Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 5.9e-201 704.1 390 100.0
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 6.1e-198 694.1 390 97.7
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 1.3e-163 580.1 390 83.3
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 1.4e-162 576.6 390 82.6
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 5.0e-160 568.2 390 79.2
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.9e-159 566.2 390 78.2
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 2.8e-158 562.4 389 77.4
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 1.0e-157 560.5 389 76.6
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 7.5e-156 554.3 385 78.7
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 9.8e-156 553.9 390 78.7
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 9.8e-156 553.9 387 80.6
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 1.4e-154 550.1 389 75.6
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 5.4e-154 548.1 387 76.2
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 2.7e-153 545.8 390 79.7
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 5.9e-153 544.7 374 80.5
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 5.9e-153 544.7 387 79.6
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 1.3e-152 543.5 368 79.9
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 2.3e-152 542.7 368 83.2
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 2.3e-152 542.7 389 78.9
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 2.9e-152 542.3 392 76.5
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 1.1e-151 540.4 385 78.2
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 1.9e-151 539.7 389 74.3
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 2.5e-151 539.3 370 78.6
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 4.3e-151 538.5 390 74.6
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 9.5e-151 537.3 390 79.5
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 1.6e-150 536.6 389 75.1
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 2.8e-150 535.8 383 75.2
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 3.6e-150 535.4 368 78.5
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.0e-149 533.9 390 78.2
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 2.3e-149 532.7 390 78.5
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.1e-149 532.3 390 77.9
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 2.6e-148 529.3 367 77.4
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 2.6e-148 529.3 389 74.3
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 3.4e-148 528.9 368 77.7
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 3.4e-148 528.9 389 74.6
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 5.8e-148 528.1 368 77.4
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 5.8e-148 528.1 369 77.5
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 7.5e-148 527.7 390 75.9
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.3e-147 526.9 371 80.1
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 2.9e-147 525.8 372 80.1
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 4.9e-147 525.0 365 78.1
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 4.9e-147 525.0 389 73.5
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 8.3e-147 524.2 377 78.8
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.1e-146 523.9 390 75.6
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 1.9e-146 523.1 391 77.0
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 3.2e-146 522.3 392 73.2
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 4.1e-146 521.9 364 77.2
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 4.1e-146 521.9 391 76.2
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 4.1e-146 521.9 391 76.2
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 7.0e-146 521.2 390 75.4
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 9.2e-146 520.8 351 78.3
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.2e-145 520.4 352 84.9
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 1.2e-145 520.4 370 76.5
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 1.6e-145 520.0 391 76.0
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 6.0e-145 518.1 369 76.7
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.3e-144 516.9 392 76.8
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 6.6e-144 514.6 368 79.1
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 1.1e-143 513.8 389 75.8
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 7.3e-143 511.1 377 75.3
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 9.5e-143 510.8 359 76.6
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 1.6e-142 510.0 362 79.3
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 2.1e-142 509.6 355 80.0
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 3.6e-142 508.8 368 78.8
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 1.4e-141 506.9 352 79.8
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 2.3e-141 506.1 372 74.7
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 6.8e-141 504.6 352 80.7
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 8.9e-141 504.2 376 75.3
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 1.5e-140 503.4 351 78.1
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 1.5e-140 503.4 388 74.7
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 2.0e-140 503.1 390 72.6
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.0e-140 503.1 399 74.2
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 4.4e-140 501.9 368 76.4
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 4.4e-140 501.9 374 75.7
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 5.8e-140 501.5 376 75.0
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 2.9e-139 499.2 355 78.0
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.9e-139 498.4 388 75.5
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.1e-138 497.3 387 74.9
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 1.1e-138 497.3 368 76.1
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 4.1e-138 495.4 369 72.6
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 1.2e-137 493.8 344 79.7
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 2.1e-137 493.0 344 79.7
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 2.1e-137 493.0 352 79.5
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 1.7e-136 490.0 366 75.7
