Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4418 Papaver somniferum HOM05D007689 ORTHO05D009701 2.0e-152 542.3 267 100.0
PSO407G0153 Papaver somniferum HOM05D007689 ORTHO05D009701 1.7e-114 416.4 238 89.1
PSO675G8711 Papaver somniferum HOM05D007689 ORTHO05D009701 8.1e-101 370.9 241 79.7
PSO541G3971 Papaver somniferum HOM05D007689 ORTHO05D009701 1.4e-100 370.2 241 79.3
TAR362G1121 Trochodendron aralioides HOM05D007689 ORTHO05D009701 1.8e-76 290.0 247 62.3
Nn3g21610 Nelumbo nucifera HOM05D007689 ORTHO05D009701 4.9e-74 282.0 241 60.2
Lj3C827T12 Lonicera japonica HOM05D007689 ORTHO05D009701 8.4e-74 281.2 241 61.8
Nn4g25673 Nelumbo nucifera HOM05D007689 ORTHO05D009701 1.6e-72 276.9 244 60.7
QL12p028868 Quercus lobata HOM05D007689 ORTHO05D009701 2.7e-72 276.2 245 57.1
QL12p028845 Quercus lobata HOM05D007689 ORTHO05D009701 1.0e-71 274.2 244 56.6
Aqoxy2G02828 Aquilegia oxysepala HOM05D007689 ORTHO05D009701 8.7e-71 271.2 248 59.3
DCAR_027020 Daucus carota HOM05D007689 ORTHO05D009701 7.3e-70 268.1 243 60.1
Gohir.D07G131100 Gossypium hirsutum HOM05D007689 ORTHO05D009701 7.3e-70 268.1 215 61.4
Gorai.001G142200 Gossypium raimondii HOM05D007689 ORTHO05D009701 7.3e-70 268.1 215 61.4
Haze_04999 Corylus avellana HOM05D007689 ORTHO05D009701 1.3e-69 267.3 247 55.9
Cfa005850 Carpinus fangiana HOM05D007689 ORTHO05D009701 1.6e-69 266.9 247 55.5
CiPaw.07G114300 Carya illinoinensis HOM05D007689 ORTHO05D009701 3.1e-68 262.7 245 57.1
Thecc.01G308800 Theobroma cacao HOM05D007689 ORTHO05D009701 3.1e-68 262.7 217 59.9
CiPaw.08G092000 Carya illinoinensis HOM05D007689 ORTHO05D009701 4.0e-68 262.3 238 56.3
CSS0014112 Camellia sinensis var. sinensis HOM05D007689 ORTHO05D009701 9.0e-68 261.2 213 61.5
Nitab4.5_0001097g0080 Nicotiana tabacum HOM05D007689 ORTHO05D009701 9.9e-67 257.7 231 57.6
CANSAT25G0084 Cannabis sativa HOM05D007689 ORTHO05D009701 3.8e-66 255.8 244 54.5
Hma1.2p1_0013F.1_g008950 Hydrangea macrophylla HOM05D007689 ORTHO05D009701 6.4e-66 255.0 244 57.0
Sopen05g032890 Solanum pennellii HOM05D007689 ORTHO05D009701 8.4e-66 254.6 206 60.7
CSS0034368 Camellia sinensis var. sinensis HOM05D007689 ORTHO05D009701 1.1e-65 254.2 242 53.7
Duzib138G0701 Durio zibethinus HOM05D007689 ORTHO05D009701 1.4e-65 253.8 215 58.6
Solyc05g054405.1 Solanum lycopersicum HOM05D007689 ORTHO05D009701 1.9e-65 253.4 227 57.7
Actinidia40349 Actinidia chinensis HOM05D007689 ORTHO05D009701 2.4e-65 253.1 239 56.5
Peaxi162Scf00102g00110 Petunia axillaris HOM05D007689 ORTHO05D009701 3.2e-65 252.7 206 59.7
