Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4274 Papaver somniferum HOM05D001280 ORTHO05D001125 1.3e-111 406.4 204 100.0
PSO700G0376 Papaver somniferum HOM05D001280 ORTHO05D001125 2.2e-42 176.4 230 46.1
PSO170G5556 Papaver somniferum HOM05D001280 ORTHO05D001125 6.7e-39 164.9 231 45.5
Dinv39508 Davidia involucrata HOM05D001280 ORTHO05D001125 6.3e-13 78.6 130 40.0
PSO541G1445 Papaver somniferum HOM05D001280 ORTHO05D001125 4.5e-11 72.4 121 37.2
PSO675G5117 Papaver somniferum HOM05D001280 ORTHO05D001125 4.5e-11 72.4 121 37.2
arahy.Tifrunner.gnm1.ann1.SYM4DV Arachis hypogaea HOM05D001280 ORTHO05D001125 7.7e-11 71.6 178 33.1
TAR381G1524 Trochodendron aralioides HOM05D001280 ORTHO05D001125 7.7e-11 71.6 173 35.3
TAR628G1414 Trochodendron aralioides HOM05D001280 ORTHO05D001125 7.7e-11 71.6 122 37.7
arahy.Tifrunner.gnm1.ann1.29VQUK Arachis hypogaea HOM05D001280 ORTHO05D001125 1.3e-10 70.9 178 32.6
Dinv31834 Davidia involucrata HOM05D001280 ORTHO05D001125 1.3e-10 70.9 132 35.6
Duzib116G0879 Durio zibethinus HOM05D001280 ORTHO05D001125 1.7e-10 70.5 175 34.3
GSVIVG01009889001 Vitis vinifera HOM05D001280 ORTHO05D001125 1.7e-10 70.5 124 39.5
Psat5g013400 Pisum sativum HOM05D001280 ORTHO05D001125 2.9e-10 69.7 216 30.6
TPR.G34543 Trifolium pratense HOM05D001280 ORTHO05D001125 5.0e-10 68.9 186 32.3
Phvul.001G007300 Phaseolus vulgaris HOM05D001280 ORTHO05D001125 6.5e-10 68.6 184 32.1
Migut.O00764 Erythranthe guttata HOM05D001280 ORTHO05D001125 8.5e-10 68.2 198 31.3
Nitab4.5_0001540g0060 Nicotiana tabacum HOM05D001280 ORTHO05D001125 1.1e-09 67.8 185 31.9
MSTRG.1200 Avicennia marina HOM05D001280 ORTHO05D001125 1.5e-09 67.4 135 37.0
TAR376G1133 Trochodendron aralioides HOM05D001280 ORTHO05D001125 1.5e-09 67.4 121 38.8
Cfa013939 Carpinus fangiana HOM05D001280 ORTHO05D001125 2.5e-09 66.6 128 35.9
MELO3C003758.2 Cucumis melo HOM05D001280 ORTHO05D001125 2.5e-09 66.6 115 37.4
CsaV3_3G045780 Cucumis sativus L. HOM05D001280 ORTHO05D001125 2.5e-09 66.6 115 37.4
Lalb_Chr23g0266171 Lupinus albus HOM05D001280 ORTHO05D001125 2.5e-09 66.6 126 37.3
Potri.002G023500 Populus trichocarpa HOM05D001280 ORTHO05D001125 2.5e-09 66.6 199 30.2
Atru.chr13.310 Acer truncatum HOM05D001280 ORTHO05D001125 3.2e-09 66.2 119 36.1
Ah.11g039090 Amaranthus hybridus HOM05D001280 ORTHO05D001125 3.2e-09 66.2 104 37.5
Migut.N03154 Erythranthe guttata HOM05D001280 ORTHO05D001125 3.2e-09 66.2 199 29.6
Lj5g0026558 Lotus japonicus HOM05D001280 ORTHO05D001125 3.2e-09 66.2 170 32.9
Sc02g0008540 Simmondsia chinensis HOM05D001280 ORTHO05D001125 3.2e-09 66.2 121 35.5
Actinidia15415 Actinidia chinensis HOM05D001280 ORTHO05D001125 4.2e-09 65.9 110 39.1
