Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2295 Papaver somniferum HOM05D004006 ORTHO05D004585 9.9e-144 513.5 262 100.0
PSO528G0204 Papaver somniferum HOM05D004006 ORTHO05D004585 6.0e-117 424.5 259 86.5
Nn5g28281 Nelumbo nucifera HOM05D004006 ORTHO05D004585 4.1e-33 146.0 259 42.9
Thecc.08G124900 Theobroma cacao HOM05D004006 ORTHO05D004585 4.1e-33 146.0 262 41.6
Aqoxy6G00215 Aquilegia oxysepala HOM05D004006 ORTHO05D004585 5.4e-33 145.6 262 42.4
Duzib093G0488 Durio zibethinus HOM05D004006 ORTHO05D004585 2.7e-32 143.3 263 43.3
Manes.18G077000 Manihot esculenta HOM05D004006 ORTHO05D004585 4.6e-32 142.5 261 42.1
CiPaw.06G030700 Carya illinoinensis HOM05D004006 ORTHO05D004585 6.0e-32 142.1 263 43.0
Nn1g08787 Nelumbo nucifera HOM05D004006 ORTHO05D004585 7.8e-32 141.7 251 41.8
CSS0019596 Camellia sinensis var. sinensis HOM05D004006 ORTHO05D004585 1.3e-31 141.0 256 41.0
Ciclev10002301m.g Citrus clementina HOM05D004006 ORTHO05D004585 1.3e-31 141.0 262 42.4
Haze_00445 Corylus avellana HOM05D004006 ORTHO05D004585 1.7e-31 140.6 264 40.5
Cfa016015 Carpinus fangiana HOM05D004006 ORTHO05D004585 3.0e-31 139.8 263 41.8
Eucgr.F04353 Eucalyptus grandis HOM05D004006 ORTHO05D004585 3.9e-31 139.4 260 41.9
Manes.02G162900 Manihot esculenta HOM05D004006 ORTHO05D004585 5.1e-31 139.0 254 40.6
PGR044G2543 Punica granatum HOM05D004006 ORTHO05D004585 8.6e-31 138.3 257 40.9
Potri.002G083900 Populus trichocarpa HOM05D004006 ORTHO05D004585 3.3e-30 136.3 253 41.9
TAR628G0258 Trochodendron aralioides HOM05D004006 ORTHO05D004585 4.7e-29 132.5 259 41.7
GSVIVG01008871001 Vitis vinifera HOM05D004006 ORTHO05D004585 6.2e-29 132.1 233 39.9
Dinv27317 Davidia involucrata HOM05D004006 ORTHO05D004585 3.1e-28 129.8 259 39.0
TWI56G0850 Tripterygium wilfordii HOM05D004006 ORTHO05D004585 3.1e-28 129.8 258 40.3
Potri.005G177600 Populus trichocarpa HOM05D004006 ORTHO05D004585 5.2e-28 129.0 259 38.6
FAN27G3464 Fragaria x ananassa HOM05D004006 ORTHO05D004585 8.9e-28 128.3 259 39.0
MD15G1349700 Malus domestica HOM05D004006 ORTHO05D004585 8.9e-28 128.3 261 39.5
TWI36G0058 Tripterygium wilfordii HOM05D004006 ORTHO05D004585 1.2e-27 127.9 254 40.9
EL10Ac1g01007 Beta vulgaris HOM05D004006 ORTHO05D004585 2.6e-27 126.7 252 40.9
THA.LOC104800196 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 2.6e-27 126.7 262 38.9
FAN20G2831 Fragaria x ananassa HOM05D004006 ORTHO05D004585 3.4e-27 126.3 259 38.2
Phvul.009G124900 Phaseolus vulgaris HOM05D004006 ORTHO05D004585 3.4e-27 126.3 263 36.1
Lj1g0016270 Lotus japonicus HOM05D004006 ORTHO05D004585 4.4e-27 125.9 266 39.1
vmacro00834 Vaccinium macrocarpon HOM05D004006 ORTHO05D004585 4.4e-27 125.9 259 37.5
Gohir.D01G180600 Gossypium hirsutum HOM05D004006 ORTHO05D004585 5.8e-27 125.6 255 40.4
Gorai.002G222000 Gossypium raimondii HOM05D004006 ORTHO05D004585 5.8e-27 125.6 255 40.4
