Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2262 Papaver somniferum HOM05D004272 ORTHO05D005020 2.1e-194 682.2 339 100.0
PSO782G4024 Papaver somniferum HOM05D004272 ORTHO05D005020 2.8e-143 512.3 341 76.2
PSO170G2167 Papaver somniferum HOM05D004272 ORTHO05D005020 8.9e-137 490.7 325 76.6
Aqoxy6G00139 Aquilegia oxysepala HOM05D004272 ORTHO05D005020 1.2e-128 463.8 339 68.4
GSVIVG01034890001 Vitis vinifera HOM05D004272 ORTHO05D005020 7.0e-126 454.5 335 68.4
THA.LOC104800104 Tarenaya hassleriana HOM05D004272 ORTHO05D005020 8.6e-124 447.6 327 65.7
Ciclev10001727m.g Citrus clementina HOM05D004272 ORTHO05D005020 5.6e-123 444.9 339 66.1
Sabra13G0097600 Salix brachista HOM05D004272 ORTHO05D005020 1.2e-122 443.7 341 64.2
CiPaw.15G083400 Carya illinoinensis HOM05D004272 ORTHO05D005020 1.6e-122 443.4 337 64.7
Manes.18G099100 Manihot esculenta HOM05D004272 ORTHO05D005020 2.1e-122 443.0 341 64.8
Potri.013G115400 Populus trichocarpa HOM05D004272 ORTHO05D005020 8.0e-122 441.0 338 64.2
QL02p034274 Quercus lobata HOM05D004272 ORTHO05D005020 1.1e-121 440.7 315 68.3
CANSAT25G2208 Cannabis sativa HOM05D004272 ORTHO05D005020 1.5e-120 436.8 315 66.7
Dinv12903 Davidia involucrata HOM05D004272 ORTHO05D005020 1.5e-120 436.8 335 65.7
Prupe.8G052200 Prunus persica HOM05D004272 ORTHO05D005020 2.6e-120 436.0 336 65.2
Thecc.08G200200 Theobroma cacao HOM05D004272 ORTHO05D005020 5.8e-120 434.9 335 65.1
CSS0015299 Camellia sinensis var. sinensis HOM05D004272 ORTHO05D005020 1.3e-119 433.7 342 64.0
Carub.0002s1862 Capsella rubella HOM05D004272 ORTHO05D005020 4.9e-119 431.8 322 64.6
Sp5g26920 Schrenkiella parvula HOM05D004272 ORTHO05D005020 1.1e-118 430.6 344 63.1
SpUn0020_0060 Schrenkiella parvula HOM05D004272 ORTHO05D005020 1.1e-118 430.6 344 63.1
Gohir.A09G116800 Gossypium hirsutum HOM05D004272 ORTHO05D005020 1.4e-118 430.3 336 62.8
CiPaw.16G063800 Carya illinoinensis HOM05D004272 ORTHO05D005020 2.4e-118 429.5 334 63.5
Gorai.006G131400 Gossypium raimondii HOM05D004272 ORTHO05D005020 2.4e-118 429.5 336 62.8
MD10G1045300 Malus domestica HOM05D004272 ORTHO05D005020 2.4e-118 429.5 338 64.5
RcHm_v2.0_Chr6g0272381 Rosa chinensis HOM05D004272 ORTHO05D005020 2.4e-118 429.5 327 64.8
TPR.G15693 Trifolium pratense HOM05D004272 ORTHO05D005020 2.4e-118 429.5 333 63.4
Cc00_g04120 Coffea canephora HOM05D004272 ORTHO05D005020 4.1e-118 428.7 337 64.1
Medtr1g096990 Medicago truncatula HOM05D004272 ORTHO05D005020 1.2e-117 427.2 334 63.5
Gohir.D09G113700 Gossypium hirsutum HOM05D004272 ORTHO05D005020 1.6e-117 426.8 336 62.5
Ca_10628_v3 Cicer arietinum L. HOM05D004272 ORTHO05D005020 2.1e-117 426.4 329 63.2
Cpa.g.sc64.134 Carica papaya HOM05D004272 ORTHO05D005020 2.7e-117 426.0 338 66.0
Phvul.007G087900 Phaseolus vulgaris HOM05D004272 ORTHO05D005020 2.7e-117 426.0 323 64.4