Hma1.2p1_0023F.1_g015420 Hydrangea macrophylla HOM05D001280 ORTHO05D001125 4.2e-09 65.9 164 32.3
vmacro21721 Vaccinium macrocarpon HOM05D001280 ORTHO05D001125 4.2e-09 65.9 134 34.3
CiPaw.08G065600 Carya illinoinensis HOM05D001280 ORTHO05D001125 5.5e-09 65.5 167 30.5
Oeu054700.1 Olea europaea HOM05D001280 ORTHO05D001125 5.5e-09 65.5 129 39.5
Rhsim06G0022100 Rhododendron simsii HOM05D001280 ORTHO05D001125 5.5e-09 65.5 126 34.1
VMungo0647G1276 Vigna mungo HOM05D001280 ORTHO05D001125 5.5e-09 65.5 119 37.0
ClCG05G018340 Citrullus lanatus HOM05D001280 ORTHO05D001125 7.2e-09 65.1 115 37.4
Haze_22622 Corylus avellana HOM05D001280 ORTHO05D001125 7.2e-09 65.1 112 39.3
DCAR_017473 Daucus carota HOM05D001280 ORTHO05D001125 7.2e-09 65.1 139 31.7
Glyma.04G024900 Glycine max HOM05D001280 ORTHO05D001125 7.2e-09 65.1 135 36.3
Aqoxy7G02907 Aquilegia oxysepala HOM05D001280 ORTHO05D001125 9.4e-09 64.7 129 35.7
MBI05_g15345_MAGBIO Magnolia biondii HOM05D001280 ORTHO05D001125 9.4e-09 64.7 128 35.9
Sed0019508 Sechium edule HOM05D001280 ORTHO05D001125 9.4e-09 64.7 164 31.1
Aqoxy5G01771 Aquilegia oxysepala HOM05D001280 ORTHO05D001125 1.2e-08 64.3 167 32.3
Glyma.17G257500 Glycine max HOM05D001280 ORTHO05D001125 1.2e-08 64.3 123 37.4
TWI12G0248 Tripterygium wilfordii HOM05D001280 ORTHO05D001125 1.2e-08 64.3 123 36.6
CSS0016407 Camellia sinensis var. sinensis HOM05D001280 ORTHO05D001125 1.6e-08 63.9 121 35.5
AUR62033837 Chenopodium quinoa HOM05D001280 ORTHO05D001125 1.6e-08 63.9 123 35.8
Manes.05G148500 Manihot esculenta HOM05D001280 ORTHO05D001125 1.6e-08 63.9 179 32.4
Sabra02G0019100 Salix brachista HOM05D001280 ORTHO05D001125 1.6e-08 63.9 200 27.0
Cc10_g01780 Coffea canephora HOM05D001280 ORTHO05D001125 2.1e-08 63.5 170 33.5
Lalb_Chr22g0354361 Lupinus albus HOM05D001280 ORTHO05D001125 2.1e-08 63.5 114 36.8
CARHR181820 Cardamine hirsuta HOM05D001280 ORTHO05D001125 2.7e-08 63.2 131 34.4
Duzib041G0626 Durio zibethinus HOM05D001280 ORTHO05D001125 2.7e-08 63.2 129 38.8
Glyma.06G025000 Glycine max HOM05D001280 ORTHO05D001125 2.7e-08 63.2 166 34.3
AT5G42560 Arabidopsis thaliana HOM05D001280 ORTHO05D001125 3.6e-08 62.8 118 34.7
EL10Ac1g02287 Beta vulgaris HOM05D001280 ORTHO05D001125 3.6e-08 62.8 121 36.4
Carub.0008s0646 Capsella rubella HOM05D001280 ORTHO05D001125 3.6e-08 62.8 118 34.7
Ciclev10001859m.g Citrus clementina HOM05D001280 ORTHO05D001125 3.6e-08 62.8 122 32.8
Glyma.14G218400 Glycine max HOM05D001280 ORTHO05D001125 3.6e-08 62.8 119 36.1
Gohir.A06G004900 Gossypium hirsutum HOM05D001280 ORTHO05D001125 3.6e-08 62.8 110 38.2
CiPaw.07G151200 Carya illinoinensis HOM05D001280 ORTHO05D001125 4.7e-08 62.4 116 36.2
