Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3022 Papaver somniferum HOM05D001789 ORTHO05D001755 2.5e-90 335.5 175 100.0
PSO675G7970 Papaver somniferum HOM05D001789 ORTHO05D001755 1.9e-74 282.7 183 84.2
PSO675G2961 Papaver somniferum HOM05D001789 ORTHO05D001755 1.0e-56 223.8 183 66.1
PSO017G4288 Papaver somniferum HOM05D001789 ORTHO05D001755 2.2e-51 206.1 183 62.3
PSO017G2415 Papaver somniferum HOM05D001789 ORTHO05D001755 1.4e-48 196.8 181 60.2
PSO478G3814 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-48 196.4 183 56.3
PSO017G2708 Papaver somniferum HOM05D001789 ORTHO05D001755 6.8e-48 194.5 181 59.7
PSO675G3161 Papaver somniferum HOM05D001789 ORTHO05D001755 1.7e-46 189.9 171 59.6
PSO017G0041 Papaver somniferum HOM05D001789 ORTHO05D001755 5.9e-44 181.4 183 57.9
PSO675G6771 Papaver somniferum HOM05D001789 ORTHO05D001755 5.0e-43 178.3 164 61.6
PSO017G4312 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-43 177.9 183 50.8
PSO478G4963 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-42 176.8 181 56.4
PSO675G2171 Papaver somniferum HOM05D001789 ORTHO05D001755 2.5e-42 176.0 172 55.2
PSO675G2205 Papaver somniferum HOM05D001789 ORTHO05D001755 2.0e-39 166.4 171 53.8
PSO675G9018 Papaver somniferum HOM05D001789 ORTHO05D001755 4.9e-38 161.8 183 51.9
PSO675G4438 Papaver somniferum HOM05D001789 ORTHO05D001755 3.2e-37 159.1 158 55.1
PSO478G0068 Papaver somniferum HOM05D001789 ORTHO05D001755 2.8e-33 146.0 183 50.8
PSO675G1802 Papaver somniferum HOM05D001789 ORTHO05D001755 3.1e-32 142.5 180 50.0
PSO461G0078 Papaver somniferum HOM05D001789 ORTHO05D001755 4.4e-31 138.7 182 50.0
PSO782G4460 Papaver somniferum HOM05D001789 ORTHO05D001755 1.4e-29 133.7 183 43.7
PSO384G2589 Papaver somniferum HOM05D001789 ORTHO05D001755 3.2e-29 132.5 184 47.8
PSO782G4634 Papaver somniferum HOM05D001789 ORTHO05D001755 9.2e-29 131.0 184 42.9
PSO170G3794 Papaver somniferum HOM05D001789 ORTHO05D001755 2.7e-28 129.4 184 48.4
PSO339G0965 Papaver somniferum HOM05D001789 ORTHO05D001755 4.6e-28 128.6 184 47.8
PSO210G6779 Papaver somniferum HOM05D001789 ORTHO05D001755 1.7e-27 126.7 183 47.5
Cc01_g18750 Coffea canephora HOM05D001789 ORTHO05D001755 3.9e-27 125.6 183 42.6
Dinv34576 Davidia involucrata HOM05D001789 ORTHO05D010416 8.6e-27 124.4 205 41.0
EL10Ac5g10456 Beta vulgaris HOM05D001789 ORTHO05D001755 1.6e-25 120.2 183 38.3
PSO081G0105 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-25 119.8 178 44.9
PSO017G4575 Papaver somniferum HOM05D001789 ORTHO05D001755 6.2e-25 118.2 168 42.3
PSO017G5894 Papaver somniferum HOM05D001789 ORTHO05D001755 3.1e-24 115.9 168 40.5
PSO478G3394 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-23 113.6 107 59.8
Aqoxy2G03555 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 2.6e-23 112.8 179 39.7
PSO384G2359 Papaver somniferum HOM05D001789 ORTHO05D001755 2.6e-23 112.8 180 39.4
PSO339G6309 Papaver somniferum HOM05D001789 ORTHO05D001755 2.9e-22 109.4 170 38.8
PSO832G3911 Papaver somniferum HOM05D001789 ORTHO05D001755 2.9e-22 109.4 171 39.2
PSO675G7026 Papaver somniferum HOM05D001789 ORTHO05D001755 1.4e-21 107.1 74 66.2
PSO675G3889 Papaver somniferum HOM05D001789 ORTHO05D001755 7.1e-21 104.8 203 35.5
Aqoxy5G00332 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.6e-20 103.6 181 36.5
PSO478G4273 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-20 103.2 190 35.3
PSO063G3347 Papaver somniferum HOM05D001789 ORTHO05D001755 7.8e-20 101.3 135 45.2
