Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 1.3e-122 443.0 211 100.0
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 2.3e-74 282.7 207 69.1
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 5.1e-74 281.6 208 67.8
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.9e-73 279.6 205 67.3
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 2.5e-73 279.3 208 68.3
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 4.3e-73 278.5 205 66.8
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 4.3e-73 278.5 210 67.6
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 5.6e-73 278.1 207 67.6
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 4.0e-71 271.9 207 64.3
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 5.3e-71 271.6 207 67.1
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 9.0e-71 270.8 207 65.7
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 7.6e-70 267.7 209 63.2
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 1.4e-68 263.5 206 65.0
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 2.4e-68 262.7 206 64.6
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 5.4e-68 261.5 221 57.9
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 5.4e-68 261.5 207 62.8
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 1.2e-67 260.4 210 62.9
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 1.2e-67 260.4 214 62.1
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 2.7e-67 259.2 205 63.4
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 3.5e-67 258.8 208 62.5
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 3.5e-67 258.8 224 58.5
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 4.6e-67 258.5 205 62.4
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 4.6e-67 258.5 209 61.7
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 6.0e-67 258.1 221 57.5
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 6.0e-67 258.1 202 64.9
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 7.9e-67 257.7 214 60.7
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 2.3e-66 256.1 212 61.8
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 2.3e-66 256.1 212 62.3
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 2.3e-66 256.1 207 62.3
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 3.0e-66 255.8 215 60.9
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 3.0e-66 255.8 207 62.3
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 3.9e-66 255.4 208 61.5
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 3.9e-66 255.4 207 61.8
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 5.1e-66 255.0 207 61.8
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 5.1e-66 255.0 210 59.5
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 6.6e-66 254.6 193 62.2
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 6.6e-66 254.6 210 61.9
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 6.6e-66 254.6 215 61.4
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 8.7e-66 254.2 216 59.3
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 8.7e-66 254.2 217 58.5
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 2.5e-65 252.7 205 58.0
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 2.5e-65 252.7 209 61.7
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 2.5e-65 252.7 209 61.7
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 4.3e-65 251.9 203 61.1
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 4.3e-65 251.9 209 61.2
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 4.3e-65 251.9 207 58.5
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 5.6e-65 251.5 203 61.6
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 5.6e-65 251.5 209 60.8
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 5.6e-65 251.5 205 62.9
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 9.6e-65 250.8 215 59.5
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 2.1e-64 249.6 206 58.7
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 2.8e-64 249.2 206 61.7
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 3.6e-64 248.8 203 61.6
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 4.8e-64 248.4 216 58.8
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 8.1e-64 247.7 202 60.4
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 1.4e-63 246.9 205 59.0
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 1.4e-63 246.9 206 59.7
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.8e-63 246.5 207 58.0
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 5.3e-63 245.0 202 59.4
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 6.9e-63 244.6 215 57.2
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 1.5e-62 243.4 204 57.8
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 5.8e-62 241.5 201 58.7
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 5.8e-62 241.5 201 59.7
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 7.6e-62 241.1 206 59.2
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 9.9e-62 240.7 205 56.6
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 1.3e-61 240.4 207 57.0
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 3.8e-61 238.8 201 58.2
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 3.8e-61 238.8 209 60.3
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 4.9e-61 238.4 203 58.1
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 4.9e-61 238.4 203 58.1
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.4e-60 236.9 205 55.6
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.9e-60 236.5 201 57.2
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 1.9e-60 236.5 201 57.7
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 1.9e-60 236.5 203 58.1
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 4.2e-60 235.3 201 57.2
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 9.3e-60 234.2 204 56.4
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 1.2e-59 233.8 218 56.4
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.6e-59 233.4 215 57.7
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 2.7e-59 232.6 201 57.2
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 3.5e-59 232.3 205 57.6
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 4.6e-59 231.9 208 55.8
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 6.0e-59 231.5 199 57.8
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 1.3e-58 230.3 194 56.2
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 2.3e-58 229.6 199 57.3
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 2.5e-57 226.1 212 56.1
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 2.5e-57 226.1 202 55.4
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 5.6e-57 224.9 205 53.2
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 7.4e-57 224.6 206 53.9
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 7.4e-57 224.6 206 53.4
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 7.4e-57 224.6 207 54.6
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 2.4e-55 219.5 185 61.1
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 4.0e-55 218.8 205 56.6
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 1.2e-54 217.2 211 52.1
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 1.7e-53 213.4 222 50.9
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 8.4e-53 211.1 165 64.2
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.5e-52 209.5 178 56.7
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 7.1e-52 208.0 176 59.7
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 4.6e-51 205.3 190 57.4
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 3.1e-47 192.6 158 62.0
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 1.4e-44 183.7 177 55.4
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.1e-43 179.9 117 70.9
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 1.1e-41 174.1 161 54.0
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 1.3e-40 170.6 157 57.3
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 1.3e-40 170.6 211 45.0
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 1.6e-40 170.2 157 54.1
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 3.7e-40 169.1 201 47.3
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 6.3e-40 168.3 200 46.0
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 6.3e-40 168.3 234 42.3
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 3.1e-39 166.0 221 39.4
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 5.0e-37 158.7 122 64.8
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 4.1e-31 139.0 156 50.0
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 1.1e-28 131.0 113 53.1
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 4.1e-23 112.5 127 48.0
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 1.5e-20 104.0 122 49.2
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 7.2e-20 101.7 128 45.3
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 9.4e-20 101.3 70 67.1
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 5.9e-14 82.0 58 69.0
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 1.5e-12 77.4 50 64.0
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 8.0e-11 71.6 155 34.2
Cre14.g615250 Chlamydomonas reinhardtii HOM05D006792 ORTHO05D008489 5.2e-10 68.9 98 40.8
Cre17.g702150 Chlamydomonas reinhardtii HOM05D005776 ORTHO05D007333 4.8e-08 62.4 86 37.2
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 3.1e-07 59.7 73 38.4
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 7.0e-07 58.5 68 45.6
CBR_g30695 Chara braunii HOM05D005776 ORTHO05D007333 5.9e-06 55.5 73 35.6


User provided reference genes

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