Thecc.08G042700 Theobroma cacao HOM05D001280 ORTHO05D001125 4.7e-08 62.4 178 31.5
TPR.G34333 Trifolium pratense HOM05D001280 ORTHO05D001125 4.7e-08 62.4 172 31.4
TWI36G1498 Tripterygium wilfordii HOM05D001280 ORTHO05D001125 4.7e-08 62.4 121 36.4
TWI56G1108 Tripterygium wilfordii HOM05D001280 ORTHO05D001125 4.7e-08 62.4 123 35.0
COL.COLO4_26160 Corchorus olitorius HOM05D001280 ORTHO05D001125 6.1e-08 62.0 137 34.3
Duzib093G0009 Durio zibethinus HOM05D001280 ORTHO05D001125 6.1e-08 62.0 131 34.4
Thhalv10019166m.g Eutrema salsugineum HOM05D001280 ORTHO05D001125 6.1e-08 62.0 112 35.7
Nitab4.5_0000192g0080 Nicotiana tabacum HOM05D001280 ORTHO05D001125 6.1e-08 62.0 185 27.0
unitig_46.g17965 Utricularia gibba HOM05D001280 ORTHO05D001125 6.1e-08 62.0 176 30.1
BcaC06g31754 Brassica carinata HOM05D001280 ORTHO05D001125 8.0e-08 61.6 129 34.1
Sp2g06930 Schrenkiella parvula HOM05D001280 ORTHO05D001125 8.0e-08 61.6 118 33.9
SpUn0014_0080 Schrenkiella parvula HOM05D001280 ORTHO05D001125 8.0e-08 61.6 118 33.9
SpUn0077_0010 Schrenkiella parvula HOM05D001280 ORTHO05D001125 8.0e-08 61.6 118 33.9
THA.LOC104813195 Tarenaya hassleriana HOM05D001280 ORTHO05D001125 8.0e-08 61.6 140 32.1
Carub.0002s2254 Capsella rubella HOM05D001280 ORTHO05D001125 1.0e-07 61.2 112 36.6
Gohir.A05G187100 Gossypium hirsutum HOM05D001280 ORTHO05D001125 1.0e-07 61.2 132 34.8
Gorai.010G005100 Gossypium raimondii HOM05D001280 ORTHO05D001125 1.0e-07 61.2 110 37.3
Lsat_1_v5_gn_2_8620 Lactuca sativa HOM05D001280 ORTHO05D001125 1.0e-07 61.2 110 35.5
AUR62035744 Chenopodium quinoa HOM05D001280 ORTHO05D001125 1.4e-07 60.8 110 38.2
Ca_15486_v3 Cicer arietinum L. HOM05D001280 ORTHO05D001125 1.4e-07 60.8 127 34.6
ECA233G2818 Erigeron canadensis HOM05D001280 ORTHO05D001125 1.4e-07 60.8 121 34.7
Migut.C00806 Erythranthe guttata HOM05D001280 ORTHO05D001125 1.4e-07 60.8 194 30.9
Gorai.009G195300 Gossypium raimondii HOM05D001280 ORTHO05D001125 1.4e-07 60.8 113 38.1
Lj4A26T47 Lonicera japonica HOM05D001280 ORTHO05D001125 1.4e-07 60.8 146 31.5
SGA_v2.0_scaffold11G05910 Striga asiatica HOM05D001280 ORTHO05D003147 1.4e-07 60.8 122 36.1
ATR0821G001 Amborella trichopoda HOM05D001280 ORTHO05D001125 1.8e-07 60.5 110 39.1
Phvul.009G016200 Phaseolus vulgaris HOM05D001280 ORTHO05D001125 1.8e-07 60.5 110 38.2
QL02p011393 Quercus lobata HOM05D001280 ORTHO05D001125 1.8e-07 60.5 113 37.2
Sc15g0005050 Simmondsia chinensis HOM05D001280 ORTHO05D001125 1.8e-07 60.5 110 37.3
Solyc04g081340.3 Solanum lycopersicum HOM05D001280 ORTHO05D001125 1.8e-07 60.5 129 34.9
Ca_13412_v3 Cicer arietinum L. HOM05D001280 ORTHO05D001125 2.3e-07 60.1 172 29.7
