Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2249 Papaver somniferum HOM05D007919 ORTHO05D006738 5.1e-102 374.4 186 100.0
PSO339G5584 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-59 232.6 160 72.5
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 4.1e-59 231.9 180 63.3
PSO170G1038 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-58 229.9 180 62.2
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-55 220.3 186 60.8
PSO063G3665 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-55 219.5 181 60.2
PSO170G4707 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-55 219.2 181 58.6
PSO017G1384 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-46 188.7 169 53.8
PSO210G2580 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-45 185.7 135 67.4
PSO210G3055 Papaver somniferum HOM05D007919 ORTHO05D006738 4.4e-45 185.3 169 53.8
PSO161G0093 Papaver somniferum HOM05D007919 ORTHO05D006738 9.7e-45 184.1 163 57.1
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 8.2e-44 181.0 159 55.3
PSO782G3402 Papaver somniferum HOM05D007919 ORTHO05D006738 3.1e-43 179.1 186 49.5
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-42 177.2 179 48.6
PSO675G7368 Papaver somniferum HOM05D007919 ORTHO05D006738 4.5e-42 175.3 179 48.0
PSO017G4699 Papaver somniferum HOM05D007919 ORTHO05D006738 4.2e-40 168.7 179 46.4
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 9.1e-35 151.0 153 47.7
PSO478G2225 Papaver somniferum HOM05D007919 ORTHO05D006738 5.0e-33 145.2 155 45.8
PSO541G3792 Papaver somniferum HOM05D007919 ORTHO05D006738 5.5e-32 141.7 180 45.6
PSO170G5626 Papaver somniferum HOM05D007919 ORTHO05D006738 5.7e-29 131.7 120 55.8
PSO384G0027 Papaver somniferum HOM05D007919 ORTHO05D006738 6.3e-28 128.3 90 70.0
PSO210G4929 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-27 126.7 110 58.2
PSO724G1229 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-27 126.3 143 42.7
PSO339G6096 Papaver somniferum HOM05D007919 ORTHO05D006738 5.9e-26 121.7 150 44.7
PSO832G0011 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-23 114.0 96 51.0
PSO675G0578 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-23 113.2 125 46.4
PSO017G1601 Papaver somniferum HOM05D007919 ORTHO05D006738 1.0e-22 110.9 108 52.8
PSO210G3676 Papaver somniferum HOM05D000003 ORTHO05D006738 1.4e-22 110.5 98 57.1
PSO478G0556 Papaver somniferum HOM05D007919 ORTHO05D006738 3.4e-21 105.9 106 48.1
PSO339G2937 Papaver somniferum HOM05D007919 ORTHO05D006738 9.2e-19 97.8 80 58.8
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 4.5e-18 95.5 157 36.3
PSO210G4402 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-17 93.6 123 42.3
PSO675G5235 Papaver somniferum HOM05D029977 ORTHO05D006738 5.0e-17 92.0 164 31.1
PSO832G2737 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-16 89.4 157 30.6
PSO832G2095 Papaver somniferum HOM05D007919 ORTHO05D006738 5.6e-16 88.6 84 52.4
PSO384G1061 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-15 87.0 154 33.1
PSO541G0088 Papaver somniferum HOM05D029977 ORTHO05D006738 1.6e-15 87.0 160 31.2
PSO478G4994 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-15 86.7 182 34.1
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 4.7e-15 85.5 162 34.0
PSO478G1611 Papaver somniferum HOM05D007919 ORTHO05D006738 3.1e-14 82.8 103 44.7
PSO675G2249 Papaver somniferum HOM05D007919 ORTHO05D006738 8.9e-14 81.3 156 35.3
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 1.2e-13 80.9 158 31.6
PSO528G0097 Papaver somniferum HOM05D007919 ORTHO05D006738 5.8e-13 78.6 162 33.3
PSO478G2359 Papaver somniferum HOM05D007919 ORTHO05D006738 9.8e-13 77.8 154 33.1
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 9.8e-13 77.8 151 31.8
QL12p001891 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-12 77.4 182 31.9
Duzib170G1100 Durio zibethinus HOM05D000003 ORTHO05D000167 2.9e-12 76.3 156 29.5
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-12 75.9 157 29.3
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 8.3e-12 74.7 155 31.6
PSO210G4902 Papaver somniferum HOM05D003407 ORTHO05D001026 1.1e-11 74.3 178 26.4
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 1.1e-11 74.3 141 32.6
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-11 73.9 176 27.3
FvH4_2g34753 Fragaria vesca HOM05D000003 ORTHO05D014221 1.9e-11 73.6 170 25.9
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 1.9e-11 73.6 150 31.3
PSO478G3405 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-11 73.2 163 33.1
Aqoxy4G01593 Aquilegia oxysepala HOM05D000003 ORTHO05D018399 3.2e-11 72.8 143 34.3
PSO017G0823 Papaver somniferum HOM05D003407 ORTHO05D001026 4.1e-11 72.4 159 28.3