Manes.01G224500 Manihot esculenta HOM05D007689 ORTHO05D009701 4.2e-65 252.3 238 54.2
Atru.chr5.1063 Acer truncatum HOM05D007689 ORTHO05D009701 5.5e-65 251.9 246 54.1
Duzib133G1147 Durio zibethinus HOM05D007689 ORTHO05D009701 7.1e-65 251.5 211 58.3
Migut.G00105 Erythranthe guttata HOM05D007689 ORTHO05D009701 7.1e-65 251.5 230 57.4
Gohir.A12G127300 Gossypium hirsutum HOM05D007689 ORTHO05D009701 1.2e-64 250.8 217 56.7
PGSC0003DMG402023433 Solanum tuberosum HOM05D007689 ORTHO05D009701 1.2e-64 250.8 227 56.4
Rhsim01G0288800 Rhododendron simsii HOM05D007689 ORTHO05D009701 1.6e-64 250.4 241 56.0
SalBow8G2262 Salvia bowleyana HOM05D007689 ORTHO05D009701 2.1e-64 250.0 221 57.9
Eucgr.K03520 Eucalyptus grandis HOM05D007689 ORTHO05D009701 4.6e-64 248.8 271 47.2
Potri.002G199700 Populus trichocarpa HOM05D007689 ORTHO05D009701 4.6e-64 248.8 212 59.0
Potri.014G124300 Populus trichocarpa HOM05D007689 ORTHO05D009701 6.0e-64 248.4 211 58.3
SalBow8G1378 Salvia bowleyana HOM05D007689 ORTHO05D009701 6.0e-64 248.4 221 57.5
Gorai.008G142100 Gossypium raimondii HOM05D007689 ORTHO05D009701 7.9e-64 248.1 217 56.7
Gohir.D12G130800 Gossypium hirsutum HOM05D007689 ORTHO05D009701 1.0e-63 247.7 217 56.2
Dinv33094 Davidia involucrata HOM05D007689 ORTHO05D009701 3.0e-63 246.1 231 53.7
Sabra14G0092400 Salix brachista HOM05D007689 ORTHO05D009701 5.1e-63 245.4 211 57.3
vmacro02420 Vaccinium macrocarpon HOM05D007689 ORTHO05D009701 6.7e-63 245.0 217 57.1
Nitab4.5_0000116g0110 Nicotiana tabacum HOM05D007689 ORTHO05D009701 8.7e-63 244.6 229 52.4
MBI18_g04585_MAGBIO Magnolia biondii HOM05D007689 ORTHO05D009701 1.5e-62 243.8 243 56.0
COL.COLO4_23276 Corchorus olitorius HOM05D007689 ORTHO05D009701 2.5e-62 243.0 218 55.5
Cpa.g.sc151.52 Carica papaya HOM05D007689 ORTHO05D009701 5.6e-62 241.9 245 50.2
TWI36G0491 Tripterygium wilfordii HOM05D007689 ORTHO05D009701 1.6e-61 240.4 244 50.8
MSTRG.10131 Avicennia marina HOM05D007689 ORTHO05D009701 3.7e-61 239.2 210 58.1
Peaxi162Scf00001g00284 Petunia axillaris HOM05D007689 ORTHO05D009701 6.2e-61 238.4 235 52.3
Hma1.2p1_0212F.1_g090150 Hydrangea macrophylla HOM05D007689 ORTHO05D009701 3.1e-60 236.1 240 52.1
Ciclev10020446m.g Citrus clementina HOM05D007689 ORTHO05D009701 4.0e-60 235.7 244 52.0
EL10Ac7g17615 Beta vulgaris HOM05D007689 ORTHO05D009701 9.0e-60 234.6 211 58.3
Nitab4.5_0004002g0030 Nicotiana tabacum HOM05D007689 ORTHO05D009701 1.2e-59 234.2 229 50.2
Ah.15g092850 Amaranthus hybridus HOM05D007689 ORTHO05D009701 6.5e-58 228.4 215 55.3
PGR044G1870 Punica granatum HOM05D007689 ORTHO05D009701 1.1e-57 227.6 243 50.6
