Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 7.1e-96 354.0 186 100.0
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.4e-88 328.9 187 94.7
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 7.4e-45 184.5 195 54.4
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 6.3e-44 181.4 195 53.3
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.3e-43 178.3 129 73.6
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.6e-42 176.8 211 53.1
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 8.5e-41 171.0 190 52.1
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 7.2e-40 167.9 161 55.9
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 1.6e-39 166.8 193 50.3
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.1e-39 166.4 201 50.7
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 4.7e-39 165.2 161 55.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 4.7e-39 165.2 164 52.4
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 4.7e-39 165.2 196 50.0
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 8.0e-39 164.5 188 50.0
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.0e-38 162.2 198 49.0
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 6.7e-38 161.4 205 48.3
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 8.8e-38 161.0 199 52.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 8.8e-38 161.0 199 52.8
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 8.8e-38 161.0 194 50.5
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.2e-37 160.6 172 53.5
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.5e-37 160.2 161 57.1
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 2.0e-37 159.8 198 50.5
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.6e-37 159.5 173 50.9
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.6e-37 159.5 159 54.1
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 3.3e-37 159.1 185 48.1
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 3.3e-37 159.1 192 45.3
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.4e-37 158.7 165 54.5
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 5.7e-37 158.3 121 63.6
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 7.5e-37 157.9 168 52.4
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 7.5e-37 157.9 159 54.1
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 7.5e-37 157.9 165 54.5
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 9.7e-37 157.5 165 54.5
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.7e-36 156.8 127 61.4
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.2e-36 156.4 182 49.5
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 2.2e-36 156.4 148 56.1
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.8e-36 156.0 111 67.6
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.8e-36 156.0 168 54.2
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 3.7e-36 155.6 187 49.2
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 4.8e-36 155.2 163 55.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.8e-36 155.2 196 45.4
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 8.3e-36 154.5 193 49.2
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 8.3e-36 154.5 186 48.9
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 8.3e-36 154.5 199 47.7
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.4e-35 153.7 158 51.9
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.4e-35 152.9 113 65.5
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.4e-35 152.9 149 53.7
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 3.1e-35 152.5 160 50.6
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.0e-35 151.4 94 78.7
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 9.1e-35 151.0 177 48.0
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 9.1e-35 151.0 191 47.1
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.6e-34 150.2 109 67.9
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 2.0e-34 149.8 201 45.8
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.7e-34 149.4 194 47.9
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 4.5e-34 148.7 188 48.9
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.0e-33 147.5 101 70.3
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.0e-33 147.5 206 46.6
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.3e-33 147.1 190 46.8
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.9e-33 146.0 194 44.8
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.9e-33 146.0 194 44.8
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.9e-33 146.0 115 65.2
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.8e-33 145.6 114 64.9
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.5e-32 143.7 175 50.9
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.5e-32 143.7 182 44.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.9e-32 143.3 155 51.0
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 2.5e-32 142.9 108 64.8
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 3.2e-32 142.5 193 45.6
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 4.2e-32 142.1 176 49.4
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 4.2e-32 142.1 185 45.4
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 5.5e-32 141.7 108 64.8
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 5.5e-32 141.7 97 69.1
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 7.2e-32 141.4 108 63.0
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.2e-31 140.6 113 60.2
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.6e-31 140.2 108 63.9
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.6e-31 140.2 108 63.9
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.6e-31 140.2 180 46.7
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.1e-31 139.8 113 65.5
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.7e-31 139.4 187 47.1
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 3.6e-31 139.0 190 44.7
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.6e-31 139.0 191 44.5
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 3.6e-31 139.0 106 68.9
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 4.7e-31 138.7 186 42.5
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 4.7e-31 138.7 186 42.5
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.6e-29 132.9 95 67.4
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 4.4e-29 132.1 204 43.1
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 7.5e-29 131.3 102 63.7
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 9.8e-29 131.0 102 63.7
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.7e-28 130.2 192 41.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.7e-28 130.2 166 47.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.2e-28 129.8 96 65.6
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.8e-27 126.7 181 43.1
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.8e-27 126.7 170 48.2
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 3.8e-25 119.0 173 42.2
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 7.2e-24 114.8 72 76.4
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 4.7e-23 112.1 107 55.1
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.4e-22 110.5 83 65.1
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 4.0e-22 109.0 110 50.0
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.2e-21 107.5 94 58.5
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 4.4e-21 105.5 84 53.6
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 4.9e-20 102.1 88 56.8
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 8.3e-20 101.3 126 45.2
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 5.9e-18 95.1 201 38.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 5.9e-18 95.1 93 47.3
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-16 90.5 90 50.0
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 4.3e-16 89.0 61 63.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.9e-08 63.5 43 60.5
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 2.5e-08 63.2 96 41.7
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.6e-07 60.5 44 63.6


User provided reference genes

Program Settings