Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3037 Papaver somniferum HOM05D020877 ORTHO05D003486 2.0e-284 981.9 534 100.0
PSO528G0175 Papaver somniferum HOM05D020877 ORTHO05D003486 4.9e-174 615.1 461 75.9
PSO170G0742 Papaver somniferum HOM05D020877 ORTHO05D003486 3.0e-62 243.8 537 35.6
PSO528G0080 Papaver somniferum HOM05D020877 ORTHO05D003486 6.2e-60 236.1 667 31.8
PSO528G0025 Papaver somniferum HOM05D020877 ORTHO05D003486 4.8e-44 183.3 518 33.6
Aqoxy3G01606 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 1.9e-24 118.2 350 28.6
Aqoxy1G03360 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 9.3e-24 115.9 348 29.6
Peaxi162Scf00234g00718 Petunia axillaris HOM05D012804 ORTHO05D003486 1.3e-22 112.1 365 25.5
Nitab4.5_0000205g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 1.3e-20 105.5 424 25.9
Nn5g28446 Nelumbo nucifera HOM05D006236 ORTHO05D003486 1.1e-19 102.4 401 26.9
HPP92_008975 Vanilla planifolia HOM05D006236 ORTHO05D003486 2.4e-19 101.3 382 25.4
Solyc11g072250.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 1.7e-17 95.1 444 24.3
CAN.G1187.8 Capsicum annuum HOM05D012804 ORTHO05D003486 2.9e-17 94.4 416 24.8
Aqoxy6G00303 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 3.8e-17 94.0 211 30.8
Sopen11g029920 Solanum pennellii HOM05D012804 ORTHO05D003486 6.5e-17 93.2 463 23.8
TAR625G0695 Trochodendron aralioides HOM05D006236 ORTHO05D003486 4.6e-15 87.0 193 29.0
FvH4_2g27990 Fragaria vesca HOM05D006236 ORTHO05D003486 1.0e-14 85.9 444 25.0
ATR0824G107 Amborella trichopoda HOM05D049392 ORTHO05D003486 5.1e-14 83.6 348 27.0
BcaC03g15725 Brassica carinata HOM05D009282 ORTHO05D003486 6.7e-14 83.2 198 29.8
BolC2t09471H Brassica oleracea HOM05D009282 ORTHO05D003486 6.7e-14 83.2 198 29.8
C02p34410 Brassica napus HOM05D009282 ORTHO05D003486 8.8e-14 82.8 198 29.8
BraA02t07136Z Brassica rapa HOM05D009282 ORTHO05D003486 1.1e-13 82.4 223 31.4
Sp5g32440 Schrenkiella parvula HOM05D009282 ORTHO05D003486 1.5e-13 82.0 205 33.7
MD15G1133200 Malus domestica HOM05D006236 ORTHO05D003486 2.0e-13 81.6 462 23.8
A02p21190 Brassica napus HOM05D009282 ORTHO05D003486 3.3e-13 80.9 204 31.9
Dinv14700 Davidia involucrata HOM05D006236 ORTHO05D003486 5.7e-13 80.1 224 27.7
Os04g0539100 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 9.7e-13 79.3 338 25.4
FAN15G3020 Fragaria x ananassa HOM05D006236 ORTHO05D003486 1.3e-12 79.0 479 24.0
GSVIVG01008800001 Vitis vinifera HOM05D006236 ORTHO05D003486 1.7e-12 78.6 223 26.9
BcaB05g25029 Brassica carinata HOM05D009282 ORTHO05D003486 2.8e-12 77.8 114 37.7
QL12p002389 Quercus lobata HOM05D006236 ORTHO05D003486 2.8e-12 77.8 133 32.3
Sed0000792 Sechium edule HOM05D006236 ORTHO05D003486 2.8e-12 77.8 352 25.6
CiPaw.03G184300 Carya illinoinensis HOM05D006236 ORTHO05D003486 3.7e-12 77.4 342 23.4
ClCG09G021830 Citrullus lanatus HOM05D006236 ORTHO05D003486 6.3e-12 76.6 408 24.3
Psat0s1315g0200 Pisum sativum HOM05D006236 ORTHO05D003486 1.1e-11 75.9 126 34.9
MD08G1159900 Malus domestica HOM05D006236 ORTHO05D003486 1.8e-11 75.1 518 23.4
