Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 1.6e-88 329.3 161 100.0
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 3.3e-65 251.9 126 98.4
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 3.4e-38 162.2 113 65.5
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 1.1e-36 157.1 112 67.0
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 3.2e-36 155.6 148 51.4
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 1.8e-34 149.8 113 60.2
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 6.7e-34 147.9 114 58.8
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 8.7e-34 147.5 124 58.1
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 1.1e-33 147.1 121 56.2
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 1.9e-33 146.4 110 60.9
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 2.5e-33 146.0 110 60.9
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 4.3e-33 145.2 119 57.1
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 1.3e-32 143.7 108 61.1
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 1.3e-32 143.7 126 57.1
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 1.6e-32 143.3 113 59.3
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 3.7e-32 142.1 112 58.9
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 4.8e-32 141.7 116 58.6
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 4.8e-32 141.7 116 58.6
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 6.3e-32 141.4 120 55.0
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 1.1e-31 140.6 118 54.2
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.1e-31 140.6 114 58.8
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 1.4e-31 140.2 114 58.8
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 1.8e-31 139.8 135 51.9
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 2.4e-31 139.4 109 60.6
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 2.4e-31 139.4 110 58.2
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 3.1e-31 139.0 116 59.5
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 3.1e-31 139.0 108 60.2
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 4.1e-31 138.7 127 53.5
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 6.9e-31 137.9 123 54.5
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 9.0e-31 137.5 114 56.1
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 9.0e-31 137.5 119 54.6
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 1.2e-30 137.1 123 54.5
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 1.2e-30 137.1 129 55.8
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 1.2e-30 137.1 129 55.8
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 2.0e-30 136.3 114 55.3
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 2.0e-30 136.3 114 55.3
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 2.0e-30 136.3 120 55.8
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 7.6e-30 134.4 111 58.6
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 7.6e-30 134.4 113 53.1
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 1.0e-29 134.0 117 53.0
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 1.0e-29 134.0 113 55.8
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 1.7e-29 133.3 102 60.8
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 1.7e-29 133.3 113 54.9
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 1.7e-29 133.3 98 60.2
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 2.2e-29 132.9 111 53.2
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 2.2e-29 132.9 101 59.4
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 2.9e-29 132.5 111 54.1
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 5.0e-29 131.7 117 53.8
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 5.0e-29 131.7 109 56.9
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 6.5e-29 131.3 118 55.9
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 6.5e-29 131.3 124 49.2
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 1.1e-28 130.6 112 54.5
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 1.4e-28 130.2 111 54.1
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 1.4e-28 130.2 118 51.7
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 4.2e-28 128.6 123 51.2
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 4.2e-28 128.6 112 56.2
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 5.5e-28 128.3 101 58.4
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 1.2e-27 127.1 117 57.3
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 1.2e-27 127.1 117 51.3
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 1.2e-27 127.1 129 48.8
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 1.2e-27 127.1 131 48.1
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 1.6e-27 126.7 114 48.2
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 1.6e-27 126.7 102 56.9
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 2.7e-27 125.9 117 53.0
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 2.7e-27 125.9 117 53.0
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 3.6e-27 125.6 114 57.0
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 4.6e-27 125.2 114 50.9
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 4.6e-27 125.2 93 61.3
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 4.6e-27 125.2 101 60.4
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.6e-27 125.2 101 60.4
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.6e-27 125.2 118 52.5
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 4.6e-27 125.2 92 59.8
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 7.9e-27 124.4 101 59.4
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 7.9e-27 124.4 112 50.0
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 3.0e-26 122.5 116 54.3
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 3.0e-26 122.5 127 49.6
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 3.9e-26 122.1 101 58.4
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 8.8e-26 120.9 93 57.0
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 8.8e-26 120.9 114 54.4
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 1.5e-25 120.2 101 54.5
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 4.3e-25 118.6 125 50.4
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 9.7e-25 117.5 126 47.6
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 1.3e-24 117.1 120 51.7
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 1.3e-24 117.1 133 43.6
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 1.7e-24 116.7 109 50.5
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 2.2e-24 116.3 141 44.7
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 2.8e-24 115.9 108 48.1
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 3.7e-24 115.5 122 47.5
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 3.7e-24 115.5 131 45.8
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 6.3e-24 114.8 126 44.4
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 1.4e-23 113.6 115 47.8
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 1.8e-23 113.2 117 46.2
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 1.8e-23 113.2 115 47.0
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 2.4e-23 112.8 111 48.6
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 2.4e-23 112.8 114 46.5
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 4.1e-23 112.1 104 50.0
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 4.1e-23 112.1 119 51.3
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 4.1e-23 112.1 117 50.4
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 6.9e-23 111.3 116 53.4
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 9.1e-23 110.9 102 49.0
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 9.1e-23 110.9 118 45.8
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 1.2e-22 110.5 118 46.6
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 1.2e-22 110.5 118 46.6
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 1.2e-22 110.5 100 52.0
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 1.5e-22 110.2 117 47.9
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 1.5e-22 110.2 117 47.9
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 1.5e-22 110.2 117 47.9
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 1.5e-22 110.2 114 46.5
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.0e-22 109.8 108 48.1
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 4.5e-22 108.6 134 45.5
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 2.2e-21 106.3 165 39.4
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 6.5e-21 104.8 102 50.0
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 6.5e-21 104.8 118 50.8
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 5.5e-20 101.7 112 44.6
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 1.0e-18 97.4 78 59.0
THA.LOC104826761 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 1.8e-18 96.7 114 39.5
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 1.8e-18 96.7 103 46.6
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 2.3e-18 96.3 82 54.9
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 5.1e-18 95.1 108 44.4
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 2.0e-17 93.2 117 47.0
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.0e-17 93.2 117 47.0
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.0e-17 93.2 117 47.0
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 2.0e-17 93.2 121 39.7
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 2.6e-17 92.8 106 43.4
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 5.7e-17 91.7 99 43.4
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 7.4e-17 91.3 117 46.2
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 9.7e-17 90.9 138 41.3
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 1.3e-16 90.5 90 50.0
Pp3c26_11470 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.7e-16 90.1 96 41.7
SMO004G0024 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 1.7e-16 90.1 144 38.9
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 2.2e-16 89.7 129 40.3
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 2.8e-16 89.4 72 56.9
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis HOM05D001544 ORTHO05D005712 1.8e-15 86.7 126 38.1
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 3.1e-15 85.9 90 46.7
FAN23G2664 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.0e-14 83.2 159 38.4
Pp3c14_16330 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.7e-13 80.1 118 39.8
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 2.9e-13 79.3 113 41.6
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 5.0e-13 78.6 108 37.0
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 2.5e-12 76.3 94 43.6
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 2.5e-12 76.3 205 29.8
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 3.2e-12 75.9 110 36.4
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 5.5e-12 75.1 130 33.8
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 1.6e-11 73.6 86 39.5
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 3.0e-10 69.3 69 44.9
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 3.9e-10 68.9 73 46.6


User provided reference genes

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