Eucgr.F00600 Eucalyptus grandis HOM05D001280 ORTHO05D001125 2.3e-07 60.1 222 26.6
Thhalv10003251m.g Eutrema salsugineum HOM05D001280 ORTHO05D001125 2.3e-07 60.1 146 30.8
Medtr3g113790 Medicago truncatula HOM05D001280 ORTHO05D001125 2.3e-07 60.1 119 34.5
Potri.004G166800 Populus trichocarpa HOM05D001280 ORTHO05D001125 2.3e-07 60.1 166 28.3
Sabra05G0183900 Salix brachista HOM05D001280 ORTHO05D001125 2.3e-07 60.1 117 34.2
Sed0003458 Sechium edule HOM05D001280 ORTHO05D001125 2.3e-07 60.1 110 37.3
arahy.Tifrunner.gnm1.ann1.1T1RVQ Arachis hypogaea HOM05D001280 ORTHO05D001125 3.0e-07 59.7 116 37.1
arahy.Tifrunner.gnm1.ann1.AUY1K1 Arachis hypogaea HOM05D001280 ORTHO05D001125 3.0e-07 59.7 116 37.1
Hund05203 Selenicereus undatus HOM05D001280 ORTHO05D001125 3.0e-07 59.7 110 37.3
ATR0650G003 Amborella trichopoda HOM05D001280 ORTHO05D001125 4.0e-07 59.3 110 38.2
A06p48290 Brassica napus HOM05D001280 ORTHO05D001125 4.0e-07 59.3 122 32.8
BraA06t27698Z Brassica rapa HOM05D001280 ORTHO05D001125 4.0e-07 59.3 122 32.8
DCAR_013861 Daucus carota HOM05D001280 ORTHO05D001125 4.0e-07 59.3 110 34.5
Peaxi162Scf00438g00624 Petunia axillaris HOM05D001280 ORTHO05D001125 4.0e-07 59.3 119 33.6
AL8G18750 Arabidopsis lyrata HOM05D001280 ORTHO05D001125 5.2e-07 58.9 123 34.1
BcaC02g10770 Brassica carinata HOM05D001280 ORTHO05D001125 5.2e-07 58.9 152 29.6
C04p25310 Brassica napus HOM05D001280 ORTHO05D001125 5.2e-07 58.9 152 29.6
BolC4t24036H Brassica oleracea HOM05D001280 ORTHO05D001125 5.2e-07 58.9 152 29.6
CAN.G311.19 Capsicum annuum HOM05D001280 ORTHO05D001125 5.2e-07 58.9 120 34.2
ECA238G0779 Erigeron canadensis HOM05D001280 ORTHO05D001125 5.2e-07 58.9 110 34.5
Gohir.D06G000700 Gossypium hirsutum HOM05D001280 ORTHO05D001125 5.2e-07 58.9 171 30.4
Manes.18G014500 Manihot esculenta HOM05D001280 ORTHO05D001125 5.2e-07 58.9 110 36.4
SGA_v2.0_scaffold12G05970 Striga asiatica HOM05D001280 ORTHO05D001125 5.2e-07 58.9 132 33.3
Cpa.g.sc1059.5 Carica papaya HOM05D001280 ORTHO05D001125 6.8e-07 58.5 107 36.4
HanXRQChr14g0430251 Helianthus annuus HOM05D001280 ORTHO05D001125 6.8e-07 58.5 108 36.1
Psat6g003840 Pisum sativum HOM05D001280 ORTHO05D001125 6.8e-07 58.5 126 34.1
THA.LOC104813790 Tarenaya hassleriana HOM05D001280 ORTHO05D001125 6.8e-07 58.5 160 29.4
Ah.05g166730 Amaranthus hybridus HOM05D001280 ORTHO05D001125 8.8e-07 58.2 113 33.6
Gohir.D05G190000 Gossypium hirsutum HOM05D001280 ORTHO05D001125 8.8e-07 58.2 113 37.2
Nn5g29334 Nelumbo nucifera HOM05D001280 ORTHO05D001125 8.8e-07 58.2 112 33.9
BcaC08g47051 Brassica carinata HOM05D001280 ORTHO05D001125 1.2e-06 57.8 147 29.9
BraA07t31657Z Brassica rapa HOM05D001280 ORTHO05D001125 1.5e-06 57.4 108 34.3