CsaV3_7G022170 Cucumis sativus L. HOM05D006236 ORTHO05D003486 2.4e-11 74.7 415 24.6
Nitab4.5_0011766g0010 Nicotiana tabacum HOM05D012804 ORTHO05D003486 2.4e-11 74.7 120 31.7
Potri.002G077500 Populus trichocarpa HOM05D006236 ORTHO05D003486 2.4e-11 74.7 183 31.1
CDE02G3425 Ceratophyllum demersum HOM05D006236 ORTHO05D003486 4.1e-11 73.9 408 25.2
Duzib093G1452 Durio zibethinus HOM05D006236 ORTHO05D003486 4.1e-11 73.9 332 23.8
Thhalv10018476m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 4.1e-11 73.9 221 28.1
Nitab4.5_0003471g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 4.1e-11 73.9 326 25.2
Thecc.08G133800 Theobroma cacao HOM05D006236 ORTHO05D003486 5.3e-11 73.6 354 25.4
CiPaw.11G076600 Carya illinoinensis HOM05D006236 ORTHO05D003486 9.1e-11 72.8 106 34.9
RcHm_v2.0_Chr6g0296811 Rosa chinensis HOM05D006236 ORTHO05D003486 1.2e-10 72.4 388 23.2
Carub.0002s2415 Capsella rubella HOM05D009282 ORTHO05D003486 1.5e-10 72.0 208 30.3
CARHR070750 Cardamine hirsuta HOM05D009282 ORTHO05D003486 1.5e-10 72.0 116 37.1
TAR381G0115 Trochodendron aralioides HOM05D006236 ORTHO05D003486 1.5e-10 72.0 327 26.0
Thhalv10007934m.g Eutrema salsugineum HOM05D012602 ORTHO05D003486 3.4e-10 70.9 188 29.8
Nitab4.5_0001925g0210 Nicotiana tabacum HOM05D012804 ORTHO05D003486 4.5e-10 70.5 120 30.0
Gohir.D02G077800 Gossypium hirsutum HOM05D006236 ORTHO05D003486 5.9e-10 70.1 356 23.0
Os05g0423200 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 5.9e-10 70.1 371 23.2
Aa31LG4G7280 Aethionema arabicum HOM05D009282 ORTHO05D003486 7.7e-10 69.7 150 34.7
AT1G77270 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 7.7e-10 69.7 114 37.7
Os04g0221000 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 7.7e-10 69.7 107 36.4
Aa31LG7G5540 Aethionema arabicum HOM05D012602 ORTHO05D003486 1.0e-09 69.3 117 35.9
Carub.0003s0731 Capsella rubella HOM05D009282 ORTHO05D003486 1.0e-09 69.3 119 33.6
Thhalv10020550m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 1.0e-09 69.3 121 31.4
Medtr1g026790 Medicago truncatula HOM05D006236 ORTHO05D003486 1.0e-09 69.3 117 37.6
THA.LOC104812078 Tarenaya hassleriana HOM05D006236 ORTHO05D003486 1.0e-09 69.3 356 24.4
FAN20G3074 Fragaria x ananassa HOM05D006236 ORTHO05D003486 1.3e-09 68.9 494 23.9
Ciclev10000428m.g Citrus clementina HOM05D006236 ORTHO05D003486 1.7e-09 68.6 110 34.5
FAN24G2475 Fragaria x ananassa HOM05D006236 ORTHO05D003486 1.7e-09 68.6 428 23.8
Peaxi162Scf00062g00089 Petunia axillaris HOM05D012804 ORTHO05D003486 1.7e-09 68.6 120 29.2
Zm00001eb075330 Zea mays HOM05D006236 ORTHO05D003486 1.7e-09 68.6 102 35.3
Atru.chr13.1589 Acer truncatum HOM05D006236 ORTHO05D003486 2.2e-09 68.2 407 25.6
Prupe.1G488800 Prunus persica HOM05D006236 ORTHO05D003486 2.9e-09 67.8 408 22.8
Sed0021928 Sechium edule HOM05D006236 ORTHO05D003486 2.9e-09 67.8 345 23.5
AT3G07730 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 3.8e-09 67.4 122 33.6
Oeu047174.1 Olea europaea HOM05D006236 ORTHO05D003486 3.8e-09 67.4 103 37.9
FAN27G0089 Fragaria x ananassa HOM05D006236 ORTHO05D003486 6.5e-09 66.6 492 23.4
