Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3574 Papaver somniferum HOM05D008526 ORTHO05D010380 1.1e-101 373.2 187 100.0
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 2.5e-93 345.5 186 93.0
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 9.7e-85 317.0 186 87.1
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-74 283.5 186 75.3
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-66 256.9 189 67.2
PSO478G4591 Papaver somniferum HOM05D008526 ORTHO05D010380 1.3e-49 200.3 163 63.2
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 3.2e-48 195.7 175 60.0
PSO782G0255 Papaver somniferum HOM05D008526 ORTHO05D010380 2.2e-44 183.0 169 58.0
PSO801G0034 Papaver somniferum HOM05D008526 ORTHO05D010380 7.0e-43 177.9 154 61.0
PSO478G2167 Papaver somniferum HOM05D008526 ORTHO05D010380 7.5e-37 157.9 130 62.3
PSO339G1382 Papaver somniferum HOM05D008526 ORTHO05D010380 9.8e-37 157.5 130 61.5
PSO832G3122 Papaver somniferum HOM05D008526 ORTHO05D010380 1.1e-35 154.1 130 61.5
PSO724G1104 Papaver somniferum HOM05D008526 ORTHO05D010380 1.4e-35 153.7 130 60.8
PSO675G3708 Papaver somniferum HOM05D008526 ORTHO05D010380 8.6e-33 144.4 177 49.2
PSO832G3699 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-31 140.6 118 60.2
PSO210G3798 Papaver somniferum HOM05D008526 ORTHO05D010380 3.6e-31 139.0 114 62.3
PSO675G5349 Papaver somniferum HOM05D008526 ORTHO05D010380 5.2e-30 135.2 87 80.5
PSO541G2643 Papaver somniferum HOM05D008526 ORTHO05D010380 8.9e-30 134.4 126 56.3
PSO386G0208 Papaver somniferum HOM05D008526 ORTHO05D010380 2.9e-28 129.4 100 63.0
PSO801G0695 Papaver somniferum HOM05D008526 ORTHO05D010380 9.2e-27 124.4 97 62.9
PSO443G0086 Papaver somniferum HOM05D008526 ORTHO05D010380 1.5e-24 117.1 99 60.6
PSO765G0053 Papaver somniferum HOM05D008526 ORTHO05D010380 1.8e-22 110.2 85 62.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.2e-19 99.4 171 33.3
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 7.8e-18 94.7 177 37.3
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 6.6e-17 91.7 185 30.3
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 8.6e-17 91.3 164 29.9
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 1.5e-16 90.5 171 31.0
PSO013G0093 Papaver somniferum HOM05D008526 ORTHO05D010380 7.3e-16 88.2 78 55.1
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 4.7e-15 85.5 173 34.7
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 5.2e-14 82.0 170 32.4
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.6e-13 79.7 185 29.2
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 4.4e-13 79.0 153 30.1
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 7.6e-13 78.2 175 34.3
PSO478G3637 Papaver somniferum HOM05D008526 ORTHO05D010380 7.6e-13 78.2 57 61.4
PSO478G0504 Papaver somniferum HOM05D008526 ORTHO05D010380 1.7e-12 77.0 57 61.4
PSO541G1961 Papaver somniferum HOM05D008526 ORTHO05D010380 1.7e-12 77.0 57 61.4
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 4.9e-12 75.5 162 29.0
PSO210G7597 Papaver somniferum HOM05D008526 ORTHO05D010380 4.9e-12 75.5 57 59.6
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.9e-12 75.5 162 30.9
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 4.9e-12 75.5 177 29.4
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 1.1e-11 74.3 183 29.5
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 1.4e-11 73.9 173 31.2
CANSAT80G0158 Cannabis sativa HOM05D000539 ORTHO05D000233 1.9e-11 73.6 187 29.4
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 2.4e-11 73.2 166 28.9
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.1e-11 72.4 164 29.9
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 9.2e-11 71.2 174 28.7
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 9.2e-11 71.2 174 28.7
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 1.2e-10 70.9 174 28.7
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 1.2e-10 70.9 174 28.7
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 1.6e-10 70.5 158 30.4
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.1e-10 70.1 183 29.0
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.6e-10 68.9 160 31.2
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-10 68.6 175 26.3
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-10 68.6 175 26.3
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-10 68.6 175 26.3
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-09 67.4 159 27.7
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-09 67.4 175 25.7
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.3e-09 66.6 164 27.4
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 2.3e-09 66.6 165 29.7
Aqoxy2G01958 Aquilegia oxysepala HOM05D035295 ORTHO05D003170 3.0e-09 66.2 159 29.6
RcHm_v2.0_Chr5g0064791 Rosa chinensis HOM05D007314 ORTHO05D023934 3.0e-09 66.2 131 35.9
MELO3C027955.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.9e-09 65.9 166 27.7
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.9e-09 65.9 175 25.7
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.9e-09 65.9 175 25.7
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 3.9e-09 65.9 175 29.7
MELO3C027188.2 Cucumis melo HOM05D000583 ORTHO05D000233 5.1e-09 65.5 159 28.9
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 5.1e-09 65.5 162 28.4
CANSAT56G2121 Cannabis sativa HOM05D000539 ORTHO05D000233 6.6e-09 65.1 178 30.3
MBI01_g06508_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 6.6e-09 65.1 143 28.0
SHI50567 Sapria himalayana HOM05D000616 ORTHO05D000233 8.6e-09 64.7 184 29.9