Actinidia25831 Actinidia chinensis HOM05D007689 ORTHO05D009701 1.4e-57 227.3 206 56.3
AUR62008746 Chenopodium quinoa HOM05D007689 ORTHO05D009701 4.2e-57 225.7 211 53.6
MD03G1298300 Malus domestica HOM05D007689 ORTHO05D009701 7.1e-57 224.9 273 48.7
Lj2A1202T18 Lonicera japonica HOM05D007689 ORTHO05D009701 1.2e-56 224.2 247 49.4
AUR62025494 Chenopodium quinoa HOM05D007689 ORTHO05D009701 7.9e-56 221.5 215 51.6
Sc05g0003280 Simmondsia chinensis HOM05D007689 ORTHO05D009701 8.7e-55 218.0 215 53.5
Lsat_1_v5_gn_6_19380 Lactuca sativa HOM05D007689 ORTHO05D009701 2.5e-54 216.5 213 53.1
HPP92_015998 Vanilla planifolia HOM05D007689 ORTHO05D009701 3.7e-53 212.6 243 47.3
Prupe.8G269000 Prunus persica HOM05D007689 ORTHO05D009701 6.3e-53 211.8 260 47.3
SalBow8G1534 Salvia bowleyana HOM05D007689 ORTHO05D009701 6.3e-53 211.8 237 51.5
SalBow8G3879 Salvia bowleyana HOM05D007689 ORTHO05D009701 6.3e-53 211.8 237 51.5
CAN.G668.28 Capsicum annuum HOM05D007689 ORTHO05D009701 1.8e-52 210.3 191 55.5
HanXRQChr02g0049031 Helianthus annuus HOM05D007689 ORTHO05D009701 1.8e-52 210.3 221 52.0
Cc03_g01200 Coffea canephora HOM05D007689 ORTHO05D009701 6.9e-52 208.4 181 57.5
PGR004G0783 Punica granatum HOM05D007689 ORTHO05D009701 1.2e-51 207.6 176 59.7
HanXRQChr02g0049021 Helianthus annuus HOM05D007689 ORTHO05D009701 5.9e-51 205.3 212 50.5
FAN08G2552 Fragaria x ananassa HOM05D007689 ORTHO05D009701 3.2e-49 199.5 267 44.6
FAN18G1969 Fragaria x ananassa HOM05D007689 ORTHO05D009701 3.2e-49 199.5 267 44.6
FAN18G2820 Fragaria x ananassa HOM05D007689 ORTHO05D009701 3.2e-49 199.5 267 44.6
FvH4_5g39660 Fragaria vesca HOM05D007689 ORTHO05D009701 5.5e-49 198.7 267 44.6
RcHm_v2.0_Chr7g0241971 Rosa chinensis HOM05D007689 ORTHO05D009701 9.3e-49 198.0 266 45.1
ECA233G6144 Erigeron canadensis HOM05D007689 ORTHO05D009701 2.3e-47 193.4 171 57.9
Solyc09g075620.3 Solanum lycopersicum HOM05D007689 ORTHO05D009701 3.0e-47 193.0 181 55.2
Sopen09g030420 Solanum pennellii HOM05D007689 ORTHO05D009701 2.5e-46 189.9 181 54.7
Ah.08g213490 Amaranthus hybridus HOM05D007689 ORTHO05D009701 3.1e-44 183.0 240 44.6
Actinidia21015 Actinidia chinensis HOM05D007689 ORTHO05D009701 9.4e-41 171.4 137 62.0
CAN.G1013.34 Capsicum annuum HOM05D007689 ORTHO05D009701 2.1e-40 170.2 150 56.0
GSVIVG01028077001 Vitis vinifera HOM05D007689 ORTHO05D009701 4.3e-38 162.5 143 62.2
Eucgr.H04024 Eucalyptus grandis HOM05D007689 ORTHO05D009701 7.7e-35 151.8 145 54.5
Oeu016478.1 Olea europaea HOM05D007689 ORTHO05D009701 7.2e-33 145.2 133 60.9
