Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2187 Papaver somniferum HOM05D002970 ORTHO05D007037 1.0e-225 786.6 455 100.0
PSO063G6630 Papaver somniferum HOM05D002970 ORTHO05D007037 6.4e-207 724.2 455 89.2
PSO013G0304 Papaver somniferum HOM05D002970 ORTHO05D007037 5.1e-204 714.5 455 87.0
PSO063G0226 Papaver somniferum HOM05D002970 ORTHO05D007037 1.1e-203 713.4 455 86.6
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.4e-97 360.9 468 46.6
MBI11_g22624_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D007037 1.3e-87 327.8 468 43.4
Dinv14772 Davidia involucrata HOM05D002970 ORTHO05D007037 1.7e-87 327.4 468 47.4
Dinv11020 Davidia involucrata HOM05D002970 ORTHO05D007037 1.5e-86 324.3 468 44.4
GSVIVG01010295001 Vitis vinifera HOM05D002970 ORTHO05D007037 2.6e-83 313.5 465 42.8
Aqoxy5G03607 Aquilegia oxysepala HOM05D002970 ORTHO05D007037 1.3e-82 311.2 470 44.5
QL03p055853 Quercus lobata HOM05D002970 ORTHO05D007037 2.1e-80 303.9 468 43.8
Duzib268G0312 Durio zibethinus HOM05D002970 ORTHO05D007037 1.1e-76 291.6 467 40.9
Actinidia08107 Actinidia chinensis HOM05D002970 ORTHO05D007037 6.9e-76 288.9 468 40.6
Actinidia30694 Actinidia chinensis HOM05D002970 ORTHO05D007037 5.8e-75 285.8 468 40.8
Thecc.02G269400 Theobroma cacao HOM05D002970 ORTHO05D007037 4.9e-74 282.7 467 40.0
Rhsim12G0037200 Rhododendron simsii HOM05D002970 ORTHO05D007037 1.1e-73 281.6 457 38.9
RcHm_v2.0_Chr4g0431991 Rosa chinensis HOM05D002970 ORTHO05D007037 2.4e-73 280.4 468 39.3
vmacro01100 Vaccinium macrocarpon HOM05D002970 ORTHO05D007037 1.2e-72 278.1 457 41.1
Duzib251G0656 Durio zibethinus HOM05D002970 ORTHO05D007037 2.1e-72 277.3 467 40.5
CiPaw.05G175500 Carya illinoinensis HOM05D002970 ORTHO05D007037 1.7e-71 274.2 471 39.1
Gohir.A03G130800 Gossypium hirsutum HOM05D002970 ORTHO05D007037 3.9e-71 273.1 467 40.3
FAN07G0847 Fragaria x ananassa HOM05D002970 ORTHO05D007037 6.6e-71 272.3 468 38.5
Gorai.005G173600 Gossypium raimondii HOM05D002970 ORTHO05D007037 8.7e-71 271.9 467 40.3
TWI36G0141 Tripterygium wilfordii HOM05D002970 ORTHO05D007037 2.5e-70 270.4 468 37.0
Gohir.D02G154501 Gossypium hirsutum HOM05D002970 ORTHO05D007037 5.6e-70 269.2 467 39.8
FvH4_4g24950 Fragaria vesca HOM05D002970 ORTHO05D007037 3.6e-69 266.5 468 38.0
FAN22G0223 Fragaria x ananassa HOM05D002970 ORTHO05D007037 4.8e-69 266.2 468 38.0
Manes.12G018200 Manihot esculenta HOM05D002970 ORTHO05D007037 2.6e-67 260.4 471 36.5
MD16G1107700 Malus domestica HOM05D002970 ORTHO05D007037 1.4e-65 254.6 468 40.8
Prupe.1G238600 Prunus persica HOM05D002970 ORTHO05D007037 1.9e-65 254.2 502 38.2
PSO478G2615 Papaver somniferum HOM05D002970 ORTHO05D007037 5.4e-65 252.7 343 51.0
Ciclev10030479m.g Citrus clementina HOM05D002970 ORTHO05D007037 1.6e-64 251.1 470 38.7
Potri.010G052600 Populus trichocarpa HOM05D002970 ORTHO05D007037 1.6e-64 251.1 469 38.0
Ca_25118_v3 Cicer arietinum L. HOM05D002970 ORTHO05D007037 1.9e-62 244.2 457 37.4
MELO3C011904.2 Cucumis melo HOM05D002970 ORTHO05D007037 5.6e-62 242.7 469 39.9
Sabra10G0017800 Salix brachista HOM05D002970 ORTHO05D007037 1.3e-61 241.5 469 37.1
Cpa.g.sc86.7 Carica papaya HOM05D002970 ORTHO05D007037 1.6e-61 241.1 469 37.7
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.6e-61 241.1 466 36.9
