Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 2.2e-114 415.6 210 100.0
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 8.8e-111 403.7 210 97.1
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 7.8e-67 257.7 201 68.7
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 2.3e-66 256.1 200 67.0
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 5.1e-66 255.0 205 64.4
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 2.5e-65 252.7 199 66.8
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 2.5e-65 252.7 203 66.0
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 5.6e-65 251.5 207 64.7
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 1.2e-64 250.4 202 66.3
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 2.8e-64 249.2 202 64.9
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 4.7e-64 248.4 201 63.7
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 4.7e-64 248.4 201 63.7
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 8.1e-64 247.7 201 63.2
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 8.1e-64 247.7 203 66.0
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.1e-63 247.3 200 67.5
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.4e-63 246.9 201 62.2
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 6.8e-63 244.6 200 67.0
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 8.9e-63 244.2 200 67.0
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 1.2e-62 243.8 199 64.8
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.5e-62 243.4 200 66.5
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.5e-62 243.4 203 62.6
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.0e-62 243.0 201 62.7
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 2.0e-62 243.0 201 64.7
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 3.4e-62 242.3 200 66.5
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 4.4e-62 241.9 204 64.7
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 4.4e-62 241.9 210 61.9
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 4.4e-62 241.9 204 63.7
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 5.8e-62 241.5 203 64.0
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 1.7e-61 240.0 207 62.8
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 3.8e-61 238.8 183 71.6
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 4.9e-61 238.4 199 62.8
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 4.9e-61 238.4 202 63.9
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 4.9e-61 238.4 201 62.2
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 6.4e-61 238.0 198 63.6
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.1e-60 237.3 200 62.5
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 1.4e-60 236.9 209 60.3
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 1.4e-60 236.9 209 60.3
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.4e-60 236.9 199 64.8
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.9e-60 236.5 211 61.6
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 2.4e-60 236.1 210 61.4
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 3.2e-60 235.7 200 64.0
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 3.2e-60 235.7 203 61.1
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 9.3e-60 234.2 204 62.3
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 9.3e-60 234.2 198 62.6
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 9.3e-60 234.2 198 62.6
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.2e-59 233.8 211 62.1
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.2e-59 233.8 200 63.5
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.2e-59 233.8 207 63.3
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.6e-59 233.4 198 60.6
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 2.1e-59 233.0 208 61.5
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 2.1e-59 233.0 201 63.7
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 3.5e-59 232.3 170 67.6
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 3.5e-59 232.3 182 63.7
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 4.6e-59 231.9 204 61.3
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 6.0e-59 231.5 200 63.0
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 7.8e-59 231.1 201 61.2
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.0e-58 230.7 197 60.9
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.7e-58 229.9 196 61.7
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.3e-58 229.6 173 65.9
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 3.9e-58 228.8 195 60.5
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 5.1e-58 228.4 194 60.8
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 5.1e-58 228.4 204 63.2
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 6.6e-58 228.0 205 61.5
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 6.6e-58 228.0 201 63.2
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 8.7e-58 227.6 208 59.1
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 1.5e-57 226.9 194 63.4
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 1.5e-57 226.9 199 61.8
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 3.3e-57 225.7 125 82.4
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 3.3e-57 225.7 169 66.9
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.6e-57 224.9 154 72.1
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 5.6e-57 224.9 210 59.0
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 2.8e-56 222.6 178 64.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 3.6e-56 222.2 201 58.2
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 8.1e-56 221.1 196 60.2
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.1e-55 220.7 202 59.4
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 2.4e-55 219.5 194 60.3
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 4.0e-55 218.8 164 68.3
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 5.3e-55 218.4 204 57.4
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 9.0e-55 217.6 155 70.3
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.2e-54 217.2 219 55.3
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.5e-54 216.9 176 66.5
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 2.0e-54 216.5 155 69.7
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 3.4e-54 215.7 168 66.7
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 4.4e-54 215.3 165 67.3
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 4.4e-54 215.3 164 67.7
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 5.8e-54 214.9 174 66.7
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 5.8e-54 214.9 167 67.1
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 9.9e-54 214.2 180 62.8
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 2.9e-53 212.6 200 58.0
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.9e-53 212.6 200 58.0
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 2.9e-53 212.6 200 58.0
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.4e-52 210.3 176 61.9
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 3.5e-51 205.7 144 67.4
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 7.8e-51 204.5 157 67.5
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 3.9e-50 202.2 149 67.1
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.1e-49 200.7 200 58.5
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.1e-41 174.1 175 57.1
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.6e-40 170.2 133 58.6
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 8.1e-40 167.9 128 60.9
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 1.1e-39 167.5 128 63.3
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 2.5e-36 156.4 85 84.7
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 7.9e-35 151.4 143 58.0
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 1.3e-34 150.6 145 51.0
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 3.9e-34 149.1 139 57.6
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 1.5e-33 147.1 141 51.8
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.4e-30 136.0 132 53.8
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 7.1e-28 128.3 187 44.4
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.1e-20 104.4 130 48.5
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 1.4e-20 104.0 68 70.6
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 2.7e-19 99.8 195 37.4
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 3.9e-10 69.3 105 45.7


User provided reference genes

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