Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 2.0e-250 868.6 429 100.0
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-232 808.9 429 94.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-217 758.4 440 85.9
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-211 739.6 439 85.9
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-209 732.3 436 86.0
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.5e-205 718.8 435 83.7
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-196 689.9 441 80.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-195 686.8 437 79.4
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 6.9e-195 684.1 433 80.1
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 5.8e-194 681.0 432 78.5
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-188 661.8 433 77.8
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.5e-185 651.0 431 77.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 5.3e-179 631.3 442 75.3
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-173 613.2 451 72.5
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.0e-141 506.5 419 62.1
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 7.5e-141 504.6 429 62.5
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.8e-139 500.0 417 62.8
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.3e-137 493.8 415 61.0
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.0e-137 491.9 426 60.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.5e-136 490.3 430 60.5
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.2e-135 487.3 348 68.4
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 6.1e-135 485.0 417 61.2
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.8e-134 483.4 415 59.0
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 5.2e-134 481.9 418 58.9
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.2e-133 480.7 426 58.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 5.8e-133 478.4 427 58.1
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.1e-131 474.2 430 58.6
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.4e-131 473.8 428 58.2
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.2e-130 470.7 419 59.4
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 3.5e-130 469.2 427 57.8
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.0e-129 467.6 412 59.5
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.7e-129 466.8 416 59.6
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 5.0e-129 465.3 419 58.7
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.1e-128 464.2 420 57.4
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.5e-128 463.8 417 58.5
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.3e-128 461.5 415 59.0
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 7.3e-128 461.5 417 57.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.8e-127 459.5 415 58.6
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.8e-127 459.5 421 58.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 4.7e-127 458.8 417 57.1
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 1.1e-126 457.6 417 55.4
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.1e-126 457.6 415 55.4
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.4e-126 457.2 428 57.0
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.3e-126 456.4 416 58.2
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.1e-126 456.1 428 56.8
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.1e-126 456.1 417 56.8
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 5.2e-126 455.3 426 57.3
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 6.8e-126 454.9 418 57.7
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 6.8e-126 454.9 412 56.3
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 6.8e-126 454.9 418 57.9
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.2e-125 454.1 426 57.7
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.5e-125 453.8 416 57.9
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.0e-125 453.4 417 55.2
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 2.0e-125 453.4 416 57.9
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.0e-125 453.4 417 56.6
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.0e-125 453.4 426 56.1
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 2.6e-125 453.0 418 57.2
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.4e-125 452.2 415 56.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.8e-125 451.8 424 56.1
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 9.8e-125 451.1 417 56.4
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.3e-124 450.7 407 58.7
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.9e-124 449.5 417 56.1
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 2.9e-124 449.5 419 55.8
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 6.4e-124 448.4 415 54.9
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 6.4e-124 448.4 419 56.1
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.9e-123 446.8 428 54.2
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.2e-123 446.0 412 55.8
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.2e-123 446.0 412 55.8
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.2e-123 446.0 412 55.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 5.4e-123 445.3 422 54.5
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.1e-122 443.4 416 56.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.6e-122 442.2 412 56.1
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 6.0e-122 441.8 412 56.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 7.8e-122 441.4 423 55.6
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.8e-122 441.4 417 55.4
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.0e-121 441.0 415 57.1
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.0e-121 439.5 443 53.7
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.1e-121 438.7 381 57.7
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 6.6e-121 438.3 431 54.8
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 6.6e-121 438.3 422 54.0
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.5e-120 437.2 411 56.2
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.5e-120 437.2 339 63.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.5e-120 436.4 415 55.4
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 4.3e-120 435.6 345 61.7
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 9.5e-120 434.5 412 55.1
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 9.5e-120 434.5 349 61.9
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 9.5e-120 434.5 424 53.8
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.2e-119 434.1 415 55.9
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 2.1e-119 433.3 414 55.1
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.1e-119 433.3 390 58.2
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.1e-118 431.0 427 54.3
