Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 0.0e+00 1099.7 554 100.0
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 0.0e+00 1082.4 554 98.4
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.8e-240 835.9 569 76.1
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 8.0e-236 820.5 556 75.0
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 4.1e-232 808.1 553 73.4
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 1.2e-228 796.6 556 72.3
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 8.8e-227 790.4 540 73.1
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 5.7e-226 787.7 538 73.2
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.7e-225 786.2 540 72.8
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 6.3e-225 784.3 545 72.1
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 1.8e-224 782.7 540 72.8
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 2.0e-223 779.2 546 70.9
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 2.0e-223 779.2 553 72.2
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 3.5e-223 778.5 543 71.8
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 1.7e-222 776.2 533 73.5
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 2.3e-222 775.8 561 69.9
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.5e-221 773.1 545 71.9
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 6.1e-220 767.7 528 72.0
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 8.0e-220 767.3 483 76.8
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 1.4e-219 766.5 489 77.3
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 2.3e-219 765.8 561 69.5
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.2e-218 763.5 553 70.7
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 2.0e-218 762.7 496 75.4
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.6e-218 762.3 549 69.6
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 3.4e-218 761.9 498 75.7
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 4.4e-218 761.5 496 75.6
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 7.5e-218 760.8 546 71.2
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 1.3e-217 760.0 480 76.5
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 1.7e-217 759.6 543 70.2
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 2.8e-217 758.8 520 73.5
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 4.9e-217 758.1 522 72.4
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 6.3e-217 757.7 509 73.1
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 8.3e-217 757.3 503 75.0
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 1.1e-216 756.9 517 72.9
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 4.1e-216 755.0 564 69.1
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 7.0e-216 754.2 513 71.9
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 9.2e-216 753.8 489 74.8
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 1.2e-215 753.4 517 73.1
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 1.6e-215 753.1 511 72.6
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 4.5e-215 751.5 482 75.3
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 5.9e-215 751.1 494 74.1
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 5.9e-215 751.1 497 74.0
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 5.9e-215 751.1 544 70.8
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.7e-214 749.6 563 68.9
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 1.7e-214 749.6 514 71.0
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 1.9e-213 746.1 486 75.5
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 1.9e-213 746.1 527 70.2
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 3.3e-213 745.3 525 69.7
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 1.2e-212 743.4 510 71.6
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 2.1e-212 742.7 494 74.3
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 2.8e-212 742.3 456 78.9
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 8.0e-212 740.7 551 69.3
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 8.0e-212 740.7 516 70.5
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 8.0e-212 740.7 557 68.9
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.0e-211 740.3 553 68.5
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.4e-211 740.0 484 74.8
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 1.4e-211 740.0 516 71.3
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 1.8e-211 739.6 457 79.2
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 1.8e-211 739.6 521 72.2
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 2.3e-211 739.2 500 73.2
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 3.0e-211 738.8 552 69.2
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 5.2e-211 738.0 489 75.5
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 5.2e-211 738.0 535 70.7
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 5.2e-211 738.0 550 69.6
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 5.2e-211 738.0 521 72.0
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 1.5e-210 736.5 464 76.7
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 4.4e-210 734.9 555 66.1
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.3e-209 733.4 519 72.3
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 3.7e-209 731.9 487 73.5
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 8.3e-209 730.7 444 79.1
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 8.3e-209 730.7 537 69.5
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.1e-208 730.3 470 76.6
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 2.4e-208 729.2 490 73.5
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 3.2e-208 728.8 481 74.0
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 4.1e-208 728.4 481 74.0
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 5.4e-208 728.0 490 73.1
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 5.4e-208 728.0 489 73.8
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 9.2e-208 727.2 481 73.8
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.6e-207 726.5 548 68.2
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 6.0e-207 724.5 511 72.4
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.0e-206 723.8 481 73.4
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.0e-206 723.8 499 72.7
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 6.6e-206 721.1 489 72.8
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 2.1e-204 716.1 483 72.7
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 3.6e-204 715.3 461 75.3
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 3.1e-203 712.2 632 59.5
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 2.6e-202 709.1 448 76.8
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 5.8e-202 708.0 504 71.2
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 9.8e-202 707.2 559 66.7
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 2.2e-201 706.1 448 75.0
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 2.9e-201 705.7 564 66.0
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.9e-201 704.9 566 65.4
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.4e-200 703.4 500 68.8
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.4e-200 703.4 541 66.5
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 3.0e-198 695.7 421 78.9
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 1.6e-196 689.9 438 73.5
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 2.8e-180 636.0 538 63.8
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.6e-180 635.6 505 61.4
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 2.2e-177 626.3 373 80.4
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 4.9e-169 598.6 412 71.4
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.0e-158 564.3 381 74.3
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.5e-154 550.4 455 59.1
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 2.6e-154 549.7 424 67.5
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 1.2e-151 540.8 421 66.3
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 3.5e-151 539.3 444 58.1
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 3.4e-146 522.7 434 58.1
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.3e-132 477.6 436 54.6
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 2.0e-114 417.2 436 49.8
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 1.6e-106 391.0 480 45.6
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.9e-105 386.7 513 46.2
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.9e-104 384.0 505 45.0
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.5e-104 383.6 446 48.7
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.8e-103 380.2 449 47.9
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 3.4e-101 373.2 253 75.9
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 9.8e-101 371.7 477 43.2
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.2e-100 370.5 539 44.9
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 3.1e-94 350.1 514 43.2
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.0e-94 349.7 534 43.3
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 3.2e-83 313.5 481 39.3
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 4.4e-77 293.1 177 79.1
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 3.3e-72 276.9 169 76.9
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 7.9e-50 202.6 211 56.4
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 2.1e-42 177.9 157 58.6
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.0e-37 161.4 131 62.6
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 5.0e-36 156.8 138 60.1
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 3.7e-31 140.6 82 82.9
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 4.2e-27 127.1 105 59.0
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 7.9e-26 122.9 141 45.4
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 7.7e-21 106.3 104 57.7
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.0e-17 94.4 58 77.6
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.5e-13 82.0 119 46.2
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 6.5e-12 76.6 130 43.1
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 2.5e-11 74.7 141 43.3
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 4.2e-11 73.9 119 42.0
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 2.2e-07 61.6 133 37.6
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 3.7e-07 60.8 37 78.4


User provided reference genes

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