Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3466 Papaver somniferum HOM05D002729 ORTHO05D003163 8.2e-171 603.6 298 100.0
PSO170G3342 Papaver somniferum HOM05D002729 ORTHO05D305508 6.4e-99 364.8 429 51.5
PSO063G4288 Papaver somniferum HOM05D002729 ORTHO05D305335 3.5e-97 359.0 456 49.1
PSO063G2107 Papaver somniferum HOM05D005384 ORTHO05D006477 8.3e-30 135.2 85 80.0
PSO104G0109 Papaver somniferum HOM05D002729 ORTHO05D003163 1.5e-26 124.4 90 67.8
PSO104G0166 Papaver somniferum HOM05D002729 ORTHO05D003163 7.3e-26 122.1 89 67.4
PSO104G0092 Papaver somniferum HOM05D002729 ORTHO05D003163 8.3e-22 108.6 189 41.8
PSO421G0048 Papaver somniferum HOM05D017630 ORTHO05D304139 9.2e-21 105.1 134 48.5
PSO724G0625 Papaver somniferum HOM05D005384 ORTHO05D006477 3.9e-19 99.8 78 64.1
PSO104G0168 Papaver somniferum HOM05D017630 ORTHO05D003163 5.0e-19 99.4 84 61.9
MBI15_g33456_MAGBIO Magnolia biondii HOM05D002729 ORTHO05D003163 8.1e-17 92.0 82 58.5
Ah.09g233880 Amaranthus hybridus HOM05D002729 ORTHO05D003163 5.2e-16 89.4 256 30.1
ATR0796G047 Amborella trichopoda HOM05D002729 ORTHO05D003163 3.7e-14 83.2 82 52.4
PSO063G4782 Papaver somniferum HOM05D002729 ORTHO05D302173 1.1e-13 81.6 96 49.0
QL11p057171 Quercus lobata HOM05D002729 ORTHO05D003163 1.4e-13 81.3 83 48.2
QL11p057597 Quercus lobata HOM05D002729 ORTHO05D003163 1.4e-13 81.3 83 48.2
EL10Ac8g20265 Beta vulgaris HOM05D002729 ORTHO05D003163 1.9e-13 80.9 113 42.5
Nn3g16166 Nelumbo nucifera HOM05D002729 ORTHO05D003163 1.9e-13 80.9 83 51.8
PGSC0003DMG400024167 Solanum tuberosum HOM05D002729 ORTHO05D003163 1.9e-13 80.9 88 47.7
Actinidia38844 Actinidia chinensis HOM05D002729 ORTHO05D003163 2.4e-13 80.5 113 42.5
Solyc10g024330.3 Solanum lycopersicum HOM05D002729 ORTHO05D003163 2.4e-13 80.5 84 45.2
Cc02_g22490 Coffea canephora HOM05D002729 ORTHO05D003163 3.2e-13 80.1 82 53.7
Sc18g0004140 Simmondsia chinensis HOM05D002729 ORTHO05D003163 4.1e-13 79.7 78 51.3
Migut.B00837 Erythranthe guttata HOM05D002729 ORTHO05D003163 1.6e-12 77.8 57 64.9
HPP92_003448 Vanilla planifolia HOM05D002729 ORTHO05D003163 1.6e-12 77.8 89 43.8
Actinidia26322 Actinidia chinensis HOM05D002729 ORTHO05D003163 2.1e-12 77.4 79 49.4
Dinv41997 Davidia involucrata HOM05D002729 ORTHO05D003163 2.1e-12 77.4 66 54.5
Haze_02479 Corylus avellana HOM05D002729 ORTHO05D003163 2.7e-12 77.0 83 47.0
CiPaw.05G096200 Carya illinoinensis HOM05D002729 ORTHO05D003163 3.5e-12 76.6 83 45.8
Prupe.8G184200 Prunus persica HOM05D002729 ORTHO05D003163 3.5e-12 76.6 75 50.7