Duzib116G0782 Durio zibethinus HOM05D004006 ORTHO05D004585 9.9e-27 124.8 262 38.5
FAN24G3177 Fragaria x ananassa HOM05D004006 ORTHO05D004585 9.9e-27 124.8 259 38.6
Prupe.1G498100 Prunus persica HOM05D004006 ORTHO05D004585 9.9e-27 124.8 264 37.9
FvH4_2g26860 Fragaria vesca HOM05D004006 ORTHO05D004585 2.2e-26 123.6 259 38.6
TAR376G1087 Trochodendron aralioides HOM05D004006 ORTHO05D004585 2.2e-26 123.6 259 41.3
RcHm_v2.0_Chr6g0295711 Rosa chinensis HOM05D004006 ORTHO05D004585 3.7e-26 122.9 259 37.5
COL.COLO4_35922 Corchorus olitorius HOM05D004006 ORTHO05D004585 6.4e-26 122.1 262 38.2
Cc10_g11860 Coffea canephora HOM05D004006 ORTHO05D004585 1.1e-25 121.3 260 37.7
Lj7P340T24 Lonicera japonica HOM05D004006 ORTHO05D004585 1.1e-25 121.3 260 37.7
Hma1.2p1_0186F.1_g081800 Hydrangea macrophylla HOM05D004006 ORTHO05D004585 1.4e-25 120.9 259 37.5
Gohir.A01G188900 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.9e-25 120.6 260 39.6
MD08G1163000 Malus domestica HOM05D004006 ORTHO05D004585 3.2e-25 119.8 259 36.3
Duzib041G0805 Durio zibethinus HOM05D004006 ORTHO05D004585 5.4e-25 119.0 216 39.8
Gorai.009G245700 Gossypium raimondii HOM05D004006 ORTHO05D004585 5.4e-25 119.0 265 37.4
Gohir.A05G235000 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.2e-24 117.9 265 37.0
Gohir.D05G237300 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.2e-24 117.9 265 37.4
MBI16_g07656_MAGBIO Magnolia biondii HOM05D004006 ORTHO05D004585 1.2e-24 117.9 236 40.7
Glyma.04G249900 Glycine max HOM05D004006 ORTHO05D004585 1.6e-24 117.5 261 36.8
Atru.chr13.1448 Acer truncatum HOM05D004006 ORTHO05D004585 2.1e-24 117.1 259 36.7
Atru.chr13.1472 Acer truncatum HOM05D004006 ORTHO05D004585 2.1e-24 117.1 259 36.7
Rhsim06G0103600 Rhododendron simsii HOM05D004006 ORTHO05D004585 3.5e-24 116.3 261 39.1
CSS0040709 Camellia sinensis var. sinensis HOM05D004006 ORTHO05D004585 6.0e-24 115.5 263 39.5
SGA_v2.0_scaffold52G18967 Striga asiatica HOM05D004006 ORTHO05D004585 6.0e-24 115.5 254 38.2
TPR.G21067 Trifolium pratense HOM05D004006 ORTHO05D004585 1.0e-23 114.8 263 35.7
MSTRG.22410 Avicennia marina HOM05D004006 ORTHO05D004585 1.3e-23 114.4 253 36.8
ClCG08G005630 Citrullus lanatus HOM05D004006 ORTHO05D004585 1.7e-23 114.0 260 38.1
MSTRG.1442 Avicennia marina HOM05D004006 ORTHO05D004585 3.9e-23 112.8 248 36.7
Medtr3g088010 Medicago truncatula HOM05D004006 ORTHO05D004585 3.9e-23 112.8 264 35.6
Thhalv10008805m.g Eutrema salsugineum HOM05D004006 ORTHO05D004585 8.6e-23 111.7 255 34.9
Hund17292 Selenicereus undatus HOM05D004006 ORTHO05D004585 8.6e-23 111.7 266 36.5
CsaV3_6G034510 Cucumis sativus L. HOM05D004006 ORTHO05D004585 1.1e-22 111.3 260 36.9
Oeu050916.1 Olea europaea HOM05D004006 ORTHO05D004585 1.5e-22 110.9 261 36.0
Oeu050917.2 Olea europaea HOM05D004006 ORTHO05D004585 1.5e-22 110.9 261 36.8
