Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2572 Papaver somniferum HOM05D008691 ORTHO05D005947 4.2e-261 904.0 426 100.0
PSO170G2084 Papaver somniferum HOM05D008691 ORTHO05D005947 1.8e-240 835.5 426 93.2
PSO063G7584 Papaver somniferum HOM05D008691 ORTHO05D005947 1.2e-231 806.2 427 90.6
PSO407G0400 Papaver somniferum HOM05D008691 ORTHO05D005947 6.4e-225 783.9 427 89.2
PSO407G0264 Papaver somniferum HOM05D008691 ORTHO05D005947 2.0e-223 778.9 427 88.5
PSO407G0177 Papaver somniferum HOM05D008691 ORTHO05D005947 6.0e-223 777.3 427 88.5
PSO407G0147 Papaver somniferum HOM05D008691 ORTHO05D005947 7.8e-223 776.9 427 88.5
PSO407G0139 Papaver somniferum HOM05D008691 ORTHO05D005947 1.0e-222 776.5 427 88.3
PSO407G0054 Papaver somniferum HOM05D008691 ORTHO05D005947 4.3e-221 771.2 427 87.8
PSO170G2117 Papaver somniferum HOM05D008691 ORTHO05D005947 7.3e-221 770.4 427 87.6
PSO407G0090 Papaver somniferum HOM05D008691 ORTHO05D005947 1.3e-137 493.8 249 92.8
PSO170G3231 Papaver somniferum HOM05D008691 ORTHO05D005947 5.4e-99 365.5 497 46.7
PSO170G5296 Papaver somniferum HOM05D008691 ORTHO05D005947 6.0e-98 362.1 497 46.1
PSO017G7158 Papaver somniferum HOM05D008691 ORTHO05D005947 1.2e-77 294.7 394 48.5
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 6.2e-55 219.2 416 38.7
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 1.9e-51 207.6 390 34.6
PSO478G1223 Papaver somniferum HOM05D008691 ORTHO05D005947 2.5e-48 197.2 395 35.7
PSO017G0318 Papaver somniferum HOM05D008691 ORTHO05D005947 6.9e-46 189.1 234 48.7
PSO782G1951 Papaver somniferum HOM05D008691 ORTHO05D005947 6.9e-46 189.1 455 32.5
PSO384G1299 Papaver somniferum HOM05D008691 ORTHO05D005947 8.5e-44 182.2 335 35.5
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.1e-40 171.8 354 34.5
PSO339G4378 Papaver somniferum HOM05D008691 ORTHO05D005947 9.7e-40 168.7 340 35.6
PSO357G0015 Papaver somniferum HOM05D008691 ORTHO05D005947 1.1e-35 155.2 310 36.8
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.0e-33 148.7 377 30.0
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.8e-33 147.9 439 29.4
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-32 144.1 300 31.3
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 7.4e-32 142.5 411 30.4
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.0e-29 134.4 331 31.7
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-29 134.0 474 28.1
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.8e-28 130.2 287 32.8
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.5e-28 129.4 346 30.9
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.7e-26 124.0 400 26.0
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.6e-26 123.6 396 30.1
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.8e-25 121.3 331 29.9
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.3e-25 120.9 316 32.9
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.2e-25 119.8 408 25.7
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 6.7e-25 119.4 355 28.5
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.8e-25 119.0 391 28.9
Aqoxy7G01104 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-24 117.5 421 27.3
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.3e-23 115.2 393 29.3
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.2e-21 108.6 407 25.8
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.6e-21 107.5 299 28.4
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.0e-20 103.2 327 27.5
Aqoxy2G03979 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.5e-19 99.8 267 31.5
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 7.2e-19 99.4 366 24.3
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-17 95.5 401 24.7
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 1.5e-16 91.7 250 28.4
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 4.4e-16 90.1 392 24.2
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.7e-16 89.7 259 25.1
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 9.8e-16 89.0 448 23.7
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 8.3e-15 85.9 207 27.5
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.4e-14 85.1 328 24.1
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.1e-14 84.0 258 24.4
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-14 83.6 407 23.6
Aqoxy2G02111 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.9e-13 79.7 108 40.7
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-12 78.2 376 26.6
Cpa.g.sc12.213 Carica papaya HOM05D000007 ORTHO05D000521 2.2e-12 77.8 449 23.6
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 8.5e-12 75.9 317 27.4
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.5e-11 75.1 307 24.8
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 1.5e-11 75.1 364 25.0
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.9e-11 74.7 414 22.9
Aqoxy5G00679 Aquilegia oxysepala HOM05D000171 ORTHO05D000101 3.2e-11 73.9 371 26.4
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.5e-11 73.2 433 21.2
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 7.2e-11 72.8 248 25.4
PGSC0003DMG400029657 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.2e-10 72.0 391 25.6
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 2.7e-10 70.9 257 27.2
DCAR_021098 Daucus carota HOM05D000007 ORTHO05D000521 2.7e-10 70.9 314 23.6
Migut.C01211 Erythranthe guttata HOM05D000007 ORTHO05D000521 2.7e-10 70.9 408 24.5
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 2.7e-10 70.9 269 24.9
Cc06_g22260 Coffea canephora HOM05D000007 ORTHO05D000521 3.6e-10 70.5 335 25.4
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 8.0e-10 69.3 251 27.5