Rhsim05G0044300 Rhododendron simsii HOM05D002729 ORTHO05D003163 4.6e-12 76.3 79 49.4
PSO017G4879 Papaver somniferum HOM05D002729 ORTHO05D003163 6.0e-12 75.9 88 45.5
PSO478G5186 Papaver somniferum HOM05D002729 ORTHO05D003163 6.0e-12 75.9 88 45.5
Zm00001eb318200 Zea mays HOM05D002729 ORTHO05D003163 7.8e-12 75.5 74 48.6
CiPaw.06G112500 Carya illinoinensis HOM05D002729 ORTHO05D003163 1.0e-11 75.1 113 39.8
Eucgr.H01461 Eucalyptus grandis HOM05D002729 ORTHO05D003163 1.0e-11 75.1 84 46.4
Hund04402 Selenicereus undatus HOM05D002729 ORTHO05D003163 1.0e-11 75.1 91 45.1
MSTRG.5230 Avicennia marina HOM05D002729 ORTHO05D003163 1.3e-11 74.7 90 44.4
AUR62012848 Chenopodium quinoa HOM05D002729 ORTHO05D003163 1.3e-11 74.7 88 44.3
GSVIVG01023835001 Vitis vinifera HOM05D002729 ORTHO05D003163 1.7e-11 74.3 78 51.3
Duzib132G1137 Durio zibethinus HOM05D002729 ORTHO05D003163 2.3e-11 73.9 78 51.3
Hund23013 Selenicereus undatus HOM05D002729 ORTHO05D003163 2.3e-11 73.9 84 46.4
Nitab4.5_0000816g0020 Nicotiana tabacum HOM05D002729 ORTHO05D003163 3.0e-11 73.6 82 50.0
Nitab4.5_0003344g0010 Nicotiana tabacum HOM05D002729 ORTHO05D003163 3.0e-11 73.6 82 50.0
TAR623G1398 Trochodendron aralioides HOM05D002729 ORTHO05D003163 3.0e-11 73.6 88 48.9
Duzib052G0449 Durio zibethinus HOM05D002729 ORTHO05D003163 3.9e-11 73.2 75 52.0
SGA_v2.0_scaffold1G00307 Striga asiatica HOM05D002729 ORTHO05D003163 3.9e-11 73.2 83 45.8
Migut.N01043 Erythranthe guttata HOM05D002729 ORTHO05D003163 5.1e-11 72.8 88 45.5
Lalb_Chr18g0048741 Lupinus albus HOM05D002729 ORTHO05D003163 5.1e-11 72.8 83 47.0
Aqoxy3G01889 Aquilegia oxysepala HOM05D002729 ORTHO05D003163 6.6e-11 72.4 71 50.7
Lalb_Chr15g0079841 Lupinus albus HOM05D002729 ORTHO05D003163 6.6e-11 72.4 83 45.8
Ciclev10012463m.g Citrus clementina HOM05D002729 ORTHO05D003163 8.6e-11 72.0 78 48.7
CSS0015863 Camellia sinensis var. sinensis HOM05D002729 ORTHO05D003163 1.1e-10 71.6 67 49.3
AUR62021812 Chenopodium quinoa HOM05D002729 ORTHO05D003163 1.1e-10 71.6 88 43.2
Duzib248G0051 Durio zibethinus HOM05D002729 ORTHO05D003163 1.1e-10 71.6 79 46.8
Eucgr.I01557 Eucalyptus grandis HOM05D002729 ORTHO05D003163 1.1e-10 71.6 87 42.5
Lj3g0011769 Lotus japonicus HOM05D002729 ORTHO05D003163 1.1e-10 71.6 83 44.6
MSTRG.27844 Avicennia marina HOM05D002729 ORTHO05D003163 1.5e-10 71.2 52 67.3
CDE06G1931 Ceratophyllum demersum HOM05D002729 ORTHO05D003163 1.5e-10 71.2 82 47.6
Lalb_Chr15g0079821 Lupinus albus HOM05D002729 ORTHO05D003163 1.5e-10 71.2 83 47.0
