Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 2.4e-218 761.9 392 100.0
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 7.0e-186 654.1 386 89.4
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 4.9e-139 498.4 416 68.5
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 8.4e-139 497.7 416 68.5
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 3.3e-111 406.0 386 63.7
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 2.4e-69 266.9 425 42.8
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.5e-66 257.7 424 40.8
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.4e-53 214.5 415 38.1
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.6e-52 211.1 421 38.5
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 2.5e-50 203.8 417 36.7
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.1e-48 198.4 416 37.5
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 2.0e-47 194.1 417 36.2
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.7e-46 191.0 416 36.5
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 2.9e-46 190.3 417 35.0
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 3.7e-46 189.9 417 34.5
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 4.9e-46 189.5 423 34.3
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 4.1e-45 186.4 338 38.8
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 6.0e-44 182.6 420 31.9
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.3e-43 180.6 423 33.8
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.6e-41 174.5 391 34.8
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 3.6e-41 173.3 422 31.3
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 3.6e-41 173.3 418 32.8
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 6.2e-41 172.6 417 32.9
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 8.9e-40 168.7 400 34.8
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.5e-39 167.9 387 34.4
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.5e-39 167.9 427 31.6
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 5.8e-39 166.0 407 34.2
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 7.5e-39 165.6 385 36.6
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 9.9e-39 165.2 407 33.4
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 9.9e-39 165.2 334 35.6
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 6.4e-38 162.5 347 34.3
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.4e-37 161.4 377 34.0
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.4e-37 160.6 349 34.7
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 9.2e-37 158.7 390 34.4
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.1e-36 157.5 349 34.4
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 6.0e-36 156.0 421 32.8
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 7.8e-36 155.6 419 32.5
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.7e-35 154.5 349 33.5
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 2.3e-35 154.1 417 31.4
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 5.1e-35 152.9 413 31.5
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 8.6e-35 152.1 421 32.3
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 2.5e-34 150.6 387 33.6
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 7.3e-34 149.1 375 32.0
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 1.2e-33 148.3 335 33.7
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 6.2e-33 146.0 390 31.3
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 1.4e-32 144.8 428 30.1
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 5.2e-32 142.9 392 32.7
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 8.9e-32 142.1 415 30.6
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 1.2e-31 141.7 394 33.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.5e-31 141.4 424 30.7
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.0e-31 141.0 413 30.8
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 2.6e-31 140.6 391 30.2
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 2.6e-31 140.6 424 32.1
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 2.9e-30 137.1 251 38.6
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 3.8e-30 136.7 439 31.0
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 3.8e-30 136.7 426 29.3
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 8.4e-30 135.6 424 32.1
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 8.4e-30 135.6 403 29.5
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.4e-29 134.8 425 30.6
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.4e-29 134.0 342 33.0
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 3.2e-29 133.7 382 31.9
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 4.1e-29 133.3 425 30.6
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 7.1e-29 132.5 422 29.4
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.1e-28 131.0 414 30.7
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 4.6e-28 129.8 338 31.4
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.1e-26 125.2 400 30.8
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.9e-26 124.4 408 27.9
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 3.3e-26 123.6 362 28.2
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 5.6e-26 122.9 432 28.5
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 5.6e-26 122.9 425 29.2
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 7.3e-26 122.5 417 28.1
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 9.6e-26 122.1 354 31.4
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 2.8e-25 120.6 419 29.6
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 3.6e-25 120.2 404 29.5
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 3.6e-25 120.2 417 29.3
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 4.7e-25 119.8 420 28.3
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 2.0e-23 114.4 304 32.2
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 2.0e-23 114.4 393 30.0
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 9.9e-23 112.1 304 31.9
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 1.3e-22 111.7 304 31.9
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 1.4e-21 108.2 404 27.5
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 7.1e-21 105.9 253 34.0
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 3.5e-20 103.6 400 27.8
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 6.0e-20 102.8 393 28.2
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 7.8e-20 102.4 224 35.7
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 3.0e-19 100.5 367 28.1
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 5.1e-19 99.8 295 29.2
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.1e-18 98.6 296 29.4
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 1.1e-18 98.6 389 27.8
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 2.5e-18 97.4 396 29.8
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 3.3e-18 97.1 396 27.3
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 5.6e-18 96.3 296 30.7
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.8e-17 94.0 388 25.8
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 6.2e-17 92.8 182 36.8
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 6.9e-16 89.4 391 28.9
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.5e-15 88.2 393 28.5
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 1.5e-15 88.2 393 28.5
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 3.4e-15 87.0 394 26.9
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 4.2e-13 80.1 394 27.9
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 9.3e-13 79.0 129 38.0
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 1.3e-11 75.1 391 26.6
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.3e-11 74.3 305 26.6
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 4.0e-08 63.5 392 21.9
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 7.6e-07 59.3 203 28.1


User provided reference genes

Program Settings