Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 3.1e-79 298.5 164 100.0
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 7.2e-76 287.3 164 98.2
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 4.1e-39 165.2 166 59.6
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 6.0e-38 161.4 157 59.9
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 3.0e-37 159.1 156 59.0
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.5e-36 156.0 168 56.5
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.5e-36 156.0 168 56.5
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 1.6e-35 153.3 158 57.0
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 3.6e-35 152.1 166 55.4
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 4.0e-34 148.7 158 57.6
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 1.2e-33 147.1 154 56.5
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 3.4e-33 145.6 124 63.7
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 9.8e-33 144.1 158 57.6
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.7e-32 143.3 143 55.2
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 6.4e-32 141.4 157 54.8
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 1.1e-31 140.6 157 54.8
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.4e-31 140.2 144 57.6
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 1.4e-31 140.2 157 53.5
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 1.4e-31 140.2 157 54.8
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.9e-31 139.8 162 54.3
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 4.1e-31 138.7 157 54.1
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 4.1e-31 138.7 157 54.1
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 1.6e-30 136.7 156 53.2
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 4.6e-30 135.2 149 55.0
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 7.8e-30 134.4 158 52.5
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 1.0e-29 134.0 166 50.0
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.0e-29 134.0 129 56.6
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 3.0e-29 132.5 159 52.8
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 3.9e-29 132.1 156 52.6
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 5.0e-29 131.7 155 55.5
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 5.0e-29 131.7 189 46.6
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 6.6e-29 131.3 158 53.8
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 1.1e-28 130.6 152 52.6
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.5e-28 130.2 156 53.2
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 1.9e-28 129.8 160 51.2
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 1.9e-28 129.8 160 51.2
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 2.5e-28 129.4 160 51.2
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.5e-28 129.4 167 52.7
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 2.5e-28 129.4 116 63.8
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 2.5e-28 129.4 149 53.0
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.5e-28 129.4 139 56.1
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 2.5e-28 129.4 156 51.9
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 3.3e-28 129.0 160 51.2
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 3.3e-28 129.0 158 53.2
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 4.3e-28 128.6 159 50.3
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 4.3e-28 128.6 167 50.9
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 4.3e-28 128.6 154 50.6
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 4.3e-28 128.6 139 56.1
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 5.6e-28 128.3 157 54.1
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 7.3e-28 127.9 160 50.6
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 9.5e-28 127.5 137 52.6
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 1.2e-27 127.1 150 54.7
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.1e-27 126.3 134 58.2
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 2.8e-27 125.9 139 56.1
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 3.6e-27 125.6 165 51.5
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 4.7e-27 125.2 152 52.6
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 6.2e-27 124.8 157 51.0
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 6.2e-27 124.8 126 54.0
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 8.1e-27 124.4 160 50.0
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 1.1e-26 124.0 154 51.3
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 1.1e-26 124.0 165 49.1
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.4e-26 123.6 158 52.5
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.8e-26 123.2 170 51.8
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.8e-26 123.2 164 50.6
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 4.0e-26 122.1 158 51.3
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 5.2e-26 121.7 165 49.7
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 8.9e-26 120.9 131 56.5
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.2e-25 120.6 165 48.5
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 2.0e-25 119.8 192 42.2
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 2.0e-25 119.8 156 48.1
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 2.0e-25 119.8 164 47.6
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 2.6e-25 119.4 160 49.4
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 2.6e-25 119.4 140 52.9
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 3.4e-25 119.0 154 50.6
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 3.4e-25 119.0 151 49.7
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 3.4e-25 119.0 152 52.0
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 4.4e-25 118.6 165 49.1
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 4.4e-25 118.6 155 51.6
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 5.8e-25 118.2 133 54.1
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.7e-24 116.7 133 52.6
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 4.9e-24 115.2 136 50.0
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.4e-23 113.6 152 48.7
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 4.1e-23 112.1 121 53.7
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 3.5e-22 109.0 128 52.3
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 7.8e-22 107.8 124 53.2
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 1.3e-21 107.1 153 49.7
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 1.7e-21 106.7 181 42.5
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 6.6e-21 104.8 158 47.5
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 6.6e-21 104.8 155 50.3
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 8.6e-21 104.4 99 60.6
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.1e-20 104.0 160 46.9
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 4.3e-20 102.1 100 58.0
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 5.6e-20 101.7 101 57.4
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 3.6e-19 99.0 167 43.1
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 8.1e-19 97.8 155 43.9
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.4e-18 97.1 131 47.3
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.4e-18 97.1 153 45.1
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 4.0e-18 95.5 106 50.9
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 6.8e-18 94.7 155 45.2
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 2.0e-17 93.2 97 56.7
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 1.3e-16 90.5 106 49.1
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.1e-15 87.4 110 47.3
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 4.2e-15 85.5 143 42.7
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 5.4e-15 85.1 159 41.5
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 5.4e-15 85.1 112 48.2
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.7e-14 82.8 104 47.1
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 2.7e-14 82.8 163 39.3
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 5.1e-13 78.6 77 58.4
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 6.6e-13 78.2 79 50.6
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 8.7e-13 77.8 74 60.8
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 9.6e-12 74.3 156 37.2
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 9.6e-12 74.3 156 37.2
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 9.6e-12 74.3 118 46.6
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 1.6e-11 73.6 112 43.8
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.1e-10 70.9 85 50.6
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 1.8e-10 70.1 99 45.5
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 3.1e-10 69.3 115 40.9
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 4.0e-10 68.9 147 40.8
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 5.2e-10 68.6 96 45.8
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 1.5e-09 67.0 111 45.0
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 4.4e-09 65.5 112 44.6
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 9.9e-09 64.3 93 47.3
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 2.2e-08 63.2 135 39.3
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 6.4e-08 61.6 64 51.6
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 8.4e-08 61.2 129 40.3
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 1.1e-07 60.8 119 43.7
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 1.4e-07 60.5 111 39.6
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 1.9e-07 60.1 121 38.8
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 7.8e-06 54.7 92 40.2
CARHR144210 Cardamine hirsuta HOM05D005827 ORTHO05D005864 7.8e-06 54.7 52 59.6


User provided reference genes

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