Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3496 Papaver somniferum HOM05D002970 ORTHO05D007037 2.9e-123 446.0 398 100.0
PSO478G2615 Papaver somniferum HOM05D002970 ORTHO05D007037 3.8e-78 296.2 395 58.7
PSO063G6630 Papaver somniferum HOM05D002970 ORTHO05D007037 7.1e-77 292.0 406 77.8
PSO063G0226 Papaver somniferum HOM05D002970 ORTHO05D007037 1.5e-66 257.7 405 66.7
PSO013G0304 Papaver somniferum HOM05D002970 ORTHO05D007037 1.9e-66 257.3 405 66.7
Aqoxy5G03607 Aquilegia oxysepala HOM05D002970 ORTHO05D007037 3.4e-31 140.2 389 31.4
Dinv11020 Davidia involucrata HOM05D002970 ORTHO05D007037 5.9e-31 139.4 420 31.0
MBI11_g22624_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D007037 2.9e-30 137.1 428 37.1
Dinv14772 Davidia involucrata HOM05D002970 ORTHO05D007037 1.2e-28 131.7 166 50.0
QL03p055853 Quercus lobata HOM05D002970 ORTHO05D007037 5.1e-27 126.3 387 44.2
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 6.7e-27 125.9 443 29.1
GSVIVG01010295001 Vitis vinifera HOM05D002970 ORTHO05D007037 1.3e-25 121.7 204 45.1
CiPaw.05G175500 Carya illinoinensis HOM05D002970 ORTHO05D007037 1.1e-24 118.6 225 37.8
vmacro01100 Vaccinium macrocarpon HOM05D002970 ORTHO05D007037 1.1e-24 118.6 420 27.1
Actinidia08107 Actinidia chinensis HOM05D002970 ORTHO05D007037 1.8e-24 117.9 387 26.9
Duzib268G0346 Durio zibethinus HOM05D002970 ORTHO05D007037 2.4e-24 117.5 387 37.0
Gohir.A03G130800 Gossypium hirsutum HOM05D002970 ORTHO05D007037 3.1e-24 117.1 390 29.0
Gorai.005G173600 Gossypium raimondii HOM05D002970 ORTHO05D007037 9.1e-24 115.5 390 29.0
Duzib268G0312 Durio zibethinus HOM05D002970 ORTHO05D007037 1.6e-23 114.8 387 37.7
Nitab4.5_0000041g0280 Nicotiana tabacum HOM05D002970 ORTHO05D007037 5.9e-23 112.8 193 40.9
Eucgr.H04698 Eucalyptus grandis HOM05D002970 ORTHO05D007037 7.7e-23 112.5 256 34.8
Manes.12G018200 Manihot esculenta HOM05D002970 ORTHO05D007037 8.5e-22 109.0 193 37.8
Sed0022070 Sechium edule HOM05D002970 ORTHO05D007037 1.5e-21 108.2 193 38.3
Gohir.D01G153501 Gossypium hirsutum HOM05D002970 ORTHO05D007037 4.2e-21 106.7 387 37.5
Peaxi162Scf00128g00725 Petunia axillaris HOM05D002970 ORTHO05D007037 9.4e-21 105.5 387 27.1
Lsat_1_v5_gn_8_150420 Lactuca sativa HOM05D002970 ORTHO05D007037 1.4e-19 101.7 222 37.4
Thecc.02G269400 Theobroma cacao HOM05D002970 ORTHO05D007037 1.8e-19 101.3 115 51.3
Haze_12310 Corylus avellana HOM05D002970 ORTHO05D007037 2.3e-19 100.9 131 46.6
ECA246G5228 Erigeron canadensis HOM05D002970 ORTHO05D001380 5.2e-19 99.8 229 36.2
Solyc05g014200.3 Solanum lycopersicum HOM05D002970 ORTHO05D007037 1.5e-18 98.2 200 36.5
CDE09G0990 Ceratophyllum demersum HOM05D002970 ORTHO05D007037 1.3e-17 95.1 228 33.3
Sed0018065 Sechium edule HOM05D002970 ORTHO05D007037 1.3e-17 95.1 225 31.6
CAN.G49.7 Capsicum annuum HOM05D002970 ORTHO05D007037 8.2e-17 92.4 225 32.9
CDE02G3172 Ceratophyllum demersum HOM05D002970 ORTHO05D007037 1.1e-16 92.0 231 32.5