Eucgr.F04145 Eucalyptus grandis HOM05D004272 ORTHO05D005020 4.6e-117 425.2 342 61.4
VMungo0720G1438 Vigna mungo HOM05D004272 ORTHO05D005020 4.6e-117 425.2 326 62.6
Aa31LG4G8760 Aethionema arabicum HOM05D004272 ORTHO05D005020 2.3e-116 422.9 339 61.4
Glyma.20G173700 Glycine max HOM05D004272 ORTHO05D005020 3.0e-116 422.5 335 62.4
arahy.Tifrunner.gnm1.ann1.6Q1IL7 Arachis hypogaea HOM05D004272 ORTHO05D005020 6.6e-116 421.4 338 62.1
Thhalv10018624m.g Eutrema salsugineum HOM05D004272 ORTHO05D005020 6.6e-116 421.4 337 61.7
arahy.Tifrunner.gnm1.ann1.CBRY2G Arachis hypogaea HOM05D004272 ORTHO05D005020 8.6e-116 421.0 341 61.6
C06p45930 Brassica napus HOM05D004272 ORTHO05D005020 8.6e-116 421.0 326 64.4
BcaC08g46620 Brassica carinata HOM05D004272 ORTHO05D005020 1.1e-115 420.6 326 64.1
BolC6t39646H Brassica oleracea HOM05D004272 ORTHO05D005020 1.1e-115 420.6 326 64.1
Glyma.10G218100 Glycine max HOM05D004272 ORTHO05D005020 1.9e-115 419.9 334 62.3
FAN20G0830 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.3e-115 418.7 317 64.7
BcaC08g46618 Brassica carinata HOM05D004272 ORTHO05D005020 7.3e-115 417.9 341 62.8
FvH4_2g12360 Fragaria vesca HOM05D004272 ORTHO05D005020 7.3e-115 417.9 317 64.0
FAN24G2414 Fragaria x ananassa HOM05D004272 ORTHO05D005020 7.3e-115 417.9 317 64.0
Oeu030010.1 Olea europaea HOM05D004272 ORTHO05D005020 7.3e-115 417.9 337 63.5
TAR381G1009 Trochodendron aralioides HOM05D004272 ORTHO05D005020 7.3e-115 417.9 329 66.3
Peaxi162Scf00268g01426 Petunia axillaris HOM05D004272 ORTHO05D005020 1.6e-114 416.8 335 63.0
Atru.chr13.1851 Acer truncatum HOM05D004272 ORTHO05D005020 2.1e-114 416.4 374 59.9
Oeu004773.1 Olea europaea HOM05D004272 ORTHO05D005020 2.1e-114 416.4 352 62.8
MELO3C018159.2 Cucumis melo HOM05D004272 ORTHO05D005020 2.8e-114 416.0 335 62.1
AL2G31440 Arabidopsis lyrata HOM05D004272 ORTHO05D005020 4.7e-114 415.2 319 63.3
AT1G71860 Arabidopsis thaliana HOM05D004272 ORTHO05D005020 6.2e-114 414.8 319 63.3
BraA07t31367Z Brassica rapa HOM05D004272 ORTHO05D005020 6.2e-114 414.8 323 63.8
Lalb_Chr06g0161911 Lupinus albus HOM05D004272 ORTHO05D005020 8.1e-114 414.5 323 62.5
A07p38020 Brassica napus HOM05D004272 ORTHO05D005020 1.1e-113 414.1 323 63.5
Haze_17897 Corylus avellana HOM05D004272 ORTHO05D005020 1.8e-113 413.3 394 55.8
Lj5g0022070 Lotus japonicus HOM05D004272 ORTHO05D005020 1.8e-113 413.3 335 63.9
Nitab4.5_0006059g0040 Nicotiana tabacum HOM05D004272 ORTHO05D005020 1.8e-113 413.3 325 63.1
FAN27G2909 Fragaria x ananassa HOM05D004272 ORTHO05D005020 2.3e-113 412.9 328 63.1
Migut.N03339 Erythranthe guttata HOM05D004272 ORTHO05D005020 8.9e-113 411.0 310 66.1
Sed0022323 Sechium edule HOM05D004272 ORTHO05D005020 1.2e-112 410.6 332 63.0
Rhsim11G0061700 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.5e-112 410.2 365 58.9