Lalb_Chr23g0271011 Lupinus albus HOM05D004006 ORTHO05D004585 1.9e-22 110.5 260 33.8
MBI09_g12159_MAGBIO Magnolia biondii HOM05D004006 ORTHO05D004585 1.9e-22 110.5 227 37.0
Actinidia21321 Actinidia chinensis HOM05D004006 ORTHO05D004585 2.5e-22 110.2 260 36.2
Peaxi162Scf00018g00027 Petunia axillaris HOM05D004006 ORTHO05D004585 2.5e-22 110.2 261 33.7
PGSC0003DMG400027788 Solanum tuberosum HOM05D004006 ORTHO05D004585 2.5e-22 110.2 249 36.9
Nitab4.5_0016080g0010 Nicotiana tabacum HOM05D004006 ORTHO05D004585 3.3e-22 109.8 251 34.3
AL1G35020 Arabidopsis lyrata HOM05D004006 ORTHO05D004585 4.3e-22 109.4 260 35.4
Gohir.D02G080400 Gossypium hirsutum HOM05D004006 ORTHO05D004585 4.3e-22 109.4 266 35.0
Ca_16556_v3 Cicer arietinum L. HOM05D004006 ORTHO05D004585 5.6e-22 109.0 271 34.3
Gorai.005G089800 Gossypium raimondii HOM05D004006 ORTHO05D004585 5.6e-22 109.0 266 35.3
CARHR022190 Cardamine hirsuta HOM05D004006 ORTHO05D004585 7.3e-22 108.6 260 35.0
THA.LOC104813655 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 7.3e-22 108.6 260 36.5
Carub.0001s2127 Capsella rubella HOM05D004006 ORTHO05D004585 9.6e-22 108.2 260 35.4
Glyma.13G079800 Glycine max HOM05D004006 ORTHO05D004585 9.6e-22 108.2 260 33.1
MELO3C010605.2 Cucumis melo HOM05D004006 ORTHO05D004585 1.2e-21 107.8 260 36.2
Glyma.06G113000 Glycine max HOM05D004006 ORTHO05D004585 1.2e-21 107.8 258 34.9
BcaB03g14254 Brassica carinata HOM05D004006 ORTHO05D004585 2.1e-21 107.1 254 34.3
Sed0014468 Sechium edule HOM05D004006 ORTHO05D004585 2.1e-21 107.1 259 35.9
Lalb_Chr08g0241451 Lupinus albus HOM05D004006 ORTHO05D004585 4.7e-21 105.9 262 34.4
Gohir.A02G073100 Gossypium hirsutum HOM05D004006 ORTHO05D004585 6.2e-21 105.5 266 35.3
Sp1g19380 Schrenkiella parvula HOM05D004006 ORTHO05D004585 6.2e-21 105.5 255 33.7
Lalb_Chr10g0101721 Lupinus albus HOM05D004006 ORTHO05D004585 1.1e-20 104.8 254 35.0
VMungo1309G2318 Vigna mungo HOM05D004006 ORTHO05D004585 1.1e-20 104.8 257 35.0
BcaC06g34904 Brassica carinata HOM05D004006 ORTHO05D004585 2.4e-20 103.6 255 34.1
A08p28790 Brassica napus HOM05D004006 ORTHO05D004585 2.4e-20 103.6 261 35.2
C07p21950 Brassica napus HOM05D004006 ORTHO05D004585 2.4e-20 103.6 255 34.1
BolC7t42725H Brassica oleracea HOM05D004006 ORTHO05D004585 2.4e-20 103.6 255 34.1
BraA08t34808Z Brassica rapa HOM05D004006 ORTHO05D004585 2.4e-20 103.6 261 35.2
CANSAT25G0779 Cannabis sativa HOM05D004006 ORTHO05D004585 2.4e-20 103.6 276 35.9
arahy.Tifrunner.gnm1.ann1.J26PKP Arachis hypogaea HOM05D004006 ORTHO05D004585 3.1e-20 103.2 262 34.4
SGA_v2.0_scaffold24G10460 Striga asiatica HOM05D004006 ORTHO05D004585 3.1e-20 103.2 245 33.5
Nitab4.5_0000051g0220 Nicotiana tabacum HOM05D004006 ORTHO05D004585 4.0e-20 102.8 252 32.5
CDE02G3357 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 5.2e-20 102.4 258 36.4
