Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 2.1e-178 629.0 337 100.0
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 9.7e-160 567.0 345 90.4
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 1.1e-27 128.3 356 35.7
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.5e-27 127.9 358 36.3
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.0e-27 127.5 361 36.6
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 3.3e-27 126.7 342 36.5
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.7e-26 124.4 359 36.8
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 3.1e-25 120.2 354 35.9
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 5.3e-25 119.4 351 35.9
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 2.0e-24 117.5 359 35.9
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 2.0e-24 117.5 356 36.2
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 1.0e-23 115.2 345 34.8
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 3.2e-22 110.2 359 35.4
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 9.4e-22 108.6 293 33.1
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 3.6e-21 106.7 265 34.3
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 6.1e-21 105.9 362 34.0
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.0e-20 105.1 352 33.5
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 1.8e-20 104.4 354 29.4
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.8e-20 104.4 344 30.5
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 2.3e-20 104.0 366 35.5
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 3.0e-20 103.6 382 32.2
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 4.0e-20 103.2 349 32.4
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 5.2e-20 102.8 287 32.1
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 9.7e-19 98.6 354 33.3
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 9.7e-19 98.6 345 29.3
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 2.8e-18 97.1 234 32.9
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 6.3e-18 95.9 400 32.5
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 8.2e-18 95.5 349 31.5
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 1.4e-17 94.7 348 34.2
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 7.0e-17 92.4 347 32.0
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 9.1e-17 92.0 367 31.9
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 1.2e-16 91.7 246 31.7
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 1.6e-16 91.3 360 30.8
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 4.5e-16 89.7 384 32.0
AL2G35870 Arabidopsis lyrata HOM05D008819 ORTHO05D003197 5.9e-16 89.4 273 29.7
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 7.7e-16 89.0 350 32.3
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 1.0e-15 88.6 254 35.0
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 3.8e-15 86.7 354 31.9
AT1G75860 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 5.0e-15 86.3 249 29.3
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 5.0e-15 86.3 351 31.9
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 5.0e-15 86.3 258 31.4
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 6.5e-15 85.9 355 31.8
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 6.5e-15 85.9 406 31.8
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.5e-14 84.7 316 28.5
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 2.5e-14 84.0 352 32.4
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 3.2e-14 83.6 363 30.0
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 3.2e-14 83.6 358 31.8
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 4.2e-14 83.2 384 31.8
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 9.4e-14 82.0 348 31.9
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 9.4e-14 82.0 247 32.4
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 1.2e-13 81.6 243 31.3
Carub.0002s2277 Capsella rubella HOM05D008819 ORTHO05D003197 1.6e-13 81.3 248 29.4
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.6e-13 81.3 354 31.4
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 2.7e-13 80.5 341 33.7
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.7e-13 79.7 237 32.1
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 4.7e-13 79.7 351 28.2
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 6.1e-13 79.3 362 32.3
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 6.1e-13 79.3 251 30.3
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.4e-12 78.2 362 30.7
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 2.3e-12 77.4 315 30.5
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 2.3e-12 77.4 356 32.9
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 6.8e-12 75.9 367 26.4
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 6.8e-12 75.9 358 32.1
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 6.8e-12 75.9 357 26.1
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 6.8e-12 75.9 368 30.7
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 8.8e-12 75.5 287 28.6
FvH4_2g38160 Fragaria vesca HOM05D004095 ORTHO05D003197 8.8e-12 75.5 236 32.2
A07p41430 Brassica napus HOM05D008819 ORTHO05D003197 1.5e-11 74.7 248 32.3
Sp5g31000 Schrenkiella parvula HOM05D008819 ORTHO05D003197 1.5e-11 74.7 262 27.5