PSO675G1691 Papaver somniferum HOM05D001789 ORTHO05D001755 1.3e-19 100.5 182 42.3
PSO421G0436 Papaver somniferum HOM05D001789 ORTHO05D001755 2.3e-19 99.8 210 33.8
PSO063G6555 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-19 98.2 173 39.9
PSO729G0190 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-19 98.2 214 34.1
Nn1g02591 Nelumbo nucifera HOM05D001789 ORTHO05D001755 8.6e-19 97.8 183 37.2
PSO170G2114 Papaver somniferum HOM05D001789 ORTHO05D001755 4.3e-18 95.5 99 51.5
Rhsim01G0268700 Rhododendron simsii HOM05D001789 ORTHO05D001755 4.3e-18 95.5 120 40.8
PSO170G3495 Papaver somniferum HOM05D001789 ORTHO05D001755 7.3e-18 94.7 210 33.3
COL.COLO4_03560 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.6e-17 93.6 177 37.3
PSO063G3205 Papaver somniferum HOM05D001789 ORTHO05D001755 2.8e-17 92.8 123 42.3
PSO729G0047 Papaver somniferum HOM05D001789 ORTHO05D001755 2.8e-17 92.8 123 43.1
Manes.05G085400 Manihot esculenta HOM05D001789 ORTHO05D001755 3.6e-17 92.4 172 36.6
Manes.05G085350 Manihot esculenta HOM05D001789 ORTHO05D001755 6.2e-17 91.7 172 36.0
Rhsim01G0268800 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.1e-16 90.9 123 39.8
vmacro14863 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.1e-16 90.9 210 31.0
PSO017G4820 Papaver somniferum HOM05D001789 ORTHO05D001755 1.4e-16 90.5 158 38.6
PSO782G1762 Papaver somniferum HOM05D001789 ORTHO05D001755 3.1e-16 89.4 113 53.1
PSO384G0184 Papaver somniferum HOM05D001789 ORTHO05D001755 6.8e-16 88.2 200 33.0
COL.COLO4_08283 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.5e-15 87.0 181 38.1
GSVIVG01036270001 Vitis vinifera HOM05D001789 ORTHO05D001755 1.5e-15 87.0 201 29.9
Cfa006403 Carpinus fangiana HOM05D001789 ORTHO05D001755 5.8e-15 85.1 177 31.1
Aqoxy5G00331 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 7.6e-15 84.7 176 38.6
PSO017G6319 Papaver somniferum HOM05D001789 ORTHO05D001755 2.2e-14 83.2 73 56.2
PSO210G2423 Papaver somniferum HOM05D001789 ORTHO05D001755 2.2e-14 83.2 124 37.9
Dinv20290 Davidia involucrata HOM05D001789 ORTHO05D001755 3.7e-14 82.4 203 28.1
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 6.4e-14 81.6 200 27.5
Lj2A1158T42 Lonicera japonica HOM05D001789 ORTHO05D001755 6.4e-14 81.6 202 30.2
Aqoxy2G03731 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 8.4e-14 81.3 123 39.0
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 1.1e-13 80.9 203 28.1
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.4e-13 80.5 97 42.3
Os12g0634900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.2e-13 79.3 180 32.8
Sabra05G0168200 Salix brachista HOM05D001789 ORTHO05D001755 5.4e-13 78.6 178 34.3
Gohir.A13G169500 Gossypium hirsutum HOM05D001789 ORTHO05D001755 7.1e-13 78.2 203 27.6
Nn1g02587 Nelumbo nucifera HOM05D001789 ORTHO05D001755 7.1e-13 78.2 203 27.6
TAR365G0302 Trochodendron aralioides HOM05D001789 ORTHO05D001755 7.1e-13 78.2 203 27.6
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 9.2e-13 77.8 205 25.9
ATR0665G154 Amborella trichopoda HOM05D001789 ORTHO05D001755 1.6e-12 77.0 207 28.0
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 2.1e-12 76.6 203 27.6
Duzib128G1133 Durio zibethinus HOM05D001789 ORTHO05D001755 3.5e-12 75.9 156 30.8
PSO675G2689 Papaver somniferum HOM05D001789 ORTHO05D001755 4.6e-12 75.5 61 72.1
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 6.0e-12 75.1 194 27.3