ClCG05G026190 Citrullus lanatus HOM05D002970 ORTHO05D007037 1.8e-16 91.3 221 33.9
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 3.1e-16 90.5 194 36.1
Cc11_g16290 Coffea canephora HOM05D002970 ORTHO05D007037 3.1e-16 90.5 186 37.6
AUR62005543 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.2e-15 88.6 228 30.7
MELO3C011904.2 Cucumis melo HOM05D002970 ORTHO05D007037 1.6e-15 88.2 121 42.1
Glyma.18G011200 Glycine max HOM05D002970 ORTHO05D007037 2.0e-15 87.8 121 44.6
TWI36G0141 Tripterygium wilfordii HOM05D002970 ORTHO05D007037 2.7e-15 87.4 176 36.4
HanXRQChr12g0372101 Helianthus annuus HOM05D002970 ORTHO05D007037 3.5e-15 87.0 210 35.2
ECA233G2191 Erigeron canadensis HOM05D002970 ORTHO05D007037 7.7e-15 85.9 267 28.1
Lj3A1063T61 Lonicera japonica HOM05D002970 ORTHO05D007037 7.7e-15 85.9 226 35.0
FAN07G0847 Fragaria x ananassa HOM05D002970 ORTHO05D007037 1.0e-14 85.5 96 49.0
Glyma.11G246000 Glycine max HOM05D002970 ORTHO05D007037 1.0e-14 85.5 112 45.5
Atru.chr11.2207 Acer truncatum HOM05D002970 ORTHO05D007037 1.3e-14 85.1 243 32.9
CsaV3_5G030650 Cucumis sativus L. HOM05D002970 ORTHO05D007037 2.2e-14 84.3 219 34.2
unitig_749.g13283 Utricularia gibba HOM05D002970 ORTHO05D007037 6.5e-14 82.8 225 30.2
Gohir.D02G154501 Gossypium hirsutum HOM05D002970 ORTHO05D007037 8.5e-14 82.4 409 25.7
Lj6g0025430 Lotus japonicus HOM05D002970 ORTHO05D007037 8.5e-14 82.4 112 44.6
FvH4_4g24950 Fragaria vesca HOM05D002970 ORTHO05D007037 1.9e-13 81.3 96 47.9
FAN12G3366 Fragaria x ananassa HOM05D002970 ORTHO05D007037 1.9e-13 81.3 96 47.9
FAN22G0223 Fragaria x ananassa HOM05D002970 ORTHO05D007037 1.9e-13 81.3 96 47.9
CANSAT01G0097 Cannabis sativa HOM05D002970 ORTHO05D007037 3.2e-13 80.5 200 37.5
Ca_25118_v3 Cicer arietinum L. HOM05D002970 ORTHO05D007037 7.2e-13 79.3 117 39.3
Phvul.001G257700 Phaseolus vulgaris HOM05D002970 ORTHO05D007037 7.2e-13 79.3 110 42.7
PGR119G0825 Punica granatum HOM05D002970 ORTHO05D007037 7.2e-13 79.3 257 29.2
Lalb_Chr23g0277811 Lupinus albus HOM05D002970 ORTHO05D007037 1.2e-12 78.6 112 41.1
EL10As2g23227 Beta vulgaris HOM05D002970 ORTHO05D007037 2.1e-12 77.8 194 32.0
Psat5g093520 Pisum sativum HOM05D002970 ORTHO05D007037 2.1e-12 77.8 218 31.2
Nitab4.5_0007823g0020 Nicotiana tabacum HOM05D002970 ORTHO05D007037 2.7e-12 77.4 88 51.1
VMungo1383G0211 Vigna mungo HOM05D002970 ORTHO05D007037 3.6e-12 77.0 105 42.9
CAN.G508.16 Capsicum annuum HOM05D002970 ORTHO05D007037 4.7e-12 76.6 108 42.6
Duzib251G0656 Durio zibethinus HOM05D002970 ORTHO05D007037 4.7e-12 76.6 72 54.2
Potri.010G052600 Populus trichocarpa HOM05D002970 ORTHO05D007037 4.7e-12 76.6 285 28.8
Zm00001eb246290 Zea mays HOM05D002970 ORTHO05D007037 6.1e-12 76.3 196 29.6
EL10Ac6g15185 Beta vulgaris HOM05D002970 ORTHO05D007037 1.4e-11 75.1 191 32.5
Prupe.1G238600 Prunus persica HOM05D002970 ORTHO05D007037 1.4e-11 75.1 90 47.8
Rhsim12G0037200 Rhododendron simsii HOM05D002970 ORTHO05D007037 1.8e-11 74.7 86 45.3
