Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4450 Papaver somniferum HOM05D010375 ORTHO05D000233 4.6e-85 317.8 152 100.0
PSO675G2505 Papaver somniferum HOM05D010375 ORTHO05D000233 3.9e-76 288.1 152 94.7
PSO063G4994 Papaver somniferum HOM05D010375 ORTHO05D000233 3.7e-74 281.6 139 99.3
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 3.7e-74 281.6 139 99.3
PSO724G0607 Papaver somniferum HOM05D010375 ORTHO05D000233 3.7e-74 281.6 139 99.3
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 8.1e-74 280.4 139 98.6
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 8.1e-74 280.4 139 98.6
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 8.1e-74 280.4 139 98.6
PSO349G0027 Papaver somniferum HOM05D010375 ORTHO05D000233 3.9e-44 181.8 90 98.9
PSO675G2209 Papaver somniferum HOM05D010375 ORTHO05D000233 2.2e-34 149.4 77 94.8
PSO478G2523 Papaver somniferum HOM05D010375 ORTHO05D000233 1.4e-28 130.2 62 100.0
PSO675G3749 Papaver somniferum HOM05D010375 ORTHO05D000233 3.6e-21 105.5 51 98.0
HanXRQChr09g0253291 Helianthus annuus HOM05D008452 ORTHO05D000233 8.0e-21 104.4 137 38.7
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 8.0e-21 104.4 137 38.7
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 8.0e-21 104.4 137 38.7
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 1.4e-20 103.6 137 38.7
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 2.3e-20 102.8 137 38.0
HanXRQChr13g0403311 Helianthus annuus HOM05D008452 ORTHO05D000233 2.3e-20 102.8 137 38.0
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 2.3e-20 102.8 144 41.7
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 2.3e-20 102.8 144 41.7
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 6.8e-20 101.3 133 40.6
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 1.2e-19 100.5 133 41.4
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 1.2e-19 100.5 133 41.4
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-19 100.5 137 38.0
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-19 100.5 137 38.0
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.4e-19 98.6 139 40.3
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 2.2e-18 96.3 140 39.3
CANSAT56G2878 Cannabis sativa HOM05D000539 ORTHO05D000233 7.8e-16 87.8 138 39.1
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-15 87.4 133 38.3
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 2.9e-15 85.9 135 40.7
Aqoxy3G01843 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 3.8e-15 85.5 138 37.0
Atru.chr6.156 Acer truncatum HOM05D000616 ORTHO05D000233 8.6e-15 84.3 136 38.2
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-15 84.3 141 39.0
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-15 84.3 127 40.2
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-14 83.6 139 36.0
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-14 83.2 127 39.4
RcHm_v2.0_Chr2g0132431 Rosa chinensis HOM05D000539 ORTHO05D000233 4.3e-14 82.0 139 37.4
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 4.3e-14 82.0 142 39.4
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 5.6e-14 81.6 108 39.8
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-14 81.6 134 34.3
Hma1.2p1_0096F.1_g047665 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.5e-14 80.9 139 36.0
Hma1.2p1_0409F.1_g146975 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.5e-14 80.9 139 36.0
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.6e-13 80.1 139 35.3
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-13 80.1 133 37.6
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 2.1e-13 79.7 133 38.3
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 3.6e-13 79.0 137 38.7
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 4.7e-13 78.6 137 38.0
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 6.1e-13 78.2 138 36.2
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 8.0e-13 77.8 133 38.3
MELO3C034902.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.0e-12 77.4 138 34.1
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 1.0e-12 77.4 144 31.9
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-12 77.4 139 35.3
TPR.G11501 Trifolium pratense HOM05D007793 ORTHO05D010104 1.0e-12 77.4 144 33.3
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-12 77.0 137 35.8
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-12 77.0 137 35.8
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-12 77.0 137 35.8
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-12 77.0 137 35.8
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-12 77.0 137 35.8
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.8e-12 76.6 137 35.8
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.3e-12 76.3 142 34.5