PSO384G4611 Papaver somniferum HOM05D001789 ORTHO05D001755 6.0e-12 75.1 119 45.4
unitig_37.g12638 Utricularia gibba HOM05D001789 ORTHO05D001755 6.0e-12 75.1 202 26.7
Eucgr.H04321 Eucalyptus grandis HOM05D001789 ORTHO05D001755 7.8e-12 74.7 204 27.0
Manes.05G085300 Manihot esculenta HOM05D001789 ORTHO05D001755 7.8e-12 74.7 166 31.9
COL.COLO4_15370 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.0e-11 74.3 203 26.6
Manes.09G151500 Manihot esculenta HOM05D001789 ORTHO05D001755 2.3e-11 73.2 190 26.8
SEGI_21200 Sequoiadendron giganteum HOM05D001789 ORTHO05D001755 2.3e-11 73.2 201 27.4
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 3.0e-11 72.8 202 26.7
Haze_04373 Corylus avellana HOM05D001789 ORTHO05D001755 3.0e-11 72.8 176 30.7
Os02g0492900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.9e-11 72.4 176 29.0
CSS0012748 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 5.1e-11 72.0 105 38.1
Rhsim01G0268600 Rhododendron simsii HOM05D001789 ORTHO05D001755 5.1e-11 72.0 140 32.9
Aqoxy4G01760 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 6.6e-11 71.6 100 47.0
PSO339G3442 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-11 71.6 119 43.7
Migut.D00382 Erythranthe guttata HOM05D001789 ORTHO05D001755 8.6e-11 71.2 186 32.3
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 8.6e-11 71.2 203 27.6
Migut.D00383 Erythranthe guttata HOM05D001789 ORTHO05D001755 1.1e-10 70.9 169 29.6
PSO591G0460 Papaver somniferum HOM05D001789 ORTHO05D001755 1.9e-10 70.1 118 35.6
Migut.D00384 Erythranthe guttata HOM05D001789 ORTHO05D001755 2.5e-10 69.7 186 32.8
BcaB04g19305 Brassica carinata HOM05D001789 ORTHO05D001755 5.6e-10 68.6 198 26.8
PSO675G1254 Papaver somniferum HOM05D001789 ORTHO05D001755 5.6e-10 68.6 77 48.1
Os02g0493300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 9.6e-10 67.8 184 29.9
PSO063G7083 Papaver somniferum HOM05D001789 ORTHO05D001755 9.6e-10 67.8 162 33.3
PSO782G0719 Papaver somniferum HOM05D001789 ORTHO05D001755 9.6e-10 67.8 143 31.5
Aqoxy2G03554 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.6e-09 67.0 206 29.1
Actinidia18365 Actinidia chinensis HOM05D001789 ORTHO05D001755 2.1e-09 66.6 187 28.9
CARHR078940 Cardamine hirsuta HOM05D001789 ORTHO05D001755 2.1e-09 66.6 197 24.9
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-09 66.6 140 31.4
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.8e-09 66.2 181 27.1
PSO339G0875 Papaver somniferum HOM05D001789 ORTHO05D001755 4.7e-09 65.5 82 41.5
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 4.7e-09 65.5 140 30.7
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 6.2e-09 65.1 199 26.6
Psat0s1144g0080 Pisum sativum HOM05D001789 ORTHO05D001755 6.2e-09 65.1 188 24.5
Aqoxy2G03556 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 8.1e-09 64.7 97 35.1
BcaC09g47780 Brassica carinata HOM05D001789 ORTHO05D001755 8.1e-09 64.7 199 27.6
A03p33800 Brassica napus HOM05D001789 ORTHO05D001755 8.1e-09 64.7 197 26.4
CiPaw.07G068600 Carya illinoinensis HOM05D001789 ORTHO05D001755 8.1e-09 64.7 203 26.6
Lsat_1_v5_gn_2_64421 Lactuca sativa HOM05D001789 ORTHO05D001755 8.1e-09 64.7 204 24.0
MD04G1226000 Malus domestica HOM05D001789 ORTHO05D001755 8.1e-09 64.7 187 25.1
AL3G14790 Arabidopsis lyrata HOM05D001789 ORTHO05D001755 1.1e-08 64.3 197 26.4
Os05g0103600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.1e-08 64.3 198 29.8
BcaB04g21349 Brassica carinata HOM05D001789 ORTHO05D001755 1.4e-08 63.9 197 25.9