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 8.0e-10 69.3 321 24.6
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 1.0e-09 68.9 319 24.1
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 1.8e-09 68.2 394 22.3
Manes.06G082000 Manihot esculenta HOM05D000007 ORTHO05D007631 2.3e-09 67.8 306 26.5
PSO210G7474 Papaver somniferum HOM05D000007 ORTHO05D000017 2.3e-09 67.8 404 25.2
Duzib128G1891 Durio zibethinus HOM05D000007 ORTHO05D001644 4.0e-09 67.0 374 23.5
Glyma.06G197100 Glycine max HOM05D000007 ORTHO05D000017 6.8e-09 66.2 216 28.2
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 6.8e-09 66.2 322 24.5
CSS0009149 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 8.8e-09 65.9 357 23.8
Medtr3g006570 Medicago truncatula HOM05D000007 ORTHO05D000017 8.8e-09 65.9 392 24.2
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-08 65.5 294 23.5
Nitab4.5_0011068g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.5e-08 65.1 286 25.2
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 1.5e-08 65.1 312 25.0
FAN13G2729 Fragaria x ananassa HOM05D000007 ORTHO05D022567 2.0e-08 64.7 268 23.1
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 2.0e-08 64.7 107 29.0
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 2.0e-08 64.7 403 22.6
FAN18G2217 Fragaria x ananassa HOM05D000007 ORTHO05D022567 3.4e-08 63.9 343 22.2
SGA_v2.0_scaffold13G06731 Striga asiatica HOM05D000007 ORTHO05D007252 4.4e-08 63.5 322 25.5
TAR381G1454 Trochodendron aralioides HOM05D000007 ORTHO05D000521 4.4e-08 63.5 323 25.1
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 5.7e-08 63.2 312 24.0
Aqoxy7G01381 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 7.5e-08 62.8 138 35.5
MSTRG.7163 Avicennia marina HOM05D000007 ORTHO05D000017 7.5e-08 62.8 332 26.2
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 7.5e-08 62.8 337 23.7
Hma1.2p1_0106F.1_g050940 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.3e-07 62.0 446 23.1
Nitab4.5_0003611g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.3e-07 62.0 288 24.7
PGSC0003DMG400037423 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.3e-07 62.0 406 25.6
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 1.7e-07 61.6 347 25.9
Rhsim06G0172600 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.7e-07 61.6 344 24.4
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 2.2e-07 61.2 418 24.4
Dinv38200 Davidia involucrata HOM05D000007 ORTHO05D000017 2.8e-07 60.8 218 26.6
arahy.Tifrunner.gnm1.ann1.59LQY5 Arachis hypogaea HOM05D000007 ORTHO05D000017 3.7e-07 60.5 303 26.4
ClCG01G010140 Citrullus lanatus HOM05D000007 ORTHO05D000017 3.7e-07 60.5 254 22.8
Migut.N00599 Erythranthe guttata HOM05D000007 ORTHO05D005385 4.9e-07 60.1 400 23.8
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.9e-07 60.1 395 22.3
CSS0004500 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 6.3e-07 59.7 282 24.1
Migut.N00587 Erythranthe guttata HOM05D000007 ORTHO05D005385 6.3e-07 59.7 384 24.5
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 6.3e-07 59.7 333 22.8
Dinv29686 Davidia involucrata HOM05D000007 ORTHO05D000521 8.3e-07 59.3 273 24.9
Medtr0044s0300 Medicago truncatula HOM05D000007 ORTHO05D000017 8.3e-07 59.3 393 24.2
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 8.3e-07 59.3 272 24.6
TAR365G1056 Trochodendron aralioides HOM05D000007 ORTHO05D000521 8.3e-07 59.3 343 24.2
HanXRQChr03g0074871 Helianthus annuus HOM05D000007 ORTHO05D000521 1.1e-06 58.9 310 24.8
QL01p045544 Quercus lobata HOM05D000007 ORTHO05D000521 1.1e-06 58.9 376 25.3
Solyc09g083230.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.1e-06 58.9 329 23.1
Actinidia35876 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.4e-06 58.5 246 24.0
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.4e-06 58.5 263 23.2
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.4e-06 58.5 248 24.2
QL12p002576 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-06 58.5 335 22.7
Actinidia12094 Actinidia chinensis HOM05D000007 ORTHO05D000521 1.8e-06 58.2 290 24.1
Medtr5g046290 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 58.2 245 25.7
Medtr5g046300 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 58.2 245 25.7
TAR624G0325 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.8e-06 58.2 248 27.0
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.4e-06 57.8 229 27.1
CDE05G3368 Ceratophyllum demersum HOM05D000007 ORTHO05D000017 2.4e-06 57.8 194 28.4
Ciclev10028647m.g Citrus clementina HOM05D000007 ORTHO05D000039 2.4e-06 57.8 358 25.1
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 2.4e-06 57.8 326 25.5
Hma1.2p1_0157F.1_g069160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 3.1e-06 57.4 267 26.2
Hma1.2p1_0157F.1_g069186 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 3.1e-06 57.4 267 26.2
Medtr4g023090 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 57.4 235 29.8
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.1e-06 57.4 181 28.2
Medtr6g065980 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 57.0 248 25.0
Lj1C671T7 Lonicera japonica HOM05D000007 ORTHO05D000039 5.4e-06 56.6 276 22.8
Medtr3g030350 Medicago truncatula HOM05D000007 ORTHO05D000017 5.4e-06 56.6 254 24.0
TWI38G1608 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 5.4e-06 56.6 314 22.9
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 7.0e-06 56.2 240 23.3
Medtr3g083640 Medicago truncatula HOM05D000007 ORTHO05D000017 9.1e-06 55.8 390 22.1
QL04p067556 Quercus lobata HOM05D000007 ORTHO05D000039 9.1e-06 55.8 322 23.3


User provided reference genes

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