Hma1.2p1_0473F.1_g160240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 3.0e-12 75.9 137 35.8
FAN07G0889 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.0e-12 75.5 137 38.0
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-12 75.1 140 34.3
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-12 75.1 140 34.3
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.8e-12 74.7 128 35.9
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.8e-12 74.7 128 35.9
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 6.8e-12 74.7 140 34.3
CANSAT21G2181 Cannabis sativa HOM05D000539 ORTHO05D000233 1.5e-11 73.6 138 33.3
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-11 73.6 148 33.1
Medtr2g037270 Medicago truncatula HOM05D007793 ORTHO05D010104 2.0e-11 73.2 144 34.7
Medtr3g011560 Medicago truncatula HOM05D007793 ORTHO05D010104 2.0e-11 73.2 144 34.7
Medtr8g017000 Medicago truncatula HOM05D007793 ORTHO05D010104 2.0e-11 73.2 144 34.7
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-11 73.2 137 36.5
FvH4_5g19271 Fragaria vesca HOM05D000539 ORTHO05D000233 2.6e-11 72.8 148 31.1
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 2.6e-11 72.8 134 31.3
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 3.4e-11 72.4 137 35.8
CANSAT11G2234 Cannabis sativa HOM05D000539 ORTHO05D000233 4.4e-11 72.0 138 33.3
FAN06G1168 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.4e-11 72.0 143 32.9
SHI18457 Sapria himalayana HOM05D000616 ORTHO05D000233 4.4e-11 72.0 138 34.8
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-11 71.6 136 35.3
FvH4_7g02152 Fragaria vesca HOM05D000539 ORTHO05D000233 7.5e-11 71.2 141 31.9
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 7.5e-11 71.2 140 33.6
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 7.5e-11 71.2 137 34.3
SHI42017 Sapria himalayana HOM05D000616 ORTHO05D000233 7.5e-11 71.2 137 35.8
SHI03460 Sapria himalayana HOM05D000616 ORTHO05D000233 9.8e-11 70.9 137 34.3
SHI40319 Sapria himalayana HOM05D000616 ORTHO05D000233 2.2e-10 69.7 137 35.0
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-10 69.3 143 33.6
FvH4_1g29807 Fragaria vesca HOM05D000539 ORTHO05D000233 3.7e-10 68.9 146 30.1
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 3.7e-10 68.9 138 32.6
SHI25890 Sapria himalayana HOM05D000616 ORTHO05D000233 3.7e-10 68.9 137 35.0
FAN14G5321 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.9e-10 68.6 143 30.8
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 4.9e-10 68.6 137 32.8
SHI13149 Sapria himalayana HOM05D000616 ORTHO05D000233 8.3e-10 67.8 137 33.6
TPR.G25298 Trifolium pratense HOM05D000107 ORTHO05D000062 1.1e-09 67.4 140 32.1
FAN01G1775 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-09 67.0 148 31.1
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-09 67.0 101 41.6
SHI39865 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-09 67.0 137 35.0
HanXRQChr10g0317551 Helianthus annuus HOM05D000616 ORTHO05D000233 1.8e-09 66.6 126 35.7
SHI23010 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-09 66.6 137 32.1
TPR.G7531 Trifolium pratense HOM05D009291 ORTHO05D010716 1.8e-09 66.6 133 34.6
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 2.4e-09 66.2 126 35.7
FAN03G1033 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-09 65.5 143 31.5
FAN16G1830 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-09 65.5 143 31.5
FvH4_2g07751 Fragaria vesca HOM05D000539 ORTHO05D000233 5.4e-09 65.1 141 31.2
SHI23185 Sapria himalayana HOM05D000616 ORTHO05D000233 5.4e-09 65.1 137 34.3
SHI14905 Sapria himalayana HOM05D000616 ORTHO05D000233 7.0e-09 64.7 137 31.4
SHI17347 Sapria himalayana HOM05D000616 ORTHO05D000233 7.0e-09 64.7 137 31.4
SHI27547 Sapria himalayana HOM05D000616 ORTHO05D000233 7.0e-09 64.7 137 33.6
SHI37190 Sapria himalayana HOM05D000616 ORTHO05D000233 9.2e-09 64.3 137 33.6
SHI44094 Sapria himalayana HOM05D000616 ORTHO05D000233 9.2e-09 64.3 135 31.9
SHI32661 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-08 63.9 137 33.6
RcHm_v2.0_Chr1g0342101 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-08 63.5 93 36.6
RcHm_v2.0_Chr2g0090831 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-08 63.5 93 36.6
RcHm_v2.0_Chr4g0391901 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-08 63.5 93 36.6
SHI01020 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-08 63.5 135 33.3
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.7e-08 62.8 107 37.4
SHI34223 Sapria himalayana HOM05D000616 ORTHO05D000233 2.7e-08 62.8 137 32.8
Lsat_1_v5_gn_6_60260 Lactuca sativa HOM05D008452 ORTHO05D010294 3.5e-08 62.4 90 35.6
SHI05590 Sapria himalayana HOM05D000616 ORTHO05D000233 3.5e-08 62.4 138 32.6