Rhsim11G0063200 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.5e-112 410.2 365 58.9
Solyc11g016990.3 Solanum lycopersicum HOM05D004272 ORTHO05D005020 7.5e-112 407.9 335 63.3
Sopen11g008950 Solanum pennellii HOM05D004272 ORTHO05D005020 2.2e-111 406.4 331 63.7
Hma1.2p1_0510F.1_g168790 Hydrangea macrophylla HOM05D004272 ORTHO05D005020 1.1e-110 404.1 316 65.2
SalBow6G4901 Salvia bowleyana HOM05D004272 ORTHO05D005020 1.1e-110 404.1 330 61.5
Sopen06g023970 Solanum pennellii HOM05D004272 ORTHO05D005020 1.1e-110 404.1 336 62.2
Actinidia02597 Actinidia chinensis HOM05D004272 ORTHO05D005020 1.4e-110 403.7 337 62.6
CsaV3_7G024250 Cucumis sativus L. HOM05D004272 ORTHO05D005020 1.4e-110 403.7 312 63.5
Solyc06g065480.4 Solanum lycopersicum HOM05D004272 ORTHO05D005020 1.9e-110 403.3 336 62.2
ATR0687G002 Amborella trichopoda HOM05D004272 ORTHO05D005020 5.4e-110 401.7 334 60.8
MD05G1039700 Malus domestica HOM05D004272 ORTHO05D005020 1.6e-109 400.2 318 64.2
Duzib116G0407 Durio zibethinus HOM05D004272 ORTHO05D005020 6.0e-109 398.3 381 55.1
SalBow6G0059 Salvia bowleyana HOM05D004272 ORTHO05D005020 7.8e-109 397.9 330 61.5
Sc01g0001660 Simmondsia chinensis HOM05D004272 ORTHO05D005020 3.9e-108 395.6 320 61.9
Rhsim06G0099300 Rhododendron simsii HOM05D004272 ORTHO05D005020 4.3e-107 392.1 377 55.2
HPP92_003132 Vanilla planifolia HOM05D004272 ORTHO05D005020 1.1e-105 387.5 345 58.3
CARHR289070 Cardamine hirsuta HOM05D004272 ORTHO05D005020 8.9e-105 384.4 262 68.7
Lsat_1_v5_gn_5_157280 Lactuca sativa HOM05D004272 ORTHO05D005020 2.2e-103 379.8 322 60.6
HanXRQChr13g0388201 Helianthus annuus HOM05D004272 ORTHO05D005020 3.8e-103 379.0 322 61.2
CAN.G199.25 Capsicum annuum HOM05D004272 ORTHO05D005020 6.4e-103 378.3 271 68.3
Migut.C01228 Erythranthe guttata HOM05D004272 ORTHO05D005020 5.4e-102 375.2 336 58.6
Nitab4.5_0000159g0070 Nicotiana tabacum HOM05D004272 ORTHO05D005020 1.3e-100 370.5 277 67.1
DCAR_010068 Daucus carota HOM05D004272 ORTHO05D005020 6.6e-100 368.2 322 59.6
Hund27072 Selenicereus undatus HOM05D004272 ORTHO05D005020 1.5e-99 367.1 336 57.4
EL10Ac1g00062 Beta vulgaris HOM05D004272 ORTHO05D005020 1.2e-98 364.0 316 57.6
ClCG09G010370 Citrullus lanatus HOM05D004272 ORTHO05D005020 6.2e-98 361.7 300 61.0
AUR62004668 Chenopodium quinoa HOM05D004272 ORTHO05D005020 3.4e-96 355.9 261 65.5
Nitab4.5_0003518g0050 Nicotiana tabacum HOM05D004272 ORTHO05D005020 3.4e-96 355.9 260 68.5
vmacro12508 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 3.4e-96 355.9 315 57.5
Lj7C302G8 Lonicera japonica HOM05D004272 ORTHO05D005020 7.6e-96 354.8 381 52.2
unitig_61.g26072 Utricularia gibba HOM05D004272 ORTHO05D005020 7.6e-96 354.8 334 54.2
Nn5g27830 Nelumbo nucifera HOM05D004272 ORTHO05D005020 1.3e-95 354.0 349 53.9
TWI60G0092 Tripterygium wilfordii HOM05D004272 ORTHO05D005020 2.4e-94 349.7 333 56.2