Nitab4.5_0005180g0050 Nicotiana tabacum HOM05D007689 ORTHO05D009701 8.8e-31 138.3 133 57.1
vmacro15126 Vaccinium macrocarpon HOM05D007689 ORTHO05D009701 5.2e-23 112.5 174 42.0
Sabra02G0158700 Salix brachista HOM05D007689 ORTHO05D009701 1.8e-20 104.0 188 35.1
ClCG09G008710 Citrullus lanatus HOM05D006751 ORTHO05D008710 5.2e-15 85.9 202 29.2
CsaV3_7G026250 Cucumis sativus L. HOM05D006751 ORTHO05D008710 1.2e-14 84.7 193 29.0
Pp3c21_18970 Physcomitrium patens HOM05D006751 ORTHO05D008710 1.5e-14 84.3 170 30.0
VMungo1383G3158 Vigna mungo HOM05D006751 ORTHO05D008710 4.4e-14 82.8 228 26.3
MELO3C021072.2 Cucumis melo HOM05D006751 ORTHO05D008710 5.7e-14 82.4 227 27.8
Solyc06g083220.3 Solanum lycopersicum HOM05D006751 ORTHO05D008710 2.2e-13 80.5 187 30.5
AL9U11370 Arabidopsis lyrata HOM05D006751 ORTHO05D008710 3.7e-13 79.7 196 27.6
Nitab4.5_0003020g0170 Nicotiana tabacum HOM05D006751 ORTHO05D008710 3.7e-13 79.7 193 31.1
Sed0014566 Sechium edule HOM05D006751 ORTHO05D008710 3.7e-13 79.7 177 29.9
AT4G13030 Arabidopsis thaliana HOM05D006751 ORTHO05D008710 1.1e-12 78.2 210 28.6
Sopen06g034610 Solanum pennellii HOM05D006751 ORTHO05D008710 1.4e-12 77.8 170 31.8
Peaxi162Scf01312g00069 Petunia axillaris HOM05D006751 ORTHO05D008710 4.1e-12 76.3 171 29.8
PGSC0003DMG400020172 Solanum tuberosum HOM05D006751 ORTHO05D008710 4.1e-12 76.3 187 30.5
Hma1.2p1_0149F.1_g066540 Hydrangea macrophylla HOM05D006751 ORTHO05D008710 7.0e-12 75.5 184 29.3
Aqoxy2G03936 Aquilegia oxysepala HOM05D006751 ORTHO05D008710 1.6e-11 74.3 188 29.3
Peaxi162Scf01312g00068 Petunia axillaris HOM05D006751 ORTHO05D008710 2.0e-11 73.9 194 29.9
Medtr7g055730 Medicago truncatula HOM05D006751 ORTHO05D008710 2.7e-11 73.6 206 28.2
Phvul.008G132700 Phaseolus vulgaris HOM05D006751 ORTHO05D008710 2.7e-11 73.6 190 27.9
Lj1g0007193 Lotus japonicus HOM05D006751 ORTHO05D008710 3.5e-11 73.2 199 28.1
Lsat_1_v5_gn_9_17301 Lactuca sativa HOM05D006751 ORTHO05D008710 5.9e-11 72.4 186 29.6
Dinv28842 Davidia involucrata HOM05D006751 ORTHO05D008710 1.0e-10 71.6 190 28.9
PSO017G4001 Papaver somniferum HOM05D006751 ORTHO05D008710 1.0e-10 71.6 176 29.5
Carub.0007s2974 Capsella rubella HOM05D006751 ORTHO05D008710 1.3e-10 71.2 192 27.1
Cc01_g16530 Coffea canephora HOM05D006751 ORTHO05D008710 1.3e-10 71.2 186 29.0
HanXRQChr07g0193061 Helianthus annuus HOM05D006751 ORTHO05D008710 1.7e-10 70.9 174 27.0
Potri.002G247400 Populus trichocarpa HOM05D006751 ORTHO05D008710 1.7e-10 70.9 146 29.5
Medtr7g055720 Medicago truncatula HOM05D006751 ORTHO05D008710 2.2e-10 70.5 183 29.0