Sp3g06660 Schrenkiella parvula HOM05D009282 ORTHO05D003486 6.5e-09 66.6 155 29.7
DCAR_028204 Daucus carota HOM05D006236 ORTHO05D003486 1.9e-08 65.1 107 31.8
Phvul.009G156700 Phaseolus vulgaris HOM05D006236 ORTHO05D003486 1.9e-08 65.1 112 30.4
Ca_17011_v3 Cicer arietinum L. HOM05D006236 ORTHO05D003486 2.5e-08 64.7 129 31.0
Pp3c8_15980 Physcomitrium patens HOM05D006236 ORTHO05D003486 2.5e-08 64.7 108 31.5
SMO196G0029 Selaginella moellendorffii HOM05D002377 ORTHO05D003486 3.2e-08 64.3 112 33.9
AL2G37450 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 4.2e-08 63.9 114 36.0
AL3G19090 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 5.5e-08 63.5 122 32.8
Actinidia15208 Actinidia chinensis HOM05D006236 ORTHO05D003486 7.2e-08 63.2 363 22.3
CAN.G484.6 Capsicum annuum HOM05D012804 ORTHO05D003486 7.2e-08 63.2 118 30.5
TPR.G28699 Trifolium pratense HOM05D006236 ORTHO05D003486 7.2e-08 63.2 105 30.5
BcaB04g21273 Brassica carinata HOM05D009282 ORTHO05D003486 9.4e-08 62.8 116 33.6
Dinv27264 Davidia involucrata HOM05D006236 ORTHO05D003486 9.4e-08 62.8 175 26.9
Sabra02G0060900 Salix brachista HOM05D006236 ORTHO05D003486 9.4e-08 62.8 107 31.8
SpUn0522_0010 Schrenkiella parvula HOM05D009282 ORTHO05D003486 9.4e-08 62.8 121 30.6
Solyc12g099920.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 1.2e-07 62.4 120 29.2
Lalb_Chr08g0237871 Lupinus albus HOM05D006236 ORTHO05D003486 1.6e-07 62.0 112 29.5
Sopen12g034540 Solanum pennellii HOM05D012804 ORTHO05D003486 1.6e-07 62.0 121 29.8
SMO147G0016 Selaginella moellendorffii HOM05D006236 ORTHO05D003486 2.1e-07 61.6 101 33.7
PSO170G4674 Papaver somniferum HOM05D020877 ORTHO05D003486 2.7e-07 61.2 217 30.0
SEGI_20168 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 2.7e-07 61.2 101 31.7
Manes.02G169100 Manihot esculenta HOM05D006236 ORTHO05D003486 4.7e-07 60.5 41 65.9
PGSC0003DMG400004651 Solanum tuberosum HOM05D012804 ORTHO05D003486 4.7e-07 60.5 121 29.8
AT1G21560 Arabidopsis thaliana HOM05D012602 ORTHO05D003486 7.9e-07 59.7 209 25.4
Cfa012635 Carpinus fangiana HOM05D006236 ORTHO05D003486 7.9e-07 59.7 111 27.0
Haze_03510 Corylus avellana HOM05D006236 ORTHO05D003486 1.0e-06 59.3 118 28.8
AL1G34710 Arabidopsis lyrata HOM05D012602 ORTHO05D003486 1.4e-06 58.9 122 28.7
Lj1g0007441 Lotus japonicus HOM05D006236 ORTHO05D003486 1.4e-06 58.9 434 23.7
SEGI_21165 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 1.4e-06 58.9 100 33.0
Zm00001eb385310 Zea mays HOM05D006236 ORTHO05D003486 1.8e-06 58.5 121 33.1
Gohir.A02G070600 Gossypium hirsutum HOM05D006236 ORTHO05D003486 2.3e-06 58.2 356 22.8
CARHR021930 Cardamine hirsuta HOM05D012602 ORTHO05D003486 3.0e-06 57.8 123 28.5
RcHm_v2.0_Chr6g0296791 Rosa chinensis HOM05D006236 ORTHO05D003486 3.0e-06 57.8 190 24.2
Psat5g058120 Pisum sativum HOM05D006236 ORTHO05D003486 3.9e-06 57.4 119 30.3
MELO3C012710.2 Cucumis melo HOM05D006236 ORTHO05D003486 5.1e-06 57.0 390 24.9
Medtr3g097180 Medicago truncatula HOM05D006236 ORTHO05D003486 5.1e-06 57.0 88 35.2


User provided reference genes

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