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 1.5e-11 74.7 364 30.8
FAN27G1813 Fragaria x ananassa HOM05D004095 ORTHO05D003197 3.4e-11 73.6 233 30.9
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.4e-11 73.6 272 27.6
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 7.5e-11 72.4 252 29.8
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 9.8e-11 72.0 355 29.9
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 1.3e-10 71.6 296 26.7
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 1.7e-10 71.2 342 32.7
THA.LOC104809551 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 1.7e-10 71.2 266 30.5
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 2.2e-10 70.9 243 30.0
BcaC08g47318 Brassica carinata HOM05D008819 ORTHO05D003197 2.8e-10 70.5 248 29.4
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 2.8e-10 70.5 385 31.7
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.8e-10 70.5 235 27.7
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 3.7e-10 70.1 346 31.5
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.7e-10 70.1 235 27.7
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 3.7e-10 70.1 344 29.4
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 4.8e-10 69.7 343 28.0
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 6.3e-10 69.3 351 32.5
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 8.3e-10 68.9 351 30.5
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 1.1e-09 68.6 395 27.3
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.1e-09 68.6 235 26.8
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 1.1e-09 68.6 351 30.5
Thhalv10019693m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 1.4e-09 68.2 278 29.1
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 1.4e-09 68.2 264 29.9
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 1.4e-09 68.2 169 41.4
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.8e-09 67.8 324 32.1
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 1.8e-09 67.8 422 27.3
C06p49830 Brassica napus HOM05D008819 ORTHO05D003197 3.1e-09 67.0 248 29.0
BolC6t40021H Brassica oleracea HOM05D008819 ORTHO05D003197 3.1e-09 67.0 248 29.0
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 3.1e-09 67.0 242 28.5
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 4.1e-09 66.6 342 31.6
Aa31LG4G6060 Aethionema arabicum HOM05D008819 ORTHO05D003197 5.4e-09 66.2 259 29.3
A03p63990 Brassica napus HOM05D004095 ORTHO05D003197 5.4e-09 66.2 383 28.5
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 7.0e-09 65.9 359 28.1
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 1.2e-08 65.1 345 32.2
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 1.2e-08 65.1 250 28.8
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 1.6e-08 64.7 311 24.8
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 2.0e-08 64.3 296 27.4
RcHm_v2.0_Chr6g0303321 Rosa chinensis HOM05D004095 ORTHO05D003197 2.0e-08 64.3 235 27.7
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 3.5e-08 63.5 316 24.1
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 4.5e-08 63.2 350 24.3
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 4.5e-08 63.2 370 27.8
HPP92_007327 Vanilla planifolia HOM05D004095 ORTHO05D003197 4.5e-08 63.2 365 25.8
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 5.9e-08 62.8 196 39.8
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 5.9e-08 62.8 88 39.8
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 7.7e-08 62.4 323 27.2
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.0e-07 62.0 241 36.9
GSVIVG01024025001 Vitis vinifera HOM05D004095 ORTHO05D003197 1.3e-07 61.6 257 26.8
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 1.7e-07 61.2 239 28.9
BraA03t15466Z Brassica rapa HOM05D004095 ORTHO05D003197 1.7e-07 61.2 390 28.2
Actinidia03180 Actinidia chinensis HOM05D004095 ORTHO05D003197 6.5e-07 59.3 247 28.3
Sp7g33720 Schrenkiella parvula HOM05D004095 ORTHO05D003197 8.5e-07 58.9 88 36.4
Lj1g0024400 Lotus japonicus HOM05D004095 ORTHO05D003197 1.1e-06 58.5 89 37.1
SHI08550 Sapria himalayana HOM05D003189 ORTHO05D003449 1.1e-06 58.5 275 27.6
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.5e-06 58.2 354 25.1
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 1.5e-06 58.2 109 36.7
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 1.9e-06 57.8 139 32.4
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 1.9e-06 57.8 373 24.9
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 2.5e-06 57.4 227 30.0
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.2e-06 57.0 343 25.1
MD02G1126500 Malus domestica HOM05D004095 ORTHO05D003197 3.2e-06 57.0 101 39.6
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 4.2e-06 56.6 356 29.8
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 4.2e-06 56.6 150 45.3
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 4.2e-06 56.6 351 29.3
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 5.5e-06 56.2 126 29.4
Potri.005G242300 Populus trichocarpa HOM05D004095 ORTHO05D003197 5.5e-06 56.2 339 26.8
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 7.2e-06 55.8 354 27.4
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.2e-06 55.8 126 30.2


User provided reference genes

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