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.1e-08 64.3 162 27.8
MELO3C034178.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.1e-08 64.3 162 27.8
MBI06_g45493_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.1e-08 64.3 183 24.0
SHI08770 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-08 64.3 173 30.1
PSO675G3181 Papaver somniferum HOM05D008526 ORTHO05D010380 1.5e-08 63.9 47 63.8
Aqoxy4G00209 Aquilegia oxysepala HOM05D035295 ORTHO05D003170 1.9e-08 63.5 172 29.1
CANSAT11G2450 Cannabis sativa HOM05D013932 ORTHO05D011884 1.9e-08 63.5 175 29.1
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.9e-08 63.5 173 27.7
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.9e-08 63.5 190 27.9
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 1.9e-08 63.5 162 28.4
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 3.3e-08 62.8 162 27.2
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 3.3e-08 62.8 173 28.9
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 3.3e-08 62.8 174 27.0
Ca_04436_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.3e-08 62.4 192 28.6
PSO478G4220 Papaver somniferum HOM05D008526 ORTHO05D010380 4.3e-08 62.4 47 61.7
MBI01_g41484_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 5.6e-08 62.0 175 26.3
MBI16_g35338_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 5.6e-08 62.0 180 25.6
CANSAT54G0698 Cannabis sativa HOM05D000539 ORTHO05D000233 7.3e-08 61.6 176 29.0
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 7.3e-08 61.6 167 28.1
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-08 61.2 94 28.7
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 9.6e-08 61.2 172 26.2
MBI14_g08057_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.2e-07 60.8 172 24.4
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-07 60.8 171 27.5
MBI15_g06453_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 1.6e-07 60.5 166 27.7
SHI14829 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-07 60.5 183 28.4
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 2.1e-07 60.1 178 25.8
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 2.1e-07 60.1 174 26.4
Prupe.4G254700 Prunus persica HOM05D000539 ORTHO05D000233 2.1e-07 60.1 171 26.3
SHI01020 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-07 60.1 182 29.1
Sed0028051 Sechium edule HOM05D007314 ORTHO05D010380 2.1e-07 60.1 109 32.1
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.1e-07 60.1 184 24.5
MBI12_g03766_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 3.6e-07 59.3 176 25.0
RcHm_v2.0_Chr2g0133581 Rosa chinensis HOM05D020182 ORTHO05D010380 3.6e-07 59.3 133 30.1
DCAR_032376 Daucus carota HOM05D013476 ORTHO05D012368 4.7e-07 58.9 177 22.0
MBI11_g23345_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 4.7e-07 58.9 166 25.9
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.7e-07 58.9 165 27.3
SHI32661 Sapria himalayana HOM05D000616 ORTHO05D000233 4.7e-07 58.9 187 28.9
CANSAT54G2622 Cannabis sativa HOM05D000539 ORTHO05D000233 8.1e-07 58.2 175 28.0
CANSAT01G0116 Cannabis sativa HOM05D000539 ORTHO05D000233 1.1e-06 57.8 179 26.3
FAN18G3492 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-06 57.8 77 33.8
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.1e-06 57.8 147 24.5
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 1.4e-06 57.4 180 25.6
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 1.4e-06 57.4 127 32.3
SHI38857 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-06 57.4 171 26.9
SHI42017 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-06 57.0 183 27.3
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 1.8e-06 57.0 166 27.1
AUR62042300 Chenopodium quinoa HOM05D007123 ORTHO05D000233 2.4e-06 56.6 164 24.4
Lalb_Chr05g0226381 Lupinus albus HOM05D002644 ORTHO05D003267 2.4e-06 56.6 186 31.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-06 56.6 184 26.6
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.1e-06 56.2 159 23.9
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.1e-06 56.2 182 26.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 3.1e-06 56.2 165 25.5
PSO675G3154 Papaver somniferum HOM05D010561 ORTHO05D011256 3.1e-06 56.2 166 25.3
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 4.0e-06 55.8 80 26.2
PSO732G0066 Papaver somniferum HOM05D010561 ORTHO05D011256 4.0e-06 55.8 169 24.9
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 5.2e-06 55.5 175 26.9
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 5.2e-06 55.5 167 31.1
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 5.2e-06 55.5 145 26.9
SHI38771 Sapria himalayana HOM05D000616 ORTHO05D000233 5.2e-06 55.5 181 26.5
Aqoxy3G02895 Aquilegia oxysepala HOM05D002644 ORTHO05D003267 6.8e-06 55.1 98 31.6
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 6.8e-06 55.1 165 27.3
AUR62042679 Chenopodium quinoa HOM05D007123 ORTHO05D000233 6.8e-06 55.1 79 29.1
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.8e-06 55.1 165 23.6
ECA247G2753 Erigeron canadensis HOM05D000006 ORTHO05D000062 6.8e-06 55.1 169 26.6
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.8e-06 55.1 59 39.0
SHI03572 Sapria himalayana HOM05D000616 ORTHO05D000233 6.8e-06 55.1 183 27.9
ECA248G3122 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.9e-06 54.7 60 33.3
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 8.9e-06 54.7 86 34.9


User provided reference genes

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