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.4e-118 430.6 417 54.9
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.4e-118 430.6 425 52.5
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.3e-118 429.9 414 55.1
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 2.3e-118 429.9 420 54.0
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 4.0e-118 429.1 414 54.8
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 6.8e-118 428.3 411 55.2
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 6.8e-118 428.3 417 54.2
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 8.9e-118 427.9 426 53.8
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.2e-117 427.6 421 54.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 1.5e-117 427.2 342 60.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.5e-117 427.2 419 53.2
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 2.0e-117 426.8 415 54.0
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 3.4e-117 426.0 417 53.5
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 5.8e-117 425.2 389 55.8
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 7.5e-117 424.9 383 59.3
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.2e-116 423.3 339 59.9
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.9e-116 422.9 411 54.7
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.9e-116 422.9 411 54.7
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.9e-116 422.9 411 54.7
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.9e-116 422.9 415 54.2
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 6.4e-116 421.8 411 53.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 8.3e-116 421.4 411 53.5
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 8.3e-116 421.4 420 54.3
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 8.3e-116 421.4 422 52.6
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.9e-115 420.2 416 52.9
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.4e-115 418.7 417 54.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.6e-114 417.2 445 51.5
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.7e-114 416.4 415 54.0
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.5e-114 416.0 339 58.7
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 4.6e-114 415.6 409 52.8
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.3e-113 413.3 417 54.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 3.9e-113 412.5 416 53.6
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.3e-112 409.5 347 58.5
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.1e-111 406.8 415 52.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.1e-111 406.8 416 50.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 6.2e-111 405.2 354 59.6
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.4e-110 403.3 417 52.0
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 5.2e-110 402.1 395 52.4
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.7e-108 397.1 421 49.9
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.9e-108 396.4 355 56.3
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.5e-106 389.4 441 49.9
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 3.5e-106 389.4 441 50.1
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 3.0e-105 386.3 330 56.1
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.5e-104 384.0 340 53.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.9e-104 383.6 339 54.0
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 6.2e-103 378.6 370 53.5
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.2e-101 374.4 288 59.4
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.6e-101 371.7 423 46.6
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-98 364.4 423 46.1
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.9e-97 359.4 306 59.8
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 2.5e-96 356.7 254 66.9
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.4e-91 340.1 430 47.4
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 5.4e-91 339.0 339 49.0
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-90 337.8 338 49.7
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.3e-89 333.6 339 47.5
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 3.3e-88 329.7 344 47.7
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 5.6e-88 328.9 247 62.8
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 6.9e-86 322.0 299 53.8
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.4e-85 319.7 341 47.8
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 7.6e-85 318.5 339 47.2
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 7.6e-85 318.5 437 41.9
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 4.2e-83 312.8 339 46.3
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 9.6e-80 301.6 237 60.8
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 5.3e-78 295.8 273 59.0
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.0e-76 291.6 383 43.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-76 291.2 350 44.9
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.5e-72 276.9 299 46.2
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.5e-72 276.9 237 54.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.7e-72 275.8 352 40.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.7e-72 275.0 352 41.8
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.8e-71 272.7 237 56.1
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.3e-71 272.3 343 42.3
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.1e-70 269.6 344 40.1
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.9e-67 260.8 237 52.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.5e-67 259.2 343 39.4
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.7e-66 256.9 339 42.2
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-64 251.1 350 38.6
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.2e-63 247.3 244 47.5
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 3.2e-51 206.8 392 33.7
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.9e-36 157.1 150 54.0
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 9.4e-35 152.1 413 27.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.2e-29 135.2 156 47.4
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.6e-20 102.8 101 44.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 4.1e-14 83.6 75 49.3
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.7e-13 80.9 87 40.2
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.5e-13 80.5 122 45.9
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.5e-11 74.3 117 36.8
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 9.5e-11 72.4 74 43.2
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.1e-10 71.2 88 44.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.4e-06 56.6 42 69.0


User provided reference genes

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