BcaC07g39124 Brassica carinata HOM05D004006 ORTHO05D004585 6.8e-20 102.1 255 33.7
C08p21130 Brassica napus HOM05D004006 ORTHO05D004585 6.8e-20 102.1 255 33.7
BolC8t49750H Brassica oleracea HOM05D004006 ORTHO05D004585 6.8e-20 102.1 255 33.7
AT1G21830 Arabidopsis thaliana HOM05D004006 ORTHO05D004585 1.2e-19 101.3 260 33.5
Dinv07222 Davidia involucrata HOM05D004006 ORTHO05D004585 2.6e-19 100.1 189 41.8
arahy.Tifrunner.gnm1.ann1.CFE04G Arachis hypogaea HOM05D004006 ORTHO05D004585 4.4e-19 99.4 254 33.5
Oeu059434.1 Olea europaea HOM05D004006 ORTHO05D004585 9.9e-19 98.2 246 32.9
Solyc11g013450.2 Solanum lycopersicum HOM05D004006 ORTHO05D004585 1.3e-18 97.8 249 33.7
RhsimUnG0092700 Rhododendron simsii HOM05D004006 ORTHO05D004585 1.7e-18 97.4 257 33.1
Glyma.14G150000 Glycine max HOM05D004006 ORTHO05D004585 2.2e-18 97.1 238 34.0
Hund26811 Selenicereus undatus HOM05D004006 ORTHO05D004585 2.2e-18 97.1 230 34.3
A07p14920 Brassica napus HOM05D004006 ORTHO05D004585 3.8e-18 96.3 255 32.9
BraA07t29235Z Brassica rapa HOM05D004006 ORTHO05D004585 3.8e-18 96.3 255 32.9
BcaB07g32181 Brassica carinata HOM05D004006 ORTHO05D004585 4.9e-18 95.9 258 32.2
BcaC05g26103 Brassica carinata HOM05D004006 ORTHO05D004585 4.9e-18 95.9 258 32.2
C05p20810 Brassica napus HOM05D004006 ORTHO05D004585 4.9e-18 95.9 258 32.2
BolC5t30780H Brassica oleracea HOM05D004006 ORTHO05D004585 4.9e-18 95.9 258 32.2
A06p17910 Brassica napus HOM05D004006 ORTHO05D004585 2.4e-17 93.6 258 34.1
BraA06t24881Z Brassica rapa HOM05D004006 ORTHO05D004585 2.4e-17 93.6 258 34.1
MSTRG.25384 Avicennia marina HOM05D004006 ORTHO05D004585 3.2e-17 93.2 265 31.7
Oeu026152.1 Olea europaea HOM05D004006 ORTHO05D004585 3.2e-17 93.2 247 34.8
Migut.C01125 Erythranthe guttata HOM05D004006 ORTHO05D004585 4.2e-17 92.8 247 33.6
ATR0584G004 Amborella trichopoda HOM05D004006 ORTHO05D004585 5.4e-17 92.4 246 31.3
BcaB03g11881 Brassica carinata HOM05D004006 ORTHO05D004585 7.1e-17 92.0 254 32.7
Psat5g087920 Pisum sativum HOM05D004006 ORTHO05D004585 1.2e-16 91.3 264 32.2
Oeu047951.1 Olea europaea HOM05D004006 ORTHO05D004585 2.1e-16 90.5 247 32.4
CDE08G0380 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 3.5e-16 89.7 247 35.6
SalBow6G7056 Salvia bowleyana HOM05D004006 ORTHO05D004585 7.8e-16 88.6 250 33.2
Actinidia03470 Actinidia chinensis HOM05D004006 ORTHO05D004585 1.3e-15 87.8 221 31.7
SGA_v2.0_scaffold25G11123 Striga asiatica HOM05D004006 ORTHO05D004585 1.3e-15 87.8 243 32.1
Actinidia29465 Actinidia chinensis HOM05D004006 ORTHO05D004585 1.7e-15 87.4 254 32.3
BcaB07g32179 Brassica carinata HOM05D004006 ORTHO05D004585 1.7e-15 87.4 255 31.0
Os04g0690500 Oryza sativa ssp. japonica HOM05D004006 ORTHO05D004585 8.7e-15 85.1 264 30.3
Cpa.g.sc64.85 Carica papaya HOM05D004006 ORTHO05D004585 2.5e-14 83.6 145 39.3
