Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 1.6e-59 232.6 122 100.0
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 6.1e-56 220.7 121 95.9
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 4.3e-41 171.4 122 74.6
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 9.5e-41 170.2 122 76.2
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 2.1e-40 169.1 122 76.2
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 6.2e-40 167.5 121 74.4
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 1.5e-38 162.9 122 72.1
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 2.6e-38 162.2 123 71.5
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 7.6e-38 160.6 123 70.7
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 9.9e-38 160.2 123 71.5
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.3e-37 159.8 122 73.8
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 1.7e-37 159.5 122 73.0
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 2.2e-37 159.1 122 72.1
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 3.7e-37 158.3 123 70.7
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 4.9e-37 157.9 122 70.5
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 6.4e-37 157.5 125 72.8
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 6.4e-37 157.5 123 70.7
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 6.4e-37 157.5 123 69.9
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.4e-36 156.4 122 71.3
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.9e-36 156.0 123 69.1
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 1.9e-36 156.0 122 68.9
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 1.9e-36 156.0 122 69.7
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 2.4e-36 155.6 122 69.7
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 3.2e-36 155.2 122 73.0
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 3.2e-36 155.2 122 68.9
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 4.1e-36 154.8 123 70.7
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 4.1e-36 154.8 122 68.9
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 4.1e-36 154.8 123 70.7
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 9.2e-36 153.7 122 69.7
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 2.1e-35 152.5 122 68.0
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 2.1e-35 152.5 122 68.0
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 2.1e-35 152.5 123 66.7
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 2.7e-35 152.1 122 69.7
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 2.7e-35 152.1 124 67.7
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 3.5e-35 151.8 121 69.4
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 4.6e-35 151.4 122 67.2
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 7.8e-35 150.6 123 69.1
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 1.3e-34 149.8 122 65.6
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.7e-34 149.4 122 66.4
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.0e-34 148.7 123 64.2
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 3.0e-34 148.7 122 66.4
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 3.9e-34 148.3 123 64.2
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 5.1e-34 147.9 122 68.9
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 1.1e-33 146.7 122 66.4
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 1.1e-33 146.7 122 66.4
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 1.1e-33 146.7 122 65.6
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 1.5e-33 146.4 122 65.6
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 1.5e-33 146.4 122 65.6
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 1.9e-33 146.0 122 65.6
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 2.5e-33 145.6 123 69.1
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 4.3e-33 144.8 121 65.3
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 4.3e-33 144.8 123 68.3
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 7.3e-33 144.1 124 67.7
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 9.6e-33 143.7 121 66.1
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 9.6e-33 143.7 123 67.5
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 9.6e-33 143.7 123 66.7
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 9.6e-33 143.7 122 68.0
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.2e-32 143.3 149 59.7
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 1.6e-32 142.9 121 65.3
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 6.2e-32 141.0 150 58.7
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 6.2e-32 141.0 121 63.6
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 8.1e-32 140.6 124 63.7
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 1.8e-31 139.4 124 63.7
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 3.1e-31 138.7 124 62.9
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 3.1e-31 138.7 163 54.0
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 8.9e-31 137.1 123 61.0
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 1.2e-30 136.7 124 62.9
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.5e-30 136.3 124 62.9
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 7.6e-30 134.0 123 61.0
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 9.9e-30 133.7 148 55.4
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 9.9e-30 133.7 127 62.2
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 2.9e-29 132.1 115 65.2
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 3.8e-29 131.7 124 58.1
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 4.9e-29 131.3 123 58.5
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 6.4e-29 131.0 124 58.1
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 1.1e-28 130.2 124 58.1
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 1.9e-28 129.4 125 58.4
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 3.2e-28 128.6 124 57.3
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 1.2e-27 126.7 127 60.6
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.6e-27 126.3 114 61.4
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.7e-27 125.6 127 60.6
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 3.5e-27 125.2 125 58.4
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 4.6e-27 124.8 135 56.3
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.0e-26 123.6 124 58.9
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 1.7e-26 122.9 134 57.5
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 2.3e-26 122.5 123 55.3
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 5.1e-26 121.3 128 54.7
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 6.6e-26 120.9 127 55.1
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 1.5e-25 119.8 128 55.5
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 1.9e-25 119.4 128 54.7
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 1.9e-25 119.4 128 54.7
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 1.9e-25 119.4 128 54.7
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 2.5e-25 119.0 103 59.2
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.3e-25 118.6 100 64.0
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 3.3e-25 118.6 82 69.5
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.3e-24 116.7 92 64.1
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 1.6e-24 116.3 127 56.7
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 1.6e-24 116.3 127 56.7
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 1.6e-24 116.3 127 56.7
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.4e-23 113.2 123 52.8
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 2.4e-23 112.5 109 58.7
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 2.4e-23 112.5 109 58.7
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.4e-23 112.5 79 75.9
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 4.0e-23 111.7 122 52.5
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 4.4e-22 108.2 79 67.1
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 5.8e-22 107.8 122 54.1
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 3.8e-21 105.1 81 70.4
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 3.8e-21 105.1 81 70.4
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 1.9e-20 102.8 105 52.4
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 2.4e-20 102.4 127 50.4
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 4.2e-20 101.7 152 45.4
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 9.3e-20 100.5 83 63.9
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 3.5e-19 98.6 167 45.5
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 1.7e-18 96.3 124 45.2
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.3e-18 95.9 78 62.8
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 6.2e-16 87.8 54 75.9
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 1.4e-15 86.7 52 76.9
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 5.3e-15 84.7 121 43.8
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 2.0e-14 82.8 96 46.9
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 2.6e-14 82.4 52 76.9
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 3.4e-14 82.0 51 72.5
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 4.5e-14 81.6 52 67.3
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 9.9e-14 80.5 53 71.7
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.7e-13 79.7 125 36.0
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 3.8e-13 78.6 126 36.5
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 7.1e-12 74.3 101 38.6
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 7.4e-09 64.3 40 72.5
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 9.6e-09 63.9 83 49.4


User provided reference genes

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