unitig_8.g2955 Utricularia gibba HOM05D000760 ORTHO05D000618 1.5e-10 71.2 85 48.2
Pp3c8_5700 Physcomitrium patens HOM05D002729 ORTHO05D003163 1.9e-10 70.9 55 56.4
Pp3c8_5730 Physcomitrium patens HOM05D002729 ORTHO05D003163 1.9e-10 70.9 55 56.4
SalBow5G1968 Salvia bowleyana HOM05D002729 ORTHO05D003163 1.9e-10 70.9 87 42.5
AagrBONN_evm.TU.Sc2ySwM_344.2824 Anthoceros agrestis HOM05D002729 ORTHO05D003163 3.3e-10 70.1 61 54.1
Zm00001eb064650 Zea mays HOM05D002729 ORTHO05D003163 4.3e-10 69.7 84 46.4
AT4G35450 Arabidopsis thaliana HOM05D002729 ORTHO05D003163 5.6e-10 69.3 90 42.2
CARHR243760 Cardamine hirsuta HOM05D002729 ORTHO05D003163 5.6e-10 69.3 63 50.8
Gohir.A13G063600 Gossypium hirsutum HOM05D002729 ORTHO05D003163 5.6e-10 69.3 71 46.5
Gohir.D13G058300 Gossypium hirsutum HOM05D002729 ORTHO05D003163 5.6e-10 69.3 71 46.5
Gorai.013G065700 Gossypium raimondii HOM05D002729 ORTHO05D003163 5.6e-10 69.3 71 46.5
PGR042G1728 Punica granatum HOM05D002729 ORTHO05D003163 5.6e-10 69.3 81 46.9
SalBow6G2707 Salvia bowleyana HOM05D002729 ORTHO05D003163 5.6e-10 69.3 64 50.0
HPP92_024679 Vanilla planifolia HOM05D002729 ORTHO05D003163 5.6e-10 69.3 50 64.0
AL7G15720 Arabidopsis lyrata HOM05D002729 ORTHO05D003163 7.3e-10 68.9 90 42.2
FAN15G2193 Fragaria x ananassa HOM05D002729 ORTHO05D003163 7.3e-10 68.9 54 59.3
Os03g0851700 Oryza sativa ssp. japonica HOM05D002729 ORTHO05D003163 7.3e-10 68.9 56 58.9
unitig_749.g14124 Utricularia gibba HOM05D002729 ORTHO05D003163 7.3e-10 68.9 84 42.9
Carub.0007s0488 Capsella rubella HOM05D002729 ORTHO05D003163 9.5e-10 68.6 90 41.1
Ca_14122_v3 Cicer arietinum L. HOM05D002729 ORTHO05D003163 9.5e-10 68.6 79 45.6
BcaNung06458 Brassica carinata HOM05D002729 ORTHO05D003163 1.2e-09 68.2 90 41.1
COL.COLO4_38062 Corchorus olitorius HOM05D002729 ORTHO05D003163 2.1e-09 67.4 90 41.1
Gohir.A03G168800 Gossypium hirsutum HOM05D002729 ORTHO05D003163 2.1e-09 67.4 90 36.7
Sc18g0004160 Simmondsia chinensis HOM05D002729 ORTHO05D003163 2.1e-09 67.4 64 50.0
TWI75G1253 Tripterygium wilfordii HOM05D002729 ORTHO05D003163 2.1e-09 67.4 114 42.1
A01p03130 Brassica napus HOM05D002729 ORTHO05D003163 3.6e-09 66.6 90 40.0
BraA01t00297Z Brassica rapa HOM05D002729 ORTHO05D003163 3.6e-09 66.6 90 40.0
CsaV3_7G002290 Cucumis sativus L. HOM05D002729 ORTHO05D003163 3.6e-09 66.6 136 32.4
Thhalv10025639m.g Eutrema salsugineum HOM05D002729 ORTHO05D003163 3.6e-09 66.6 90 38.9
HanXRQChr10g0290711 Helianthus annuus HOM05D002729 ORTHO05D003163 3.6e-09 66.6 82 43.9