PSO724G0332 Papaver somniferum HOM05D008740 ORTHO05D006738 4.1e-11 72.4 152 30.9
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 7.0e-11 71.6 179 27.4
SEGI_21104 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 9.2e-11 71.2 136 37.5
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 1.2e-10 70.9 158 31.6
PSO210G1914 Papaver somniferum HOM05D003407 ORTHO05D001026 1.2e-10 70.9 176 25.6
QL02p065736 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-10 70.9 179 30.7
EL10Ac8g20356 Beta vulgaris HOM05D004408 ORTHO05D000006 1.6e-10 70.5 165 33.3
PSO339G2402 Papaver somniferum HOM05D007919 ORTHO05D006738 2.0e-10 70.1 62 56.5
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 2.7e-10 69.7 137 32.8
Gorai.009G352100 Gossypium raimondii HOM05D008766 ORTHO05D010886 2.7e-10 69.7 146 36.3
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 2.7e-10 69.7 159 28.9
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.5e-10 69.3 168 27.4
FvH4_5g26254 Fragaria vesca HOM05D011824 ORTHO05D009449 4.6e-10 68.9 159 28.9
PSO081G0063 Papaver somniferum HOM05D003407 ORTHO05D001026 6.0e-10 68.6 142 32.4
PSO675G5848 Papaver somniferum HOM05D003407 ORTHO05D001026 1.0e-09 67.8 164 26.2
RcHm_v2.0_Chr7g0227851 Rosa chinensis HOM05D008833 ORTHO05D000167 1.0e-09 67.8 161 29.2
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 1.7e-09 67.0 158 31.0
PSO478G4658 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-09 67.0 147 30.6
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.3e-09 66.6 168 27.4
PSO170G1593 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-09 66.6 134 29.1
PSO541G4887 Papaver somniferum HOM05D007919 ORTHO05D006738 3.0e-09 66.2 158 31.6
CANSAT21G1566 Cannabis sativa HOM05D000003 ORTHO05D009135 5.0e-09 65.5 129 34.1
PSO063G1305 Papaver somniferum HOM05D003407 ORTHO05D001026 5.0e-09 65.5 175 24.6
PSO384G0598 Papaver somniferum HOM05D008740 ORTHO05D006738 5.0e-09 65.5 142 32.4
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-09 65.5 164 29.9
AUR62030077 Chenopodium quinoa HOM05D000003 ORTHO05D000004 6.6e-09 65.1 172 30.2
Duzib160G0264 Durio zibethinus HOM05D000003 ORTHO05D000167 6.6e-09 65.1 144 30.6
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 6.6e-09 65.1 145 29.7
PSO447G0188 Papaver somniferum HOM05D003407 ORTHO05D001026 6.6e-09 65.1 172 28.5
MD13G1019000 Malus domestica HOM05D000155 ORTHO05D000022 8.6e-09 64.7 160 32.5
PSO339G3423 Papaver somniferum HOM05D000003 ORTHO05D001026 8.6e-09 64.7 140 30.7
PSO675G5608 Papaver somniferum HOM05D007919 ORTHO05D006738 8.6e-09 64.7 181 27.1
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 8.6e-09 64.7 165 35.2
Duzib147G1660 Durio zibethinus HOM05D000003 ORTHO05D000167 1.1e-08 64.3 160 28.1
FvH4_4g05481 Fragaria vesca HOM05D008133 ORTHO05D009449 1.5e-08 63.9 155 28.4
FvH4_4g20431 Fragaria vesca HOM05D011624 ORTHO05D014221 1.5e-08 63.9 160 30.6
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.5e-08 63.9 161 31.7
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-08 63.5 163 28.8
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-08 63.5 162 29.6
PSO170G5434 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-08 63.2 159 30.2
PSO210G4018 Papaver somniferum HOM05D003407 ORTHO05D001026 2.5e-08 63.2 158 29.7
MD02G1050700 Malus domestica HOM05D000155 ORTHO05D000022 3.3e-08 62.8 161 31.1
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.3e-08 62.8 159 30.8
FvH4_3g43651 Fragaria vesca HOM05D008133 ORTHO05D009449 4.3e-08 62.4 156 28.2
FvH4_6g11620 Fragaria vesca HOM05D008133 ORTHO05D009449 4.3e-08 62.4 160 26.2
Gorai.004G088300 Gossypium raimondii HOM05D008766 ORTHO05D010886 4.3e-08 62.4 165 29.7
AUR62027518 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.6e-08 62.0 169 29.0
PSO210G5051 Papaver somniferum HOM05D000003 ORTHO05D001026 5.6e-08 62.0 136 29.4
PSO339G4411 Papaver somniferum HOM05D003407 ORTHO05D001026 5.6e-08 62.0 160 26.9
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-08 61.6 159 29.6
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 7.3e-08 61.6 177 26.6
Eucgr.B03923 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.3e-08 61.6 151 34.4
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 7.3e-08 61.6 147 29.9
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.3e-08 61.6 164 30.5
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 9.5e-08 61.2 151 28.5
EL10Ac2g03044 Beta vulgaris HOM05D000003 ORTHO05D000006 9.5e-08 61.2 166 31.9
CANSAT11G1930 Cannabis sativa HOM05D000003 ORTHO05D009135 9.5e-08 61.2 137 30.7
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 9.5e-08 61.2 162 30.9