Sc11g0000790 Simmondsia chinensis HOM05D002970 ORTHO05D007037 2.3e-11 74.3 145 34.5
Medtr3g086150 Medicago truncatula HOM05D002970 ORTHO05D007037 4.0e-11 73.6 101 43.6
Cpa.g.sc86.7 Carica papaya HOM05D002970 ORTHO05D007037 6.8e-11 72.8 225 28.9
Actinidia30693 Actinidia chinensis HOM05D002970 ORTHO05D007037 8.8e-11 72.4 89 46.1
MD13G1107800 Malus domestica HOM05D002970 ORTHO05D007037 4.4e-10 70.1 282 29.1
unitig_35.g30192 Utricularia gibba HOM05D002970 ORTHO05D007037 4.4e-10 70.1 126 31.0
Gorai.002G190100 Gossypium raimondii HOM05D002970 ORTHO05D007037 1.7e-09 68.2 387 34.9
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 2.2e-09 67.8 238 28.6
CSS0037497 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D007037 2.8e-09 67.4 128 35.2
MD16G1107700 Malus domestica HOM05D002970 ORTHO05D007037 2.8e-09 67.4 78 48.7
C05p25820 Brassica napus HOM05D002970 ORTHO05D007037 3.7e-09 67.0 117 34.2
SGA_v2.0_scaffold100G29587 Striga asiatica HOM05D002970 ORTHO05D007037 4.8e-09 66.6 232 28.0
RcHm_v2.0_Chr4g0431991 Rosa chinensis HOM05D002970 ORTHO05D007037 1.8e-08 64.7 87 46.0
arahy.Tifrunner.gnm1.ann1.CS70SB Arachis hypogaea HOM05D002970 ORTHO05D007037 2.4e-08 64.3 217 29.0
BcaC05g26524 Brassica carinata HOM05D002970 ORTHO05D007037 3.1e-08 63.9 101 37.6
Sopen05g009230 Solanum pennellii HOM05D002970 ORTHO05D007037 3.1e-08 63.9 258 28.7
BolC5t31302H Brassica oleracea HOM05D002970 ORTHO05D007037 4.1e-08 63.5 98 37.8
Lsat_1_v5_gn_3_29221 Lactuca sativa HOM05D002970 ORTHO05D007037 4.1e-08 63.5 118 40.7
Sp1g23340 Schrenkiella parvula HOM05D002970 ORTHO05D007037 4.1e-08 63.5 99 37.4
THA.LOC104825534 Tarenaya hassleriana HOM05D002970 ORTHO05D007037 4.1e-08 63.5 147 33.3
arahy.Tifrunner.gnm1.ann1.9A7Q93 Arachis hypogaea HOM05D002970 ORTHO05D007037 5.4e-08 63.2 218 28.9
DCAR_031175 Daucus carota HOM05D002970 ORTHO05D007037 7.0e-08 62.8 235 28.1
HPP92_009917 Vanilla planifolia HOM05D002970 ORTHO05D007037 7.0e-08 62.8 101 37.6
MSTRG.540 Avicennia marina HOM05D002970 ORTHO05D007037 1.2e-07 62.0 85 38.8
Ciclev10030479m.g Citrus clementina HOM05D002970 ORTHO05D007037 1.6e-07 61.6 78 38.5
Carub.0001s2565 Capsella rubella HOM05D002970 ORTHO05D007037 2.7e-07 60.8 85 40.0
TPR.G14240 Trifolium pratense HOM05D002970 ORTHO05D007037 3.5e-07 60.5 87 42.5
Ah.03g133670 Amaranthus hybridus HOM05D002970 ORTHO05D007037 4.5e-07 60.1 97 32.0
BcaC05g26716 Brassica carinata HOM05D002970 ORTHO05D007037 4.5e-07 60.1 107 35.5
SEGI_07626 Sequoiadendron giganteum HOM05D005366 ORTHO05D006323 1.3e-06 58.5 176 27.8
SEGI_37710 Sequoiadendron giganteum HOM05D005366 ORTHO05D006323 1.3e-06 58.5 176 27.8
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.7e-06 58.2 478 29.1
Migut.K00673 Erythranthe guttata HOM05D002970 ORTHO05D007037 1.7e-06 58.2 78 38.5
AL1G40480 Arabidopsis lyrata HOM05D002970 ORTHO05D007037 8.5e-06 55.8 79 43.0


User provided reference genes

Program Settings