unitig_22.g6117 Utricularia gibba HOM05D002729 ORTHO05D003163 3.6e-09 66.6 80 50.0
A08p21870 Brassica napus HOM05D002729 ORTHO05D003163 4.7e-09 66.2 90 40.0
MELO3C024173.2 Cucumis melo HOM05D002729 ORTHO05D003163 4.7e-09 66.2 125 33.6
PSO478G1068 Papaver somniferum HOM05D000004 ORTHO05D000224 4.7e-09 66.2 56 57.1
Sed0015707 Sechium edule HOM05D002729 ORTHO05D003163 4.7e-09 66.2 78 46.2
Hund04400 Selenicereus undatus HOM05D002729 ORTHO05D003163 4.7e-09 66.2 81 46.9
Psat5g231000 Pisum sativum HOM05D002729 ORTHO05D003163 6.2e-09 65.9 84 44.0
Sed0012003 Sechium edule HOM05D002729 ORTHO05D003163 6.2e-09 65.9 75 48.0
BcaNung02391 Brassica carinata HOM05D002729 ORTHO05D003163 8.1e-09 65.5 90 40.0
C03p80670 Brassica napus HOM05D002729 ORTHO05D003163 8.1e-09 65.5 63 47.6
C07p61140 Brassica napus HOM05D002729 ORTHO05D003163 8.1e-09 65.5 90 40.0
Sp7g33220 Schrenkiella parvula HOM05D002729 ORTHO05D003163 8.1e-09 65.5 63 47.6
BcaNung00593 Brassica carinata HOM05D002729 ORTHO05D003163 1.1e-08 65.1 63 47.6
C01p03480 Brassica napus HOM05D002729 ORTHO05D003163 1.1e-08 65.1 90 38.9
BolC1t00335H Brassica oleracea HOM05D002729 ORTHO05D003163 1.1e-08 65.1 90 38.9
SEGI_04196 Sequoiadendron giganteum HOM05D002729 ORTHO05D003163 1.1e-08 65.1 123 35.8
PSO478G4155 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-08 64.7 64 50.0
Sabra04G0141800 Salix brachista HOM05D002729 ORTHO05D003163 1.4e-08 64.7 82 42.7
TWI31G0290 Tripterygium wilfordii HOM05D002729 ORTHO05D003163 1.4e-08 64.7 107 37.4
CBR_g37530 Chara braunii HOM05D002729 ORTHO05D003163 1.8e-08 64.3 53 50.9
PSO017G2663 Papaver somniferum HOM05D002729 ORTHO05D302867 1.8e-08 64.3 65 50.8
THA.LOC104807416 Tarenaya hassleriana HOM05D002729 ORTHO05D003163 1.8e-08 64.3 106 35.8
TPR.G16696 Trifolium pratense HOM05D002729 ORTHO05D003163 1.8e-08 64.3 84 42.9
BolC3t20310H Brassica oleracea HOM05D002729 ORTHO05D003163 2.3e-08 63.9 63 47.6
BcaB03g12412 Brassica carinata HOM05D002729 ORTHO05D003163 3.1e-08 63.5 63 46.0
A03p63550 Brassica napus HOM05D002729 ORTHO05D003163 3.1e-08 63.5 63 46.0
BraA03t15425Z Brassica rapa HOM05D002729 ORTHO05D003163 3.1e-08 63.5 63 46.0
CDE06G2216 Ceratophyllum demersum HOM05D002729 ORTHO05D003163 3.1e-08 63.5 72 45.8
FAN27G2173 Fragaria x ananassa HOM05D002729 ORTHO05D003163 3.1e-08 63.5 54 55.6
Manes.15G112200 Manihot esculenta HOM05D002729 ORTHO05D003163 3.1e-08 63.5 64 51.6
CDE04G0411 Ceratophyllum demersum HOM05D002729 ORTHO05D003163 4.0e-08 63.2 73 46.6
