Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 4.1e-201 704.5 358 100.0
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.9e-193 679.1 358 96.4
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.6e-94 349.7 349 55.0
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 9.8e-94 347.8 345 55.1
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.2e-93 346.7 358 53.6
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.8e-92 343.6 296 60.5
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 4.1e-92 342.4 296 60.1
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 5.4e-92 342.0 305 57.0
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 2.0e-91 340.1 343 55.4
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 1.3e-90 337.4 296 59.5
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.7e-90 337.0 343 53.9
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 1.7e-90 337.0 348 55.2
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 5.6e-89 332.0 360 51.9
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.6e-88 330.5 334 52.7
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 6.1e-88 328.6 329 55.0
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 5.2e-87 325.5 346 52.6
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.5e-86 323.9 299 56.9
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.5e-86 323.9 343 51.6
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.6e-86 323.2 347 51.6
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 4.4e-86 322.4 299 56.5
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 9.8e-86 321.2 344 53.8
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 9.8e-86 321.2 350 51.7
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 1.3e-85 320.9 308 55.5
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 2.9e-85 319.7 311 55.6
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 3.7e-85 319.3 297 56.9
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 3.7e-85 319.3 343 51.6
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 4.9e-85 318.9 352 50.3
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 2.4e-84 316.6 345 51.3
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 2.4e-84 316.6 354 48.3
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 5.4e-84 315.5 299 56.9
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 7.0e-84 315.1 345 52.2
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 1.2e-83 314.3 349 53.3
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 1.6e-83 313.9 348 52.9
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.6e-83 313.9 334 52.4
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 7.8e-83 311.6 298 53.4
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.0e-82 311.2 345 51.0
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 1.3e-82 310.8 349 52.7
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.7e-82 310.5 300 56.7
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.7e-82 310.5 298 53.7
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 1.7e-82 310.5 305 53.4
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.3e-82 310.1 300 55.3
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 2.3e-82 310.1 344 50.3
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 1.1e-81 307.8 343 48.1
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.9e-81 307.0 339 51.6
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.9e-81 307.0 313 54.6
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 2.5e-81 306.6 340 50.9
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 7.3e-81 305.1 341 49.3
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.2e-80 304.3 298 56.4
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.8e-80 303.1 343 51.0
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 4.7e-80 302.4 341 50.1
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 4.7e-80 302.4 339 49.0
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.4e-79 300.8 295 52.9
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.8e-79 300.4 340 49.7
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.1e-79 299.7 305 54.1
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.1e-79 299.7 300 51.0
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 3.1e-79 299.7 299 52.2
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 4.0e-79 299.3 340 49.7
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 4.0e-79 299.3 296 53.4
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 4.0e-79 299.3 284 55.6
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 8.9e-79 298.1 343 47.5
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 8.9e-79 298.1 310 53.9
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 2.6e-78 296.6 344 48.0
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-78 296.2 340 49.4
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-78 296.2 340 49.4
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-78 296.2 340 49.4
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-78 296.2 340 49.4
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.4e-78 296.2 296 54.7
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 5.8e-78 295.4 303 51.8
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 9.8e-78 294.7 341 48.4
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.3e-77 294.3 299 53.5
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 2.2e-77 293.5 296 54.1
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 3.7e-77 292.7 352 46.6
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 6.4e-77 292.0 299 52.8
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 6.4e-77 292.0 300 52.0
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.1e-76 291.2 346 47.1
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.4e-76 290.8 340 47.4
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.4e-76 290.0 341 46.0
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 2.4e-76 290.0 306 52.9
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 7.0e-76 288.5 296 54.1
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.2e-75 287.7 324 48.5
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 2.1e-75 287.0 289 51.9
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 5.0e-74 282.3 344 46.8
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 5.0e-74 282.3 343 46.1
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.8e-72 276.6 260 57.3
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 6.8e-71 271.9 337 46.9
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.4e-70 269.6 298 48.3
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 5.8e-70 268.9 271 55.0
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 9.9e-70 268.1 265 53.6
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 3.7e-69 266.2 306 47.1
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 5.1e-66 255.8 399 39.3
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.9e-65 253.8 265 52.1
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 1.4e-63 247.7 310 45.5
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 2.0e-62 243.8 257 50.2
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 3.4e-62 243.0 293 48.1
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 1.3e-61 241.1 321 43.6
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 1.0e-58 231.5 297 44.4
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.8e-55 220.7 396 36.4
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 7.6e-46 188.7 343 37.0
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.9e-45 186.8 256 46.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 6.4e-45 185.7 254 41.7
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 2.6e-38 163.7 132 60.6
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 2.2e-37 160.6 192 47.4
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 7.9e-35 152.1 217 41.9
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 5.1e-34 149.4 174 47.7
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 6.7e-34 149.1 167 50.3
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-33 148.3 128 54.7
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.9e-33 147.5 128 53.9
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 7.4e-33 145.6 128 53.9
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 2.6e-30 137.1 170 45.9
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 1.3e-21 108.2 186 31.2
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.9e-20 104.4 251 31.5
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 2.7e-19 100.5 88 53.4
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 7.9e-19 99.0 131 43.5
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 3.9e-18 96.7 201 35.8
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 6.1e-11 72.8 107 42.1
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.7e-08 64.7 70 42.9
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.4e-07 60.8 57 49.1
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 2.6e-06 57.4 61 50.8


User provided reference genes

Program Settings