Hund16809 Selenicereus undatus HOM05D004272 ORTHO05D005020 2.3e-92 343.2 319 55.5
SGA_v2.0_scaffold149G36610 Striga asiatica HOM05D004272 ORTHO05D005020 1.9e-91 340.1 380 50.0
RcHm_v2.0_Chr3g0456471 Rosa chinensis HOM05D004272 ORTHO05D005020 7.3e-91 338.2 321 56.1
RcHm_v2.0_Chr7g0181531 Rosa chinensis HOM05D004272 ORTHO05D005020 7.3e-91 338.2 315 56.5
Manes.02G190000 Manihot esculenta HOM05D004272 ORTHO05D005020 2.8e-90 336.3 209 73.7
AUR62023587 Chenopodium quinoa HOM05D004272 ORTHO05D005020 1.8e-89 333.6 251 64.1
CAN.G61.12 Capsicum annuum HOM05D004272 ORTHO05D005020 5.3e-89 332.0 245 66.1
FAN18G3209 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.5e-88 328.9 345 54.8
FAN08G2250 Fragaria x ananassa HOM05D004272 ORTHO05D005020 5.8e-88 328.6 315 56.2
FvH4_5g14850 Fragaria vesca HOM05D004272 ORTHO05D005020 9.9e-88 327.8 339 54.9
DCAR_014268 Daucus carota HOM05D004272 ORTHO05D005020 1.6e-85 320.5 354 51.7
Psat6g189360 Pisum sativum HOM05D004272 ORTHO05D005020 1.6e-85 320.5 259 61.8
FAN13G2363 Fragaria x ananassa HOM05D004272 ORTHO05D005020 1.8e-84 317.0 337 53.1
MELO3C023674.2 Cucumis melo HOM05D004272 ORTHO05D005020 6.7e-84 315.1 245 62.9
arahy.Tifrunner.gnm1.ann1.E3548W Arachis hypogaea HOM05D004272 ORTHO05D005020 5.6e-83 312.0 227 65.2
HanXRQChr13g0388211 Helianthus annuus HOM05D004272 ORTHO05D005020 2.9e-79 299.7 297 52.5
ECA248G3752 Erigeron canadensis HOM05D004272 ORTHO05D005020 3.8e-79 299.3 318 52.2
Hund16808 Selenicereus undatus HOM05D004272 ORTHO05D005020 5.5e-78 295.4 310 51.0
MD09G1287400 Malus domestica HOM05D004272 ORTHO05D005020 9.3e-78 294.7 347 49.6
vmacro00781 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 3.9e-76 289.3 399 43.6
Prupe.1G402600 Prunus persica HOM05D004272 ORTHO05D005020 6.7e-76 288.5 323 51.7
Nitab4.5_0029014g0010 Nicotiana tabacum HOM05D004272 ORTHO05D005020 1.1e-73 281.2 278 54.0
Ah.05g177840 Amaranthus hybridus HOM05D004272 ORTHO05D005020 3.1e-73 279.6 306 50.7
SHI09047 Sapria himalayana HOM05D004272 ORTHO05D005020 8.4e-71 271.6 259 54.1
Os12g0174800 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 1.3e-66 257.7 300 45.7
ECA248G0749 Erigeron canadensis HOM05D004272 ORTHO05D005020 2.2e-66 256.9 256 52.0
Pp3c13_6130 Physcomitrium patens HOM05D004272 ORTHO05D005020 2.8e-66 256.5 306 45.1
Mapoly0167s0026 Marchantia polymorpha HOM05D004272 ORTHO05D005020 5.9e-64 248.8 342 43.3
Pp3c3_2290 Physcomitrium patens HOM05D004272 ORTHO05D005020 2.5e-62 243.4 304 45.1
SMO347G0125 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 1.0e-60 238.0 302 44.7
Os11g0180200 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 5.9e-56 222.2 243 52.7
SGA_v2.0_scaffold483G52343 Striga asiatica HOM05D004272 ORTHO05D005020 2.2e-55 220.3 147 68.7
AagrBONN_evm.TU.Sc2ySwM_228.1486 Anthoceros agrestis HOM05D004272 ORTHO05D005020 2.7e-53 213.4 260 40.4