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 1.7e-136 490.0 363 77.7
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 2.3e-136 489.6 385 76.4
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 5.1e-136 488.4 368 72.8
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 2.1e-134 483.0 362 75.7
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 4.7e-134 481.9 367 73.8
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 4.0e-133 478.8 395 72.4
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 1.2e-132 477.2 322 82.9
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 3.4e-132 475.7 408 68.4
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 4.4e-132 475.3 368 75.8
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 7.6e-132 474.6 368 72.6
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 3.7e-131 472.2 368 74.5
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.9e-130 469.9 369 70.2
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 5.4e-130 468.4 369 69.9
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 7.1e-130 468.0 380 72.9
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.1e-129 466.5 362 74.9
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 1.0e-128 464.2 389 66.1
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 6.6e-128 461.5 370 72.2
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 8.1e-126 454.5 368 70.4
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.8e-125 453.4 363 74.4
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 2.4e-125 453.0 346 72.0
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 2.0e-124 449.9 386 65.5
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 2.6e-124 449.5 371 70.6
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 7.6e-124 448.0 368 71.5
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 7.6e-124 448.0 368 71.5
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 2.2e-123 446.4 346 73.4
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 2.2e-123 446.4 360 71.9
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 4.9e-123 445.3 389 66.8
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 1.1e-122 444.1 356 69.7
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.4e-122 443.7 368 67.7
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 7.1e-122 441.4 353 68.3
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 4.6e-121 438.7 369 70.5
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 6.0e-121 438.3 360 68.1
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.7e-115 420.2 364 70.6
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.9e-115 419.5 368 62.8
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 4.6e-113 412.1 284 83.5
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 7.9e-113 411.4 391 64.5
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 1.0e-112 411.0 314 72.9
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 3.3e-111 406.0 379 66.2
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.8e-110 402.1 349 62.2
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.2e-108 397.5 331 68.6
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 1.6e-105 387.1 267 77.5
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.7e-105 386.3 376 58.5
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.3e-104 383.3 291 73.5
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 6.7e-104 381.7 330 61.8
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 1.4e-101 374.0 358 59.2
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.6e-100 369.8 299 64.5
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 7.1e-98 361.7 355 57.7
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.6e-97 359.0 287 74.6
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 1.5e-95 354.0 355 56.3
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 2.1e-94 350.1 255 76.9
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 1.8e-93 347.1 223 85.2
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 5.9e-92 342.0 268 69.8
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 2.9e-91 339.7 357 59.4
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 3.3e-87 326.2 287 66.6
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.6e-84 316.6 226 78.8
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 1.7e-67 260.8 184 76.6
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.5e-52 209.9 125 89.6
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 2.7e-44 183.7 141 73.0
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 2.3e-43 180.6 131 77.9
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 1.2e-41 174.9 150 67.3
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 2.6e-39 167.2 143 67.1
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 2.0e-31 141.0 102 75.5
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 9.8e-31 138.7 97 75.3
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 7.8e-28 129.0 70 84.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 7.8e-28 129.0 70 84.3
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 1.1e-26 125.2 70 82.9
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 4.1e-21 106.7 131 51.9
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.3e-19 101.7 81 71.6
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.0e-19 100.5 99 47.5
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 4.3e-18 96.7 81 66.7
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 2.1e-17 94.4 58 89.7
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.2e-15 88.6 58 87.9
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 3.4e-15 87.0 93 52.7
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 9.2e-13 79.0 68 57.4
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.6e-12 78.2 97 51.5
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 2.7e-12 77.4 132 42.4
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 6.6e-11 72.8 42 83.3
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 4.3e-10 70.1 59 72.9
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 1.2e-09 68.6 262 26.7
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 8.1e-09 65.9 78 47.4
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 8.9e-08 62.4 38 89.5
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 8.9e-08 62.4 163 27.6


User provided reference genes

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