Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 9.1e-159 563.5 287 100.0
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 5.0e-157 557.8 288 99.3
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 2.0e-105 386.3 286 70.3
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.1e-103 380.6 229 79.5
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 5.4e-103 378.3 287 68.3
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 9.2e-103 377.5 286 69.2
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.2e-102 377.1 247 74.5
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.6e-102 376.7 230 77.0
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 2.7e-102 375.9 295 68.5
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.5e-102 375.6 231 78.4
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.3e-101 373.6 247 74.5
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.7e-101 373.2 286 67.8
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.0e-101 372.5 227 78.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 3.9e-101 372.1 247 74.5
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 8.7e-101 370.9 280 66.8
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.1e-100 370.5 284 67.3
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.1e-100 370.5 284 67.3
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.5e-100 370.2 283 67.8
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.9e-100 369.8 288 67.4
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.3e-100 368.6 233 76.8
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 9.6e-100 367.5 256 71.1
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 9.6e-100 367.5 233 75.5
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.2e-99 367.1 233 76.4
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 2.8e-99 365.9 302 64.2
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 8.1e-99 364.4 283 66.8
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 8.1e-99 364.4 287 66.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.1e-98 364.0 286 64.3
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.4e-98 362.8 227 77.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 2.4e-98 362.8 227 75.8
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 4.0e-98 362.1 283 66.8
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 5.3e-98 361.7 293 65.2
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 9.0e-98 360.9 266 68.8
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 9.0e-98 360.9 280 65.4
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 9.0e-98 360.9 263 71.1
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.2e-97 360.5 229 75.1
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.5e-97 360.1 285 66.0
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.0e-97 359.8 310 62.6
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.6e-97 359.4 288 64.2
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.6e-97 359.4 288 64.2
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.4e-97 359.0 230 74.3
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 4.4e-97 358.6 290 64.5
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 4.4e-97 358.6 254 70.1
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 5.8e-97 358.2 288 66.7
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.3e-96 357.1 286 64.3
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.3e-96 357.1 292 64.4
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.7e-96 356.7 227 76.2
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.7e-96 356.7 230 75.2
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 2.2e-96 356.3 229 76.4
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.9e-96 355.9 249 71.1
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 3.8e-96 355.5 226 74.3
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 3.8e-96 355.5 248 71.4
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 3.8e-96 355.5 289 65.1
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 3.8e-96 355.5 226 74.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 8.4e-96 354.4 227 76.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.1e-95 354.0 258 69.0
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.1e-95 354.0 247 71.3
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.9e-95 353.2 228 75.0
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.4e-95 352.8 281 63.7
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.2e-95 352.4 292 63.7
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 5.4e-95 351.7 237 73.4
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 7.1e-95 351.3 286 61.9
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.3e-95 350.9 265 67.2
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 9.3e-95 350.9 268 67.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 1.6e-94 350.1 228 74.1
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 2.1e-94 349.7 280 63.2
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 2.7e-94 349.4 230 73.9
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.5e-94 349.0 229 74.7
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 4.6e-94 348.6 227 76.2
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 4.6e-94 348.6 227 75.3
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.6e-94 348.6 285 66.0
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 4.6e-94 348.6 263 68.8
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 6.0e-94 348.2 284 63.7
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 6.0e-94 348.2 249 68.3
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.0e-93 347.4 228 74.6
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.3e-93 347.1 323 58.5
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 6.6e-93 344.7 226 74.8
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 8.7e-93 344.4 248 69.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.1e-92 344.0 222 75.7
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.1e-92 344.0 227 74.0
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 2.5e-92 342.8 227 73.6
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-91 340.5 267 66.7
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-91 340.5 263 68.4
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-91 340.5 263 68.4
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.3e-91 340.5 233 71.2
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.6e-91 340.1 263 68.4
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.8e-91 339.3 286 60.8
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 3.6e-91 339.0 230 72.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 6.2e-91 338.2 230 71.3
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 3.1e-90 335.9 229 72.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.2e-89 334.0 283 61.8
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.2e-89 334.0 230 72.2
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 9.9e-89 330.9 205 77.6
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 9.9e-89 330.9 292 60.3
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.3e-88 330.5 227 69.2
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.6e-86 323.6 339 53.7
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 7.9e-86 321.2 368 50.5
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.9e-84 316.6 209 74.6
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 7.4e-84 314.7 239 64.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 4.3e-76 288.9 226 63.7
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.1e-74 284.3 242 62.8
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.0e-73 280.0 212 68.4
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.3e-72 277.3 242 55.8
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.1e-70 270.0 216 62.0
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 7.4e-68 261.5 202 60.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.4e-66 256.5 200 66.5
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.2e-63 245.0 223 61.0
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 4.6e-62 242.3 209 56.9
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 8.8e-61 238.0 215 60.0
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.8e-40 169.5 266 42.1
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 7.0e-34 148.7 172 50.6
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.1e-31 141.4 297 35.4
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.9e-31 140.6 193 44.0
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.0e-29 133.3 91 73.6
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.2e-28 131.3 181 38.7
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.2e-27 127.1 89 73.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.7e-25 120.2 87 69.0
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 2.9e-24 116.7 130 45.4
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 5.0e-08 62.8 104 41.3
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 3.6e-06 56.6 80 40.0


User provided reference genes

Program Settings