Migut.N03284 Erythranthe guttata HOM05D004006 ORTHO05D004585 9.6e-14 81.6 235 31.9
DCAR_014087 Daucus carota HOM05D004006 ORTHO05D004585 3.6e-13 79.7 235 35.3
HanXRQChr04g0125261 Helianthus annuus HOM05D004006 ORTHO05D004585 4.0e-12 76.3 252 26.6
Lsat_1_v5_gn_5_101481 Lactuca sativa HOM05D004006 ORTHO05D004585 5.3e-12 75.9 249 30.1
AUR62014339 Chenopodium quinoa HOM05D004006 ORTHO05D004585 9.0e-12 75.1 148 40.5
Sopen11g008440 Solanum pennellii HOM05D004006 ORTHO05D004585 9.0e-12 75.1 180 37.2
Gohir.D05G270600 Gossypium hirsutum HOM05D004006 ORTHO05D004585 5.8e-11 72.4 205 32.7
Gorai.009G283200 Gossypium raimondii HOM05D004006 ORTHO05D004585 5.8e-11 72.4 202 33.2
PSO017G3194 Papaver somniferum HOM05D004006 ORTHO05D004585 7.6e-11 72.0 279 29.0
THA.LOC104806821 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 2.9e-10 70.1 259 27.8
SalBow7G3581 Salvia bowleyana HOM05D004006 ORTHO05D004585 3.8e-10 69.7 246 27.2
CDE06G0283 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 2.4e-09 67.0 129 41.1
THA.LOC104817318 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 7.1e-09 65.5 246 26.8
Carub.0001s3524 Capsella rubella HOM05D004006 ORTHO05D004585 1.6e-08 64.3 210 26.7
Thhalv10011817m.g Eutrema salsugineum HOM05D004006 ORTHO05D004585 1.6e-08 64.3 212 29.2
Sabra05G0134100 Salix brachista HOM05D004006 ORTHO05D004585 2.1e-08 63.9 119 39.5
Sabra02G0065700 Salix brachista HOM05D004006 ORTHO05D004585 2.7e-08 63.5 125 40.0
CDE08G1629 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 7.8e-08 62.0 135 39.3
CARHR035970 Cardamine hirsuta HOM05D004006 ORTHO05D004585 1.3e-07 61.2 215 27.4
HPP92_011945 Vanilla planifolia HOM05D004006 ORTHO05D004585 3.0e-07 60.1 213 24.9
AT1G44608 Arabidopsis thaliana HOM05D004006 ORTHO05D004585 6.6e-07 58.9 134 35.1
BcaC08g42859 Brassica carinata HOM05D004006 ORTHO05D004585 6.6e-07 58.9 211 25.1
C06p00700 Brassica napus HOM05D004006 ORTHO05D004585 6.6e-07 58.9 211 25.1
BolC6t35208H Brassica oleracea HOM05D004006 ORTHO05D004585 8.7e-07 58.5 211 24.6
AL1G52380 Arabidopsis lyrata HOM05D004006 ORTHO05D004585 1.1e-06 58.2 210 30.0
Phvul.008G163001 Phaseolus vulgaris HOM05D004006 ORTHO05D004585 1.1e-06 58.2 41 58.5
A10p07490 Brassica napus HOM05D004006 ORTHO05D004585 1.5e-06 57.8 211 24.2
BraSC36t46058Z Brassica rapa HOM05D004006 ORTHO05D004585 1.5e-06 57.8 211 24.2
VMungo0647G0089 Vigna mungo HOM05D004006 ORTHO05D004585 1.5e-06 57.8 135 32.6
Nn5g27936 Nelumbo nucifera HOM05D004006 ORTHO05D004585 1.9e-06 57.4 90 36.7
Aa31LG7G5780 Aethionema arabicum HOM05D004006 ORTHO05D004585 2.5e-06 57.0 141 34.0
Sp1g33590 Schrenkiella parvula HOM05D004006 ORTHO05D004585 3.3e-06 56.6 211 26.5
Lj4C625T3 Lonicera japonica HOM05D004006 ORTHO05D004585 4.3e-06 56.2 71 49.3


User provided reference genes

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