Sabra04G0141700 Salix brachista HOM05D002729 ORTHO05D003163 4.0e-08 63.2 82 41.5
Sed0002453 Sechium edule HOM05D002729 ORTHO05D003163 4.0e-08 63.2 44 61.4
arahy.Tifrunner.gnm1.ann1.24ZDA8 Arachis hypogaea HOM05D002729 ORTHO05D003163 5.2e-08 62.8 83 47.0
arahy.Tifrunner.gnm1.ann1.AX1616 Arachis hypogaea HOM05D002729 ORTHO05D003163 5.2e-08 62.8 83 47.0
CARHR107550 Cardamine hirsuta HOM05D002729 ORTHO05D003163 5.2e-08 62.8 105 37.1
Lj5A252T46 Lonicera japonica HOM05D002729 ORTHO05D003163 5.2e-08 62.8 64 46.9
Manes.15G112400 Manihot esculenta HOM05D002729 ORTHO05D003163 6.8e-08 62.4 63 52.4
AL3G50270 Arabidopsis lyrata HOM05D002729 ORTHO05D003163 1.2e-07 61.6 90 34.4
AT2G17390 Arabidopsis thaliana HOM05D002729 ORTHO05D003163 1.2e-07 61.6 90 34.4
BcaC01g00495 Brassica carinata HOM05D002729 ORTHO05D003163 1.2e-07 61.6 63 46.0
ECA240G4174 Erigeron canadensis HOM05D002729 ORTHO05D003163 1.2e-07 61.6 66 53.0
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 1.2e-07 61.6 57 54.4
PGR142G1892 Punica granatum HOM05D002729 ORTHO05D003163 1.2e-07 61.6 88 37.5
PSO339G2244 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-07 61.2 41 63.4
THA.LOC104804301 Tarenaya hassleriana HOM05D002729 ORTHO05D003163 1.5e-07 61.2 52 51.9
TAR625G0581 Trochodendron aralioides HOM05D002729 ORTHO05D003163 1.5e-07 61.2 57 52.6
Aa31LG6G12430 Aethionema arabicum HOM05D002729 ORTHO05D003163 2.0e-07 60.8 90 37.8
ClCG02G003120 Citrullus lanatus HOM05D002729 ORTHO05D003163 2.0e-07 60.8 125 31.2
PSO832G0593 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-07 60.5 56 55.4
PSO832G2895 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-07 60.5 56 55.4
BcaNung03629 Brassica carinata HOM05D002729 ORTHO05D003163 3.4e-07 60.1 90 38.9
MELO3C013470.2 Cucumis melo HOM05D002729 ORTHO05D003163 3.4e-07 60.1 66 47.0
CsaV3_6G009840 Cucumis sativus L. HOM05D002729 ORTHO05D003163 3.4e-07 60.1 66 47.0
HanXRQChr09g0246081 Helianthus annuus HOM05D002729 ORTHO05D003163 3.4e-07 60.1 76 46.1
Carub.0003s3144 Capsella rubella HOM05D002729 ORTHO05D003163 4.4e-07 59.7 81 42.0
CAN.G1577.22 Capsicum annuum HOM05D002729 ORTHO05D003163 4.4e-07 59.7 64 48.4
ClCG02G010650 Citrullus lanatus HOM05D002729 ORTHO05D003163 4.4e-07 59.7 66 47.0
Peaxi162Scf00011g00428 Petunia axillaris HOM05D002729 ORTHO05D003163 4.4e-07 59.7 65 52.3
CDE07G1191 Ceratophyllum demersum HOM05D002729 ORTHO05D003163 5.8e-07 59.3 71 46.5
FvH4_2g17270 Fragaria vesca HOM05D002729 ORTHO05D003163 5.8e-07 59.3 54 51.9
