Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 8.0e-77 290.4 154 100.0
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.3e-63 245.7 155 87.7
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.1e-38 163.7 157 65.6
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.3e-38 161.8 157 63.7
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.2e-37 160.2 155 65.8
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.8e-37 159.1 155 66.5
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.2e-35 153.7 153 63.4
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 2.0e-35 152.9 153 64.1
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.6e-35 152.5 158 62.0
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.4e-35 152.1 152 61.8
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 5.8e-35 151.4 157 62.4
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 7.6e-35 151.0 112 74.1
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 9.9e-35 150.6 156 60.3
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 9.9e-35 150.6 153 60.8
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 3.7e-34 148.7 155 61.9
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 6.4e-34 147.9 154 62.3
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 8.4e-34 147.5 151 62.3
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 2.4e-33 146.0 155 61.3
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 4.1e-33 145.2 157 59.9
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 4.1e-33 145.2 155 60.6
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.4e-33 144.8 148 62.2
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.2e-32 143.7 154 59.7
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.2e-32 143.7 147 63.3
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 1.2e-32 143.7 155 59.4
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 2.1e-32 142.9 154 59.7
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.1e-32 142.9 124 66.9
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.1e-32 142.9 140 63.6
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.7e-32 142.5 153 60.1
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 4.6e-32 141.7 124 66.9
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 7.8e-32 141.0 150 61.3
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.0e-31 140.6 142 64.1
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.3e-31 140.2 154 58.4
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.7e-31 139.8 149 57.7
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.0e-31 139.0 156 60.3
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 3.9e-31 138.7 146 59.6
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.9e-31 138.7 155 60.0
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 5.1e-31 138.3 115 69.6
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 6.6e-31 137.9 153 60.1
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 8.6e-31 137.5 112 68.8
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.9e-30 136.3 152 57.9
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.5e-30 136.0 158 57.6
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 3.3e-30 135.6 150 58.0
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 3.3e-30 135.6 157 58.0
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 4.3e-30 135.2 160 57.5
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 5.6e-30 134.8 157 58.0
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 9.6e-30 134.0 117 67.5
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 9.6e-30 134.0 133 60.9
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.6e-29 133.3 160 56.9
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.6e-29 133.3 153 58.8
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 2.8e-29 132.5 145 57.2
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 2.8e-29 132.5 154 57.1
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 2.8e-29 132.5 154 57.1
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.6e-29 132.1 158 55.7
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 4.7e-29 131.7 145 57.2
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 4.7e-29 131.7 145 57.2
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.7e-29 131.7 114 65.8
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.7e-29 131.7 114 65.8
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.7e-29 131.7 114 65.8
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 6.2e-29 131.3 153 56.9
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 8.1e-29 131.0 154 57.8
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 8.1e-29 131.0 144 61.1
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 8.1e-29 131.0 144 61.1
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 8.1e-29 131.0 155 56.1
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.4e-28 130.2 153 56.2
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.4e-28 130.2 144 56.9
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.4e-28 130.2 155 55.5
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.8e-28 129.8 154 57.1
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.8e-28 129.8 136 59.6
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.8e-28 129.8 154 56.5
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 2.4e-28 129.4 151 57.0
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 3.1e-28 129.0 159 54.7
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.0e-28 128.6 148 58.1
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 5.2e-28 128.3 151 54.3
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 6.8e-28 127.9 148 58.8
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 8.9e-28 127.5 154 55.2
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.2e-27 127.1 77 85.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.5e-27 126.7 108 65.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.5e-27 126.7 153 55.6
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 55.7
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 55.0
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.0e-27 126.3 149 55.0
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 3.4e-27 125.6 154 53.9
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 3.4e-27 125.6 154 55.8
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 4.4e-27 125.2 154 55.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.4e-27 125.2 155 56.1
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.4e-27 125.2 114 64.0
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 4.4e-27 125.2 115 60.9
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 7.6e-27 124.4 152 54.6
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 7.6e-27 124.4 155 53.5
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 9.9e-27 124.0 146 54.8
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.3e-26 123.6 82 78.0
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.7e-26 123.2 154 53.9
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.7e-26 123.2 150 56.0
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.9e-26 122.5 151 56.3
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.8e-26 122.1 160 51.9
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 4.9e-26 121.7 153 54.2
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 4.9e-26 121.7 153 54.2
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 4.9e-26 121.7 147 51.7
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.1e-25 120.6 150 52.7
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.2e-25 119.0 125 58.4
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 1.6e-24 116.7 134 53.7
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 3.5e-24 115.5 78 76.9
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.6e-24 115.2 70 84.3
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 7.8e-24 114.4 130 62.3
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.0e-23 114.0 200 42.0
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.0e-23 114.0 86 73.3
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.3e-23 113.6 70 82.9
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 9.6e-22 107.5 128 57.8
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 2.8e-21 105.9 133 52.6
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.4e-20 103.6 146 50.0
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 2.0e-19 99.8 73 72.6
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.2e-18 96.3 67 76.1
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 3.8e-18 95.5 67 68.7
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 1.1e-17 94.0 61 77.0
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.9e-17 93.2 154 47.4
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.9e-17 93.2 123 52.0
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.2e-17 92.4 123 50.4
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 3.5e-16 89.0 134 53.7
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.5e-11 72.0 61 63.9
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.6e-11 71.2 107 48.6
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.9e-10 69.3 95 50.5
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 2.1e-08 63.2 90 51.1
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.9e-07 58.9 72 47.2
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.9e-07 58.9 48 70.8
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 4.3e-06 55.5 61 47.5
Cre04.g217932 Chlamydomonas reinhardtii HOM05D006256 ORTHO05D144903 7.4e-06 54.7 103 35.9


User provided reference genes

Program Settings