Nn1g08194 Nelumbo nucifera HOM05D006751 ORTHO05D008710 2.2e-10 70.5 186 28.5
Glyma.18G158800 Glycine max HOM05D006751 ORTHO05D008710 2.9e-10 70.1 205 28.3
Thecc.01G216600 Theobroma cacao HOM05D006751 ORTHO05D008710 2.9e-10 70.1 172 27.3
Actinidia09459 Actinidia chinensis HOM05D006751 ORTHO05D008710 5.0e-10 69.3 195 27.2
Rhsim01G0251000 Rhododendron simsii HOM05D006751 ORTHO05D008710 5.0e-10 69.3 174 29.3
SEGI_02078 Sequoiadendron giganteum HOM05D006751 ORTHO05D008710 5.0e-10 69.3 172 29.1
MSTRG.18827 Avicennia marina HOM05D006751 ORTHO05D008710 6.5e-10 68.9 250 28.0
FvH4_2g18360 Fragaria vesca HOM05D006751 ORTHO05D008710 6.5e-10 68.9 175 30.9
Actinidia23767 Actinidia chinensis HOM05D006751 ORTHO05D008710 1.1e-09 68.2 174 28.7
Gorai.007G157000 Gossypium raimondii HOM05D006751 ORTHO05D008710 1.9e-09 67.4 265 27.2
MBI16_g06251_MAGBIO Magnolia biondii HOM05D006751 ORTHO05D008710 1.9e-09 67.4 195 23.1
Manes.12G049300 Manihot esculenta HOM05D006751 ORTHO05D008710 2.5e-09 67.0 175 27.4
Sp7g10140 Schrenkiella parvula HOM05D006751 ORTHO05D008710 2.5e-09 67.0 164 27.4
CiPaw.13G050300 Carya illinoinensis HOM05D006751 ORTHO05D008710 4.2e-09 66.2 195 27.7
FvH4_2g18361 Fragaria vesca HOM05D006751 ORTHO05D008710 4.2e-09 66.2 176 29.0
Ca_07507_v3 Cicer arietinum L. HOM05D006751 ORTHO05D008710 5.5e-09 65.9 204 27.5
PSO063G4788 Papaver somniferum HOM05D006751 ORTHO05D008710 5.5e-09 65.9 176 29.0
QL09p049892 Quercus lobata HOM05D006751 ORTHO05D008710 5.5e-09 65.9 211 28.0
RcHm_v2.0_Chr6g0283741 Rosa chinensis HOM05D006751 ORTHO05D008710 5.5e-09 65.9 216 27.8
CARHR218330 Cardamine hirsuta HOM05D006751 ORTHO05D008710 7.2e-09 65.5 244 27.0
Duzib133G0478 Durio zibethinus HOM05D006751 ORTHO05D008710 7.2e-09 65.5 216 25.9
Sc17g0001950 Simmondsia chinensis HOM05D006751 ORTHO05D009307 7.2e-09 65.5 211 25.1
TWI18G0571 Tripterygium wilfordii HOM05D006751 ORTHO05D008710 7.2e-09 65.5 153 30.1
DCAR_012676 Daucus carota HOM05D006751 ORTHO05D008710 9.4e-09 65.1 175 26.3
arahy.Tifrunner.gnm1.ann1.5UHD3M Arachis hypogaea HOM05D006751 ORTHO05D008710 1.2e-08 64.7 189 27.5
THA.LOC104821658 Tarenaya hassleriana HOM05D006751 ORTHO05D008710 1.2e-08 64.7 220 26.8
ATR0681G155 Amborella trichopoda HOM05D006751 ORTHO05D008710 1.6e-08 64.3 182 29.1
A08p07190 Brassica napus HOM05D006751 ORTHO05D008710 1.6e-08 64.3 185 24.3
BraA08t32731Z Brassica rapa HOM05D006751 ORTHO05D008710 1.6e-08 64.3 185 24.3
Cfa010403 Carpinus fangiana HOM05D006751 ORTHO05D008710 1.6e-08 64.3 201 25.4
TAR636G1901 Trochodendron aralioides HOM05D006751 ORTHO05D008710 1.6e-08 64.3 178 27.0
