e-07 60.1 321 27.4
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.8e-07 59.7 257 28.4
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 6.3e-07 59.3 256 28.9
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 8.2e-07 58.9 225 29.8
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 8.2e-07 58.9 165 33.9
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 1.1e-06 58.5 155 32.3
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.1e-06 58.5 262 28.2
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 1.1e-06 58.5 180 29.4
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 1.8e-06 57.8 245 31.8
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 2.4e-06 57.4 251 27.5
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.1e-06 57.0 257 28.8
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.1e-06 57.0 149 34.9
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.1e-06 57.0 249 30.5
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 4.1e-06 56.6 153 32.0
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 4.1e-06 56.6 323 26.3
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 4.1e-06 56.6 314 24.5
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 5.3e-06 56.2 255 29.8
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 5.3e-06 56.2 311 25.7
EL10Ac1g02192 Beta vulgaris HOM05D030748 ORTHO05D008337 7.0e-06 55.8 192 29.7
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 7.0e-06 55.8 225 29.3
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 9.1e-06 55.5 165 33.3


User provided reference genes

Program Settings