Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 7.3e-104 380.6 192 100.0
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 5.2e-102 374.4 192 98.4
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 6.9e-86 320.9 192 78.6
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 8.7e-81 303.9 192 78.1
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 5.3e-78 294.7 190 72.6
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 9.9e-77 290.4 192 72.9
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 4.9e-76 288.1 192 71.9
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 4.2e-75 285.0 192 71.4
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.2e-74 283.5 192 75.0
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.2e-74 283.5 201 68.7
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.6e-74 283.1 190 70.0
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 1.6e-74 283.1 192 71.9
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 3.5e-74 282.0 192 74.5
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 3.5e-74 282.0 190 71.6
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 4.6e-74 281.6 194 70.6
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 6.0e-74 281.2 192 69.3
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 6.0e-74 281.2 192 69.3
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 3.0e-73 278.9 192 70.3
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 3.9e-73 278.5 190 70.0
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 5.1e-73 278.1 188 64.9
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 6.7e-73 277.7 192 69.8
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 6.7e-73 277.7 198 66.7
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 8.7e-73 277.3 192 70.3
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.9e-72 276.2 191 70.7
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 3.3e-72 275.4 192 69.3
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 4.3e-72 275.0 186 72.0
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 5.6e-72 274.6 192 67.2
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 7.4e-72 274.2 198 65.7
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 7.4e-72 274.2 190 65.8
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.3e-71 273.5 192 69.8
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.3e-71 273.5 194 68.6
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.3e-71 273.5 195 68.2
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.3e-71 273.5 194 68.6
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.6e-71 273.1 190 67.9
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 2.1e-71 272.7 187 70.1
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 3.7e-71 271.9 192 66.1
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 3.7e-71 271.9 192 66.1
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 4.8e-71 271.6 196 69.4
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 4.8e-71 271.6 192 66.7
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 8.2e-71 270.8 192 67.2
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 8.2e-71 270.8 186 70.4
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 8.2e-71 270.8 200 65.0
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.1e-70 270.4 192 67.2
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 3.1e-70 268.9 192 67.2
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.1e-70 268.9 192 68.2
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.1e-70 268.9 192 69.8
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.1e-70 268.9 192 69.8
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 4.0e-70 268.5 192 67.2
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 6.9e-70 267.7 192 66.1
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.2e-69 266.9 190 64.2
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.2e-69 266.9 186 69.4
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.2e-69 266.9 186 71.0
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 2.0e-69 266.2 192 65.1
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.4e-69 265.4 192 66.7
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 4.5e-69 265.0 192 65.6
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 4.5e-69 265.0 190 66.8
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 7.6e-69 264.2 190 65.3
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 7.6e-69 264.2 190 65.3
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.0e-68 263.8 190 65.3
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.0e-68 263.8 264 54.9
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 2.2e-68 262.7 190 64.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.9e-68 262.3 190 64.2
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.8e-68 261.9 189 64.6
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 3.8e-68 261.9 189 65.6
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 8.4e-68 260.8 192 66.7
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.1e-67 260.4 189 64.6
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.4e-67 260.0 216 63.4
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 5.5e-67 258.1 192 66.7
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 5.5e-67 258.1 190 65.8
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 7.1e-67 257.7 186 66.1
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.6e-66 256.5 192 65.1
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.6e-66 256.5 191 62.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.6e-66 256.5 202 66.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.7e-66 255.8 192 64.1
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.6e-66 255.0 192 64.1
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 4.6e-66 255.0 190 63.2
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 6.0e-66 254.6 192 64.1
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 6.0e-66 254.6 192 64.1
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 7.9e-66 254.2 189 64.6
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.0e-65 253.8 186 67.2
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.3e-65 253.4 202 61.4
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 3.9e-65 251.9 188 61.7
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 5.1e-65 251.5 197 62.9
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.1e-64 250.4 186 65.6
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.5e-64 250.0 182 68.1
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 1.5e-64 250.0 191 60.7
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 5.7e-64 248.1 188 60.1
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 2.2e-63 246.1 203 60.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.0e-60 237.3 156 75.6
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 8.5e-60 234.2 159 71.7
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.5e-59 232.6 191 61.3
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.2e-58 230.3 159 71.1
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.8e-57 226.5 157 70.7
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 2.3e-57 226.1 191 57.1
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.2e-53 213.8 186 54.8
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.0e-53 213.0 159 65.4
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 6.5e-52 208.0 187 52.9
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 5.5e-51 204.9 157 61.1
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 6.1e-50 201.4 172 58.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.0e-49 200.7 163 59.5
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.4e-49 200.3 159 62.3
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 3.9e-49 198.7 192 56.2
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.1e-46 190.7 153 56.9
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.5e-45 186.8 157 55.4
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.3e-44 183.7 138 62.3
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.3e-40 169.1 133 63.9
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.3e-39 167.2 195 47.2
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.0e-37 159.8 190 44.7
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 6.5e-36 154.8 191 43.5
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 2.0e-32 143.3 191 42.4
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.2e-29 134.0 186 39.8
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 4.5e-29 132.1 78 82.1
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 6.1e-26 121.7 190 40.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 2.8e-18 96.3 56 78.6


User provided reference genes

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