PSO017G1699 Papaver somniferum HOM05D000003 ORTHO05D001026 9.5e-08 61.2 163 27.6
PSO675G1658 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-08 61.2 172 27.9
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 9.5e-08 61.2 163 29.4
Prupe.2G216600 Prunus persica HOM05D008133 ORTHO05D009449 9.5e-08 61.2 159 27.0
Aqoxy7G02027 Aquilegia oxysepala HOM05D000003 ORTHO05D018399 1.2e-07 60.8 111 33.3
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-07 60.8 145 31.0
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 1.2e-07 60.8 167 31.1
FvH4_4g25931 Fragaria vesca HOM05D011624 ORTHO05D014221 1.6e-07 60.5 134 26.9
PSO017G6133 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-07 60.5 155 29.0
Prupe.6G204400 Prunus persica HOM05D000003 ORTHO05D015270 1.6e-07 60.5 163 25.8
EL10As6g23653 Beta vulgaris HOM05D000003 ORTHO05D000167 2.1e-07 60.1 183 25.1
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 2.1e-07 60.1 144 28.5
Nitab4.5_0000188g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-07 60.1 153 27.5
PSO591G0286 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-07 60.1 165 26.7
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.8e-07 59.7 157 31.2
Haze_18012 Corylus avellana HOM05D022711 ORTHO05D000167 2.8e-07 59.7 133 31.6
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 3.6e-07 59.3 159 27.0
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 3.6e-07 59.3 153 28.1
PSO017G3479 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-07 58.9 130 29.2
TAR628G0770 Trochodendron aralioides HOM05D009417 ORTHO05D011990 4.7e-07 58.9 137 29.9
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 6.2e-07 58.5 159 27.0
FAN20G0393 Fragaria x ananassa HOM05D011624 ORTHO05D014221 6.2e-07 58.5 126 31.0
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 8.0e-07 58.2 157 30.6
PSO170G2459 Papaver somniferum HOM05D000003 ORTHO05D001026 8.0e-07 58.2 170 27.6
TWI12G0881 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 8.0e-07 58.2 90 38.9
Atru.chr5.2789 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.8 184 28.3
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-06 57.8 129 31.0
AUR62039323 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.1e-06 57.8 176 29.5
PSO339G4645 Papaver somniferum HOM05D003407 ORTHO05D001026 1.1e-06 57.8 171 24.6
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-06 57.8 140 28.6
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.1e-06 57.8 165 29.7
FvH4_2g13151 Fragaria vesca HOM05D006281 ORTHO05D005138 1.4e-06 57.4 93 34.4
PSO675G2397 Papaver somniferum HOM05D000003 ORTHO05D001026 1.4e-06 57.4 142 26.8
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 1.8e-06 57.0 157 27.4
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 2.3e-06 56.6 133 30.8
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-06 56.6 162 27.8
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-06 56.6 162 27.2
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-06 56.6 162 27.2
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-06 56.2 162 28.4
CANSAT01G1851 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-06 56.2 135 31.9
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 3.1e-06 56.2 143 30.8
QL03p029332 Quercus lobata HOM05D000003 ORTHO05D000167 3.1e-06 56.2 123 33.3
TWI73G0025 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 3.1e-06 56.2 143 27.3
Lj3g0008362 Lotus japonicus HOM05D000003 ORTHO05D000004 4.0e-06 55.8 163 28.2
CANSAT64G1247 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-06 55.5 159 24.5
PSO170G5422 Papaver somniferum HOM05D007919 ORTHO05D006738 5.2e-06 55.5 97 38.1
SEGI_40390 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 5.2e-06 55.5 148 29.7
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-06 55.1 145 31.7
EL10Ac2g02831 Beta vulgaris HOM05D000003 ORTHO05D000167 6.8e-06 55.1 156 28.8
CANSAT25G0817 Cannabis sativa HOM05D000003 ORTHO05D009135 6.8e-06 55.1 132 28.0
PSO210G7233 Papaver somniferum HOM05D007919 ORTHO05D006738 6.8e-06 55.1 139 26.6
PSO782G4220 Papaver somniferum HOM05D000003 ORTHO05D000004 6.8e-06 55.1 126 32.5
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 6.8e-06 55.1 164 27.4
SEGI_01428 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 6.8e-06 55.1 141 27.0
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.8e-06 55.1 162 27.2
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 8.9e-06 54.7 151 29.1
Nitab4.5_0000258g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.9e-06 54.7 153 24.8
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 8.9e-06 54.7 136 30.1


User provided reference genes

Program Settings