CSS0015407 Camellia sinensis var. sinensis HOM05D001280 ORTHO05D001125 1.5e-06 57.4 180 29.4
Thhalv10008288m.g Eutrema salsugineum HOM05D001280 ORTHO05D001125 1.5e-06 57.4 112 34.8
Manes.05G148550 Manihot esculenta HOM05D001280 ORTHO05D001125 1.5e-06 57.4 185 26.5
Sopen04g034960 Solanum pennellii HOM05D001280 ORTHO05D001125 1.5e-06 57.4 99 39.4
PGSC0003DMG400003727 Solanum tuberosum HOM05D001280 ORTHO05D001125 1.5e-06 57.4 119 36.1
HanXRQChr13g0386621 Helianthus annuus HOM05D001280 ORTHO05D001125 2.0e-06 57.0 110 37.3
Oeu007333.2 Olea europaea HOM05D001280 ORTHO05D001125 2.0e-06 57.0 99 38.4
Potri.005G237900 Populus trichocarpa HOM05D001280 ORTHO05D001125 2.0e-06 57.0 116 33.6
Aa31LG9G12640 Aethionema arabicum HOM05D001280 ORTHO05D001125 2.6e-06 56.6 110 36.4
Lalb_Chr14g0369821 Lupinus albus HOM05D001280 ORTHO05D001125 2.6e-06 56.6 191 29.8
Sp5g30810 Schrenkiella parvula HOM05D001280 ORTHO05D001125 2.6e-06 56.6 112 30.4
MSTRG.22338 Avicennia marina HOM05D001280 ORTHO05D001125 3.4e-06 56.2 123 35.8
MSTRG.25240 Avicennia marina HOM05D001280 ORTHO05D001125 3.4e-06 56.2 110 37.3
BcaC07g39011 Brassica carinata HOM05D001280 ORTHO05D001125 3.4e-06 56.2 112 33.9
BcaC08g47052 Brassica carinata HOM05D001280 ORTHO05D001125 3.4e-06 56.2 147 28.6
CDE05G2716 Ceratophyllum demersum HOM05D001280 ORTHO05D001125 3.4e-06 56.2 110 37.3
Nitab4.5_0002950g0030 Nicotiana tabacum HOM05D001280 ORTHO05D001125 3.4e-06 56.2 196 27.0
HPP92_025662 Vanilla planifolia HOM05D001280 ORTHO05D001125 3.4e-06 56.2 115 34.8
BcaB03g12890 Brassica carinata HOM05D001280 ORTHO05D001125 4.4e-06 55.8 112 33.9
Lsat_1_v5_gn_8_30500 Lactuca sativa HOM05D001280 ORTHO05D001125 4.4e-06 55.8 108 37.0
PGR031G1713 Punica granatum HOM05D001280 ORTHO05D001125 4.4e-06 55.8 99 39.4
AL2G35680 Arabidopsis lyrata HOM05D001280 ORTHO05D001125 5.7e-06 55.5 112 31.2
CARHR069100 Cardamine hirsuta HOM05D001280 ORTHO05D001125 5.7e-06 55.5 100 33.0
PSO782G2291 Papaver somniferum HOM05D001280 ORTHO05D001125 5.7e-06 55.5 170 27.6
THA.LOC104806889 Tarenaya hassleriana HOM05D001280 ORTHO05D001125 5.7e-06 55.5 167 31.1
AT1G75700 Arabidopsis thaliana HOM05D001280 ORTHO05D001125 7.5e-06 55.1 124 29.8
MBI17_g00991_MAGBIO Magnolia biondii HOM05D001280 ORTHO05D001125 7.5e-06 55.1 139 30.2
Aa31LG7G4430 Aethionema arabicum HOM05D001280 ORTHO05D001125 9.8e-06 54.7 112 34.8
A07p41220 Brassica napus HOM05D001280 ORTHO05D001125 9.8e-06 54.7 150 31.3
CDE05G3575 Ceratophyllum demersum HOM05D001280 ORTHO05D001125 9.8e-06 54.7 199 28.1
PGR083G1832 Punica granatum HOM05D001280 ORTHO05D001125 9.8e-06 54.7 110 33.6


User provided reference genes

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