FAN27G0632 Fragaria x ananassa HOM05D002729 ORTHO05D003163 5.8e-07 59.3 54 51.9
Nitab4.5_0005103g0030 Nicotiana tabacum HOM05D002729 ORTHO05D003163 5.8e-07 59.3 79 44.3
Phvul.005G006400 Phaseolus vulgaris HOM05D002729 ORTHO05D003163 5.8e-07 59.3 66 50.0
Solyc01g104170.3 Solanum lycopersicum HOM05D002729 ORTHO05D003163 5.8e-07 59.3 64 50.0
Sopen01g046610 Solanum pennellii HOM05D002729 ORTHO05D003163 5.8e-07 59.3 64 50.0
BraA08t34140Z Brassica rapa HOM05D002729 ORTHO05D003163 7.6e-07 58.9 101 36.6
Gohir.D04G150700 Gossypium hirsutum HOM05D002729 ORTHO05D003163 7.6e-07 58.9 66 51.5
FAN24G3453 Fragaria x ananassa HOM05D002729 ORTHO05D003163 9.9e-07 58.5 75 41.3
Gorai.008G012100 Gossypium raimondii HOM05D002729 ORTHO05D003163 9.9e-07 58.5 63 52.4
PSO017G1176 Papaver somniferum HOM05D000004 ORTHO05D000224 9.9e-07 58.5 42 57.1
Hund22926 Selenicereus undatus HOM05D002729 ORTHO05D003163 9.9e-07 58.5 79 44.3
PGSC0003DMG401023760 Solanum tuberosum HOM05D002729 ORTHO05D003163 9.9e-07 58.5 64 50.0
Oeu008893.2 Olea europaea HOM05D002729 ORTHO05D003163 1.7e-06 57.8 56 50.0
Thecc.02G150200 Theobroma cacao HOM05D002729 ORTHO05D003163 1.7e-06 57.8 63 46.0
Lsat_1_v5_gn_9_118940 Lactuca sativa HOM05D002729 ORTHO05D003163 2.2e-06 57.4 69 46.4
Sp3g30720 Schrenkiella parvula HOM05D002729 ORTHO05D003163 2.2e-06 57.4 81 38.3
Gohir.D12G012000 Gossypium hirsutum HOM05D002729 ORTHO05D003163 2.9e-06 57.0 63 50.8
Gohir.A04G110400 Gossypium hirsutum HOM05D002729 ORTHO05D003163 3.8e-06 56.6 66 50.0
Gorai.012G137300 Gossypium raimondii HOM05D002729 ORTHO05D003163 3.8e-06 56.6 65 50.8
VMungo1080G1192 Vigna mungo HOM05D002729 ORTHO05D003163 3.8e-06 56.6 65 49.2
arahy.Tifrunner.gnm1.ann1.JT7AJ7 Arachis hypogaea HOM05D002729 ORTHO05D003163 4.9e-06 56.2 57 45.6
CANSAT25G1626 Cannabis sativa HOM05D002729 ORTHO05D003163 4.9e-06 56.2 64 43.8
Mapoly0142s0007 Marchantia polymorpha HOM05D002729 ORTHO05D003163 4.9e-06 56.2 39 59.0
vmacro10879 Vaccinium macrocarpon HOM05D002729 ORTHO05D003163 4.9e-06 56.2 61 44.3
Thhalv10022709m.g Eutrema salsugineum HOM05D002729 ORTHO05D003163 6.4e-06 55.8 82 39.0
Glyma.06G320200 Glycine max HOM05D002729 ORTHO05D003163 6.4e-06 55.8 62 50.0
PRCOL_00004933 Prasinoderma coloniale HOM05D002729 ORTHO05D003163 6.4e-06 55.8 50 54.0
SMO228G0133 Selaginella moellendorffii HOM05D002729 ORTHO05D003163 6.4e-06 55.8 36 63.9
Glyma.04G116500 Glycine max HOM05D002729 ORTHO05D003163 8.4e-06 55.5 60 51.7


User provided reference genes

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