COL.COLO4_05094 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.4e-08 63.9 202 32.7
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 1.8e-08 63.5 206 25.7
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 1.8e-08 63.5 207 23.7
SalBow6G4950 Salvia bowleyana HOM05D001789 ORTHO05D001755 1.8e-08 63.5 165 27.3
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus HOM05D001789 ORTHO05D001755 2.4e-08 63.2 198 26.8
C03p41100 Brassica napus HOM05D001789 ORTHO05D001755 3.1e-08 62.8 194 26.3
Ciclev10028402m.g Citrus clementina HOM05D001789 ORTHO05D001755 3.1e-08 62.8 202 28.2
Lju50C34T11 Lonicera japonica HOM05D001789 ORTHO05D001755 3.1e-08 62.8 201 27.9
Manes.08G136000 Manihot esculenta HOM05D001789 ORTHO05D001755 3.1e-08 62.8 190 27.4
Potri.005G219201 Populus trichocarpa HOM05D001789 ORTHO05D001755 3.1e-08 62.8 156 33.3
Zm00001eb405740 Zea mays HOM05D001789 ORTHO05D001755 3.1e-08 62.8 177 27.7
Prupe.6G344800 Prunus persica HOM05D001789 ORTHO05D001755 4.0e-08 62.4 190 28.9
Thhalv10020698m.g Eutrema salsugineum HOM05D001789 ORTHO05D001755 5.2e-08 62.0 199 26.6
PSO017G0677 Papaver somniferum HOM05D001789 ORTHO05D001755 6.8e-08 61.6 139 32.4
Os03g0680400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 8.9e-08 61.2 183 29.5
Os09g0124800 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 8.9e-08 61.2 118 32.2
Zm00001eb356200 Zea mays HOM05D001789 ORTHO05D001755 1.2e-07 60.8 197 28.9
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 2.0e-07 60.1 202 24.8
QL12p018052 Quercus lobata HOM05D001789 ORTHO05D001755 2.6e-07 59.7 165 27.9
Zm00001eb034120 Zea mays HOM05D001789 ORTHO05D001755 2.6e-07 59.7 181 30.4
AT3G04710 Arabidopsis thaliana HOM05D001789 ORTHO05D001755 3.4e-07 59.3 197 25.9
Carub.0003s0386 Capsella rubella HOM05D001789 ORTHO05D001755 3.4e-07 59.3 197 24.9
PSO675G8957 Papaver somniferum HOM05D001789 ORTHO05D001755 4.4e-07 58.9 43 62.8
Phvul.006G102400 Phaseolus vulgaris HOM05D001789 ORTHO05D001755 4.4e-07 58.9 142 25.4
Sp3g03550 Schrenkiella parvula HOM05D001789 ORTHO05D001755 4.4e-07 58.9 199 25.1
Os12g0600100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 7.6e-07 58.2 119 27.7
Os12g0599900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.7e-06 57.0 182 28.6
TWI56G1124 Tripterygium wilfordii HOM05D001789 ORTHO05D001755 1.7e-06 57.0 146 26.0
SalBow4G2090 Salvia bowleyana HOM05D001789 ORTHO05D001755 2.2e-06 56.6 181 28.7
EL10Ac4g09088 Beta vulgaris HOM05D001789 ORTHO05D001755 2.9e-06 56.2 144 27.1
CANSAT54G0997 Cannabis sativa HOM05D001789 ORTHO05D001755 3.8e-06 55.8 201 27.4
PGR004G2017 Punica granatum HOM05D001789 ORTHO05D001755 3.8e-06 55.8 203 25.6
Sabra05G0047600 Salix brachista HOM05D001789 ORTHO05D001755 3.8e-06 55.8 189 26.5
Zm00001eb031110 Zea mays HOM05D001789 ORTHO05D001755 3.8e-06 55.8 179 28.5
Aa31LG5G15100 Aethionema arabicum HOM05D001789 ORTHO05D001755 4.9e-06 55.5 197 25.9
Migut.B01098 Erythranthe guttata HOM05D001789 ORTHO05D001755 4.9e-06 55.5 116 27.6
MELO3C004392.2 Cucumis melo HOM05D001789 ORTHO05D001755 6.4e-06 55.1 201 27.4
Os03g0680200 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 6.4e-06 55.1 173 29.5
CsaV3_2G003990 Cucumis sativus L. HOM05D001789 ORTHO05D001755 8.4e-06 54.7 201 25.9
HPP92_009631 Vanilla planifolia HOM05D001789 ORTHO05D001755 8.4e-06 54.7 139 25.2


User provided reference genes

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