Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 4.0e-167 591.7 365 100.0
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.2e-136 490.3 365 72.3
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.7e-98 361.3 352 56.2
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.9e-92 343.6 353 53.0
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 5.5e-92 342.0 345 62.6
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 9.3e-92 341.3 357 57.4
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 3.5e-91 339.3 346 60.1
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 5.7e-89 332.0 351 56.1
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 9.7e-89 331.3 348 56.6
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.4e-87 327.4 357 57.1
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.8e-87 327.0 354 60.2
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 5.3e-87 325.5 352 59.7
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 2.2e-85 320.1 347 59.1
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 3.8e-85 319.3 351 55.0
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 8.5e-85 318.2 333 57.1
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 1.1e-84 317.8 352 55.7
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 1.1e-84 317.8 356 55.6
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.4e-84 317.4 341 55.1
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 1.4e-84 317.4 353 53.3
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.4e-84 317.4 354 50.6
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 3.2e-84 316.2 352 59.1
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 7.2e-84 315.1 345 58.8
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.6e-83 313.9 346 54.3
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.1e-83 313.5 358 56.7
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.7e-83 313.2 346 52.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 3.6e-83 312.8 352 49.7
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 4.6e-83 312.4 349 58.2
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 4.6e-83 312.4 357 51.3
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 7.9e-83 311.6 366 59.8
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 7.9e-83 311.6 349 56.2
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 7.9e-83 311.6 366 60.1
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 1.4e-82 310.8 356 56.2
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.4e-82 310.8 350 54.3
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 1.8e-82 310.5 354 59.0
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 3.9e-82 309.3 355 51.3
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 5.1e-82 308.9 354 57.3
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.1e-82 308.9 374 59.9
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.1e-82 308.9 375 61.1
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.5e-81 307.4 355 51.0
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.0e-81 307.0 352 50.9
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 2.0e-81 307.0 345 58.3
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 1.3e-80 304.3 353 53.8
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 2.8e-80 303.1 374 59.6
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 2.8e-80 303.1 354 48.9
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 8.2e-80 301.6 350 54.9
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.4e-79 300.8 397 52.1
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.8e-79 300.4 373 55.5
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.8e-79 300.4 368 53.5
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 3.1e-79 299.7 352 50.9
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 4.1e-79 299.3 346 50.9
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 4.1e-79 299.3 347 57.9
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 5.3e-79 298.9 348 54.9
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 7.7e-78 295.0 346 45.7
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.7e-77 293.9 351 52.4
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 2.2e-77 293.5 353 49.6
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 3.8e-77 292.7 353 56.1
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 1.1e-76 291.2 346 45.1
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 2.5e-76 290.0 352 52.0
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.2e-76 289.7 354 46.3
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 5.5e-76 288.9 353 55.5
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.5e-76 288.9 354 46.3
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.6e-75 287.3 354 52.3
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 4.7e-75 285.8 354 54.2
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 4.7e-75 285.8 355 55.5
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.9e-75 285.0 354 46.3
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 1.8e-74 283.9 354 54.8
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 3.0e-74 283.1 354 50.3
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 8.8e-74 281.6 357 48.2
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.5e-73 280.8 346 49.1
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 3.3e-73 279.6 359 48.7
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.4e-73 279.3 354 49.2
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 9.7e-73 278.1 356 50.8
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.8e-72 275.8 354 49.4
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 5.3e-71 272.3 358 52.8
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.0e-71 271.9 294 60.5
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 4.5e-70 269.2 351 49.6
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 2.2e-69 266.9 338 52.4
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 2.2e-69 266.9 352 44.9
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 2.9e-69 266.5 303 52.1
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 1.1e-68 264.6 363 51.2
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 1.1e-68 264.6 363 51.2
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 3.2e-68 263.1 340 52.1
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 4.2e-68 262.7 363 51.0
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.2e-68 262.7 351 49.0
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 5.5e-68 262.3 372 49.5
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 7.2e-68 261.9 361 56.0
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 1.6e-67 260.8 351 45.9
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.1e-67 260.4 354 43.8
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 3.6e-67 259.6 379 55.7
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 4.7e-67 259.2 372 48.9
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 4.7e-67 259.2 372 48.9
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 4.7e-67 259.2 372 48.9
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 4.7e-67 259.2 336 51.8
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.0e-66 258.1 372 48.9
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 1.4e-66 257.7 340 54.1
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 2.3e-66 256.9 358 51.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 2.3e-66 256.9 349 49.9
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 5.2e-66 255.8 365 51.0
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 6.7e-66 255.4 385 56.1
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 8.8e-66 255.0 349 53.6
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 4.4e-65 252.7 354 52.5
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 4.8e-64 249.2 333 42.6
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 8.2e-64 248.4 339 51.9
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 2.7e-59 233.4 351 41.0
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 3.0e-58 229.9 358 49.7
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 7.5e-57 225.3 352 41.2
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.5e-52 211.1 365 39.7
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 7.5e-49 198.7 353 36.5
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 4.1e-47 193.0 335 41.5
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 6.6e-45 185.7 352 40.9
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.5e-44 184.5 259 40.9
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 2.5e-44 183.7 275 54.5
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.4e-39 167.9 122 64.8
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 1.8e-39 167.5 133 60.9
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 9.2e-39 165.2 142 55.6
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 8.6e-37 158.7 388 37.4
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.2e-33 148.3 132 55.3
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.5e-30 136.7 119 56.3
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.1e-28 131.7 134 47.0
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.3e-28 129.8 189 43.9
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 7.8e-22 109.0 147 44.2
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 5.6e-20 102.8 338 26.3
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.2e-19 101.7 114 47.4
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.0e-17 94.4 240 39.6
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 4.9e-16 89.7 362 29.0
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 1.1e-10 72.0 51 62.7
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 5.2e-10 69.7 58 56.9
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 5.8e-09 66.2 127 33.9
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 1.2e-06 58.5 90 36.7


User provided reference genes

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