GSVIVG01004748001 Vitis vinifera HOM05D006751 ORTHO05D008710 1.6e-08 64.3 177 26.0
BcaC07g37406 Brassica carinata HOM05D006751 ORTHO05D008710 2.1e-08 63.9 185 24.3
C08p08830 Brassica napus HOM05D006751 ORTHO05D008710 2.1e-08 63.9 185 24.3
BolC8t47729H Brassica oleracea HOM05D006751 ORTHO05D008710 2.1e-08 63.9 185 24.3
MD10G1157500 Malus domestica HOM05D006751 ORTHO05D008710 2.7e-08 63.5 187 26.7
vmacro14722 Vaccinium macrocarpon HOM05D006751 ORTHO05D008710 2.7e-08 63.5 174 27.6
AUR62016527 Chenopodium quinoa HOM05D006751 ORTHO05D008710 3.6e-08 63.2 190 26.8
Gohir.A11G140300 Gossypium hirsutum HOM05D006751 ORTHO05D008710 3.6e-08 63.2 188 28.2
arahy.Tifrunner.gnm1.ann1.HN87AT Arachis hypogaea HOM05D006751 ORTHO05D008710 4.7e-08 62.8 189 27.0
Cpa.g.sc8.122 Carica papaya HOM05D006751 ORTHO05D008710 4.7e-08 62.8 190 24.2
EL10Ac7g17934 Beta vulgaris HOM05D006751 ORTHO05D008710 6.1e-08 62.4 240 25.0
Gohir.D11G146600 Gossypium hirsutum HOM05D006751 ORTHO05D008710 6.1e-08 62.4 266 27.4
AUR62001149 Chenopodium quinoa HOM05D006751 ORTHO05D008710 1.0e-07 61.6 184 28.8
MD05G1169200 Malus domestica HOM05D006751 ORTHO05D008710 1.0e-07 61.6 191 26.2
Prupe.8G196400 Prunus persica HOM05D006751 ORTHO05D008710 1.0e-07 61.6 177 27.1
TPR.G29151 Trifolium pratense HOM05D006751 ORTHO05D008710 1.0e-07 61.6 186 29.0
FAN24G0495 Fragaria x ananassa HOM05D006751 ORTHO05D008710 2.3e-07 60.5 155 31.0
PGR083G0288 Punica granatum HOM05D006751 ORTHO05D008710 3.0e-07 60.1 177 27.7
Sabra02G0188300 Salix brachista HOM05D006751 ORTHO05D008710 3.0e-07 60.1 126 31.0
TPR.G28325 Trifolium pratense HOM05D006751 ORTHO05D008710 3.0e-07 60.1 183 26.8
Oeu003263.2 Olea europaea HOM05D006751 ORTHO05D008710 4.0e-07 59.7 169 26.0
BcaB04g17726 Brassica carinata HOM05D006751 ORTHO05D008710 5.2e-07 59.3 172 25.6
Ciclev10020463m.g Citrus clementina HOM05D006751 ORTHO05D008710 5.2e-07 59.3 160 26.2
Dinv02070 Davidia involucrata HOM05D007689 ORTHO05D009701 6.8e-07 58.9 167 35.3
Migut.D02514 Erythranthe guttata HOM05D006751 ORTHO05D008710 6.8e-07 58.9 181 30.4
Eucgr.H00756 Eucalyptus grandis HOM05D006751 ORTHO05D008710 6.8e-07 58.9 176 27.3
FAN15G3221 Fragaria x ananassa HOM05D006751 ORTHO05D008710 1.5e-06 57.8 182 26.9
Hund05587 Selenicereus undatus HOM05D006751 ORTHO05D008710 4.4e-06 56.2 253 25.7
Thecc.01G216700 Theobroma cacao HOM05D006751 ORTHO05D008710 5.7e-06 55.8 175 28.0
COL.COLO4_16111 Corchorus olitorius HOM05D006751 ORTHO05D008710 9.8e-06 55.1 177 27.7


User provided reference genes

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