Potri.019G086001 Populus trichocarpa HOM05D004272 ORTHO05D005020 1.0e-52 211.5 134 70.9
CDE12G0366 Ceratophyllum demersum HOM05D004272 ORTHO05D005020 1.8e-49 200.7 279 41.9
Cre12.g524450 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 4.1e-49 199.5 303 39.9
SEGI_33079 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 9.1e-49 198.4 161 59.0
Zm00001eb091350 Zea mays HOM05D004272 ORTHO05D005020 2.6e-48 196.8 333 41.1
CBR_g17924 Chara braunii HOM05D004272 ORTHO05D005020 1.4e-46 191.0 206 45.6
Dinv41680 Davidia involucrata HOM05D004272 ORTHO05D005020 1.9e-46 190.7 112 77.7
PGSC0003DMG400024543 Solanum tuberosum HOM05D004272 ORTHO05D005020 3.6e-45 186.4 151 60.3
Zm00001eb138930 Zea mays HOM05D004272 ORTHO05D005020 4.4e-43 179.5 247 41.3
CBR_g49956 Chara braunii HOM05D004272 ORTHO05D005020 6.1e-37 159.1 223 41.3
TPR.G15698 Trifolium pratense HOM05D004272 ORTHO05D005020 1.8e-33 147.5 90 74.4
Haze_26549 Corylus avellana HOM05D004272 ORTHO05D005020 3.1e-33 146.7 260 35.0
Haze_26606 Corylus avellana HOM05D004272 ORTHO05D005020 4.5e-32 142.9 280 34.3
PSO170G3665 Papaver somniferum HOM05D004272 ORTHO05D005020 5.2e-28 129.4 212 40.1
SMO166G0076 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 7.5e-27 125.6 267 31.8
SMO119G0089 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 8.3e-26 122.1 231 34.6
SEGI_21150 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 2.0e-24 117.5 94 59.6
Cre09.g389949 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 5.9e-24 115.9 363 28.7
SMO351G0156 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 1.3e-23 114.8 158 45.6
PRCOL_00003935 Prasinoderma coloniale HOM05D004272 ORTHO05D005020 1.1e-22 111.7 307 29.3
SMO115G0188 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 5.5e-22 109.4 301 30.6
CBR_g53623 Chara braunii HOM05D004272 ORTHO05D005020 6.1e-21 105.9 109 40.4
CBR_g53619 Chara braunii HOM05D004272 ORTHO05D005020 1.0e-20 105.1 115 40.9
SGA_v2.0_scaffold1053G53812 Striga asiatica HOM05D004272 ORTHO05D005020 4.0e-20 103.2 68 70.6
SGA_v2.0_scaffold322G48619 Striga asiatica HOM05D004272 ORTHO05D005020 4.0e-20 103.2 68 70.6
SGA_v2.0_scaffold386G50488 Striga asiatica HOM05D004272 ORTHO05D005020 8.9e-20 102.1 68 69.1
Cfa026335 Carpinus fangiana HOM05D003314 ORTHO05D004164 2.0e-19 100.9 261 29.1
Cfa022797 Carpinus fangiana HOM05D004272 ORTHO05D005020 5.4e-17 92.8 291 26.8
Glyma.20G173900 Glycine max HOM05D004272 ORTHO05D005020 5.0e-15 86.3 60 68.3
Psat6g014560 Pisum sativum HOM05D004272 ORTHO05D005020 8.9e-12 75.5 80 50.0
Glyma.20G173800 Glycine max HOM05D004272 ORTHO05D005020 9.2e-09 65.5 130 40.0
CARHR290880 Cardamine hirsuta HOM05D004272 ORTHO05D005020 1.2e-08 65.1 78 50.0


User provided reference genes

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