Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 0.0e+00 1375.9 706 100.0
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 0.0e+00 1345.9 706 98.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 9.1e-269 930.2 721 68.1
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 1.0e-264 916.8 722 67.6
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 3.0e-264 915.2 732 67.1
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 7.5e-255 884.0 721 65.3
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.1e-253 880.2 724 65.2
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.0e-251 873.6 726 65.0
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 7.2e-250 867.5 720 64.6
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.3e-248 862.4 735 64.2
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 1.2e-247 860.1 733 64.3
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.7e-246 856.3 725 64.4
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 2.7e-244 849.0 731 63.5
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.0e-243 847.0 724 64.0
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.7e-243 846.3 728 63.6
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 8.0e-241 837.4 731 63.2
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 3.1e-240 835.5 724 63.5
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 8.9e-240 833.9 723 63.2
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 7.5e-239 830.9 724 64.4
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.7e-238 829.7 720 64.3
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 2.2e-238 829.3 715 63.1
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 3.7e-238 828.6 736 62.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 4.9e-238 828.2 724 64.2
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.1e-237 827.0 719 63.1
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.1e-237 827.0 722 62.2
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.9e-237 826.2 720 64.2
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 4.1e-237 825.1 726 63.9
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 9.2e-237 823.9 726 63.8
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.2e-236 823.5 717 63.6
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.0e-236 822.8 729 63.1
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 4.6e-236 821.6 722 63.3
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 6.0e-236 821.2 730 61.6
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.3e-235 819.3 726 62.1
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 3.0e-235 818.9 723 62.7
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 3.0e-235 818.9 718 62.4
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.6e-235 817.8 722 61.5
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.1e-234 817.0 715 62.7
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.5e-234 815.8 716 63.0
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.5e-234 815.8 719 61.8
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 5.6e-234 814.7 727 61.6
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 9.5e-234 813.9 717 62.3
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 2.1e-233 812.8 719 60.9
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.9e-230 802.4 721 62.0
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 2.4e-229 799.3 720 61.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 5.4e-229 798.1 717 60.9
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.4e-229 798.1 715 62.2
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.7e-228 795.8 725 59.6
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.6e-228 795.0 721 61.3
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 7.8e-228 794.3 724 61.6
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 3.9e-227 792.0 731 60.6
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.6e-227 790.8 710 62.0
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.5e-226 790.0 715 62.1
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.5e-226 790.0 710 61.8
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.2e-225 784.6 710 61.5
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.5e-223 780.0 713 60.9
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 2.0e-223 779.6 740 58.4
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 3.7e-222 775.4 715 60.1
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 6.4e-222 774.6 745 58.4
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 3.2e-221 772.3 639 63.4
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 5.4e-221 771.5 722 61.1
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.7e-220 769.2 942 49.3
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.5e-218 763.5 744 58.2
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.9e-218 763.1 723 60.2
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 4.3e-218 761.9 733 58.4
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.2e-217 760.4 733 58.0
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 4.7e-217 758.4 729 58.4
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.4e-216 756.9 724 58.4
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.2e-215 753.8 726 60.3
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 3.4e-215 752.3 737 57.9
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.4e-215 752.3 728 58.1
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 7.6e-215 751.1 723 57.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.9e-214 749.2 805 54.0
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.2e-213 745.3 725 57.2
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 2.1e-212 743.0 730 57.7
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 3.0e-211 739.2 712 57.0
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.1e-210 737.3 713 58.5
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 9.6e-210 734.2 709 57.5
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 6.2e-209 731.5 732 57.0
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.1e-208 729.2 732 57.0
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 4.4e-207 725.3 930 48.2
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 8.4e-206 721.1 729 55.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 2.4e-205 719.5 733 55.4
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 7.8e-204 714.5 778 53.0
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 5.3e-200 701.8 737 53.9
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 9.9e-199 697.6 598 64.7
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.1e-197 694.1 739 54.8
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 4.2e-197 692.2 732 54.2
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 9.3e-197 691.0 728 54.8
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 9.3e-197 691.0 730 53.6
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.7e-196 689.5 727 54.7
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 6.0e-196 688.3 726 54.7
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 3.0e-195 686.0 727 54.7
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 8.7e-195 684.5 729 54.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 6.9e-192 674.9 751 53.1
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.6e-188 663.7 744 53.0
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.8e-185 652.9 578 61.9
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.3e-182 644.0 628 57.2
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.3e-178 629.4 627 57.1
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.4e-173 614.0 576 60.1
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.8e-171 607.1 558 61.1
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.1e-164 583.6 712 50.3
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.2e-156 557.8 612 53.3
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.1e-152 544.7 602 51.8
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 5.3e-152 542.3 540 57.8
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 3.2e-141 506.5 525 55.2
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 5.6e-133 479.2 768 41.0
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 2.0e-127 460.7 788 39.2
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.7e-111 407.1 709 37.0
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.8e-99 367.9 263 72.2
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 5.2e-99 366.3 291 66.7
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 1.2e-87 328.6 473 47.1
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 6.0e-87 326.2 181 93.9
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.3e-86 325.1 445 45.4
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 1.9e-69 268.1 431 43.2
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 7.2e-64 249.6 311 51.4
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.5e-56 224.6 190 60.5
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 3.9e-54 217.2 156 73.7
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 9.1e-51 206.1 365 40.3
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.1e-47 194.9 286 44.1
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 6.7e-46 189.9 153 63.4
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.0e-38 166.0 133 63.2
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 8.8e-38 162.9 126 64.3
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.2e-33 148.3 126 60.3
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.9e-32 145.2 107 74.8
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-27 129.4 96 70.8
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.4e-22 112.5 148 46.6
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 7.5e-21 106.7 111 50.5
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.3e-20 105.9 144 47.9
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 1.2e-07 62.8 179 28.5
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 8.9e-06 56.6 71 46.5


User provided reference genes

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