Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 0.0e+00 1576.6 797 100.0
PSO063G3570 Papaver somniferum HOM05D005777 ORTHO05D006854 7.6e-139 498.8 261 95.8
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 2.3e-87 327.8 826 33.3
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 2.7e-75 287.7 802 30.9
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 1.3e-74 285.4 723 33.2
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 2.9e-69 267.7 381 41.2
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 5.6e-65 253.4 404 36.6
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.8e-63 248.4 425 38.1
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 1.5e-62 245.4 396 37.9
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 4.4e-62 243.8 429 36.1
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 1.3e-61 242.3 426 37.6
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.9e-61 241.1 393 37.9
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-60 238.8 383 38.6
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 1.2e-59 235.7 716 30.0
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 2.1e-59 235.0 415 35.9
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 3.5e-59 234.2 400 35.2
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 4.6e-59 233.8 398 34.9
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 6.0e-59 233.4 388 36.1
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-58 232.3 383 38.6
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.3e-58 231.5 447 36.5
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.6e-58 229.9 388 37.1
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 8.6e-58 229.6 399 38.6
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 2.5e-57 228.0 392 36.7
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 3.3e-57 227.6 386 36.0
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.2e-56 225.7 406 36.9
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.1e-56 224.9 593 30.5
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 4.7e-56 223.8 413 36.8
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 6.2e-56 223.4 387 35.7
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 8.1e-56 223.0 403 35.7
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 8.1e-56 223.0 567 31.7
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 1.1e-55 222.6 453 35.1
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 1.8e-55 221.9 373 36.7
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 2.4e-55 221.5 450 33.1
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 4.0e-55 220.7 390 34.1
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 8.9e-55 219.5 394 34.8
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 1.2e-54 219.2 435 33.8
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.0e-54 218.4 555 30.1
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 2.6e-54 218.0 397 34.8
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 2.6e-54 218.0 396 35.9
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 6.4e-53 213.4 594 30.1
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 8.4e-53 213.0 402 34.3
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.4e-52 212.2 387 33.6
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 5.4e-52 210.3 392 34.7
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 1.2e-51 209.1 372 34.4
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 2.1e-51 208.4 378 34.4
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 3.5e-51 207.6 381 35.2
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 2.3e-50 204.9 457 31.3
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 6.2e-48 196.8 425 31.8
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.4e-47 195.7 381 33.3
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 2.0e-46 191.8 595 29.6
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 3.4e-46 191.0 241 44.4
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.7e-45 188.7 359 34.3
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 8.4e-45 186.4 279 40.1
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 2.4e-44 184.9 404 32.2
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 7.1e-44 183.3 252 42.9
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 6.0e-43 180.3 240 44.2
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 2.3e-42 178.3 243 42.4
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 2.3e-42 178.3 393 33.3
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 3.3e-41 174.5 237 40.1
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 4.3e-41 174.1 251 39.8
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 6.2e-40 170.2 357 31.1
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 4.0e-39 167.5 385 29.9
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 4.0e-39 167.5 240 42.1
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 5.3e-39 167.2 240 40.4
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 9.0e-39 166.4 244 40.2
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.9e-38 162.9 260 41.2
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.2e-37 161.8 653 26.8
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 8.4e-37 159.8 402 29.4
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 1.9e-36 158.7 241 37.8
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.5e-33 148.3 368 30.4
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 2.1e-32 145.2 222 36.9
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-31 142.5 418 28.9
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 2.4e-31 141.7 248 33.9
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 5.8e-30 137.1 210 37.1
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 4.9e-29 134.0 90 78.9
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.5e-27 127.9 201 37.8
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.9e-26 124.4 209 36.4
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 5.7e-25 120.6 239 29.7
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 1.3e-24 119.4 158 39.2
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.6e-24 119.0 294 31.3
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 2.8e-24 118.2 207 31.9
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 4.8e-24 117.5 240 30.0
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 6.9e-23 113.6 201 35.3
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 1.2e-22 112.8 186 37.6
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 1.3e-21 109.4 87 60.9
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.2e-20 104.8 155 39.4
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 3.0e-18 98.2 262 31.3
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.7e-17 93.2 109 49.5
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.7e-16 91.3 81 50.6
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.8e-16 90.9 73 54.8
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.8e-16 90.9 73 54.8
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.8e-16 90.9 76 53.9
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 6.3e-16 90.5 70 58.6
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-15 89.4 164 36.0
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-15 88.6 166 35.5
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.1e-15 87.8 164 35.4
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 5.3e-15 87.4 84 51.2
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.1e-15 86.7 164 35.4
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 2.0e-14 85.5 84 47.6
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 2.0e-14 85.5 133 37.6
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.5e-14 84.3 72 52.8
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 5.9e-14 84.0 119 39.5
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 5.9e-14 84.0 88 43.2
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.3e-13 82.8 84 47.6
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.3e-13 82.8 84 47.6
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.3e-13 82.8 70 54.3
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.2e-13 82.0 206 28.2
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 3.8e-13 81.3 131 36.6
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 3.8e-13 81.3 98 42.9
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 3.8e-13 81.3 72 52.8
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 5.0e-13 80.9 88 43.2
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 5.0e-13 80.9 91 47.3
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.4e-12 79.3 72 51.4
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 4.2e-12 77.8 98 41.8
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 4.6e-11 74.3 70 48.6
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.0e-10 73.2 91 40.7
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-08 65.9 73 41.1
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 2.2e-08 65.5 73 41.1
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 2.4e-07 62.0 216 25.9
Aqoxy5G04313 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 5.9e-06 57.4 287 27.5


User provided reference genes

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