SHI38345 Sapria himalayana HOM05D000616 ORTHO05D000233 3.5e-08 62.4 137 33.6
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 3.5e-08 62.4 132 34.1
TPR.G24416 Trifolium pratense HOM05D009291 ORTHO05D000233 3.5e-08 62.4 140 30.7
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 4.6e-08 62.0 99 35.4
SHI34381 Sapria himalayana HOM05D000616 ORTHO05D000233 4.6e-08 62.0 124 32.3
HanXRQChr01g0030191 Helianthus annuus HOM05D009775 ORTHO05D011458 5.9e-08 61.6 136 30.1
SHI24699 Sapria himalayana HOM05D000616 ORTHO05D000233 5.9e-08 61.6 127 31.5
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 7.8e-08 61.2 137 32.8
SHI21691 Sapria himalayana HOM05D000616 ORTHO05D000233 7.8e-08 61.2 140 34.3
CANSAT80G0158 Cannabis sativa HOM05D000539 ORTHO05D000233 1.0e-07 60.8 139 30.9
FvH4_5g23293 Fragaria vesca HOM05D000539 ORTHO05D000233 1.0e-07 60.8 113 35.4
SHI39953 Sapria himalayana HOM05D000616 ORTHO05D000233 1.0e-07 60.8 123 35.8
Ciclev10006905m.g Citrus clementina HOM05D000616 ORTHO05D000233 1.3e-07 60.5 143 34.3
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-07 60.5 127 28.3
SHI14215 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-07 60.5 126 30.2
SHI49342 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-07 60.5 137 34.3
FvH4_1g26740 Fragaria vesca HOM05D000539 ORTHO05D000592 1.7e-07 60.1 113 36.3
SHI08770 Sapria himalayana HOM05D000616 ORTHO05D000233 1.7e-07 60.1 137 32.8
SHI38530 Sapria himalayana HOM05D000616 ORTHO05D000233 1.7e-07 60.1 136 31.6
SHI48017 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-07 59.7 133 32.3
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 3.0e-07 59.3 147 27.9
SHI36734 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-07 59.3 137 32.1
SHI00366 Sapria himalayana HOM05D000616 ORTHO05D000233 3.9e-07 58.9 135 32.6
SHI28343 Sapria himalayana HOM05D000616 ORTHO05D000233 3.9e-07 58.9 128 30.5
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-07 58.5 140 29.3
SHI18332 Sapria himalayana HOM05D000616 ORTHO05D000233 6.6e-07 58.2 141 30.5
SHI22480 Sapria himalayana HOM05D000616 ORTHO05D000233 6.6e-07 58.2 137 29.9
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 8.6e-07 57.8 131 26.7
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 8.6e-07 57.8 105 37.1
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.6e-07 57.8 99 38.4
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.6e-07 57.8 99 38.4
SHI03572 Sapria himalayana HOM05D000616 ORTHO05D000233 8.6e-07 57.8 134 31.3
SHI39103 Sapria himalayana HOM05D000616 ORTHO05D000233 8.6e-07 57.8 137 30.7
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-06 57.4 137 32.8
SHI27548 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-06 57.4 137 32.1
SHI38698 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-06 57.4 136 30.9
SHI45621 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-06 57.0 96 36.5
SHI46871 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-06 57.0 137 32.1
SHI13009 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-06 56.6 143 30.8
SHI37660 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-06 56.6 127 30.7
FAN11G1109 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-06 56.2 120 32.5
SHI35109 Sapria himalayana HOM05D000616 ORTHO05D000233 2.5e-06 56.2 102 34.3
SHI35046 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-06 55.8 95 33.7
FvH4_3g14361 Fragaria vesca HOM05D000539 ORTHO05D000233 4.3e-06 55.5 135 28.1
FvH4_7g02602 Fragaria vesca HOM05D000539 ORTHO05D000233 4.3e-06 55.5 135 28.1
FAN09G3363 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.3e-06 55.5 121 32.2
HanXRQChr09g0261111 Helianthus annuus HOM05D000539 ORTHO05D000233 4.3e-06 55.5 74 37.8
HanXRQChr14g0433191 Helianthus annuus HOM05D011335 ORTHO05D013889 4.3e-06 55.5 138 29.7
Lsat_1_v5_gn_4_132280 Lactuca sativa HOM05D000539 ORTHO05D000233 4.3e-06 55.5 47 51.1
Lj4g0022111 Lotus japonicus HOM05D019175 ORTHO05D018974 4.3e-06 55.5 143 29.4
SHI04228 Sapria himalayana HOM05D000616 ORTHO05D000233 4.3e-06 55.5 137 31.4
CANSAT01G0116 Cannabis sativa HOM05D000539 ORTHO05D000233 5.6e-06 55.1 128 31.2
SHI38283 Sapria himalayana HOM05D000616 ORTHO05D000233 5.6e-06 55.1 127 30.7
SHI39690 Sapria himalayana HOM05D000616 ORTHO05D000233 5.6e-06 55.1 133 32.3
SHI45134 Sapria himalayana HOM05D000616 ORTHO05D000233 5.6e-06 55.1 127 33.1
TPR.G30036 Trifolium pratense HOM05D007793 ORTHO05D010104 5.6e-06 55.1 111 34.2
SHI19610 Sapria himalayana HOM05D000616 ORTHO05D000233 7.3e-06 54.7 134 31.3
MELO3C031353.2 Cucumis melo HOM05D000539 ORTHO05D000233 9.5e-06 54.3 68 36.8
SHI14829 Sapria himalayana HOM05D000616 ORTHO05D000233 9.5e-06 54.3 134 30.6


User provided reference genes

Program Settings