FAN12G3366 Fragaria x ananassa HOM05D002970 ORTHO05D007037 1.6e-61 241.1 432 36.6
Lj3A1063T61 Lonicera japonica HOM05D002970 ORTHO05D007037 4.8e-61 239.6 456 37.9
Lj6g0025430 Lotus japonicus HOM05D002970 ORTHO05D007037 6.2e-61 239.2 456 35.7
CANSAT01G0097 Cannabis sativa HOM05D002970 ORTHO05D007037 1.4e-60 238.0 468 36.5
MD13G1107800 Malus domestica HOM05D002970 ORTHO05D007037 5.3e-60 236.1 467 37.9
PSO063G1172 Papaver somniferum HOM05D002970 ORTHO05D007037 3.4e-59 233.4 129 98.4
Glyma.18G011200 Glycine max HOM05D002970 ORTHO05D007037 1.3e-58 231.5 456 36.0
Glyma.11G246000 Glycine max HOM05D002970 ORTHO05D007037 1.7e-58 231.1 455 36.0
PGR119G0825 Punica granatum HOM05D002970 ORTHO05D007037 6.4e-58 229.2 460 38.3
Medtr3g086150 Medicago truncatula HOM05D002970 ORTHO05D007037 1.9e-57 227.6 457 34.1
Sed0018065 Sechium edule HOM05D002970 ORTHO05D007037 2.5e-57 227.3 469 33.3
Nitab4.5_0000041g0280 Nicotiana tabacum HOM05D002970 ORTHO05D007037 4.2e-57 226.5 467 34.5
Phvul.001G257700 Phaseolus vulgaris HOM05D002970 ORTHO05D007037 7.1e-57 225.7 456 34.9
Nitab4.5_0007823g0020 Nicotiana tabacum HOM05D002970 ORTHO05D007037 1.0e-55 221.9 467 34.0
CAN.G49.7 Capsicum annuum HOM05D002970 ORTHO05D007037 9.6e-54 215.3 466 33.0
TPR.G14240 Trifolium pratense HOM05D002970 ORTHO05D007037 2.4e-52 210.7 471 32.9
Sed0022070 Sechium edule HOM05D002970 ORTHO05D007037 3.1e-52 210.3 479 32.8
CsaV3_5G030650 Cucumis sativus L. HOM05D002970 ORTHO05D007037 9.0e-52 208.8 469 36.9
Solyc05g014200.3 Solanum lycopersicum HOM05D002970 ORTHO05D007037 1.3e-50 204.9 467 36.2
THA.LOC104825534 Tarenaya hassleriana HOM05D002970 ORTHO05D007037 1.3e-50 204.9 468 34.2
Rhsim12G0037500 Rhododendron simsii HOM05D002970 ORTHO05D001380 1.7e-50 204.5 321 38.6
Gorai.002G190100 Gossypium raimondii HOM05D002970 ORTHO05D007037 2.9e-50 203.8 362 39.5
Carub.0001s2565 Capsella rubella HOM05D002970 ORTHO05D007037 3.8e-50 203.4 459 34.4
Gohir.D01G153501 Gossypium hirsutum HOM05D002970 ORTHO05D007037 8.4e-50 202.2 310 41.9
AL1G40480 Arabidopsis lyrata HOM05D002970 ORTHO05D007037 5.5e-49 199.5 457 33.3
A09p38780 Brassica napus HOM05D002970 ORTHO05D007037 9.3e-49 198.7 457 33.7
BraA09t39386Z Brassica rapa HOM05D002970 ORTHO05D007037 1.6e-48 198.0 457 33.5
Cc11_g16290 Coffea canephora HOM05D002970 ORTHO05D007037 1.6e-48 198.0 464 31.7
Sopen05g009230 Solanum pennellii HOM05D002970 ORTHO05D007037 4.6e-48 196.4 467 35.8
BcaC05g26716 Brassica carinata HOM05D002970 ORTHO05D007037 1.0e-47 195.3 457 33.7
VMungo1383G0211 Vigna mungo HOM05D002970 ORTHO05D007037 1.8e-47 194.5 461 33.0
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 2.3e-47 194.1 469 32.6
Sp1g23340 Schrenkiella parvula HOM05D002970 ORTHO05D007037 3.0e-47 193.7 459 32.5
Sc11g0000790 Simmondsia chinensis HOM05D002970 ORTHO05D007037 3.0e-47 193.7 505 30.7
C05p25820 Brassica napus HOM05D002970 ORTHO05D007037 4.3e-46 189.9 457 35.2
BolC5t31302H Brassica oleracea HOM05D002970 ORTHO05D007037 5.7e-46 189.5 457 35.0
Thhalv10006539m.g Eutrema salsugineum HOM05D002970 ORTHO05D007037 9.7e-46 188.7 460 33.7
Eucgr.H04698 Eucalyptus grandis HOM05D002970 ORTHO05D007037 2.8e-45 187.2 552 29.0
Psat5g093520 Pisum sativum HOM05D002970 ORTHO05D007037 2.8e-45 187.2 458 31.2
BcaB03g12058 Brassica carinata HOM05D002970 ORTHO05D007037 3.7e-45 186.8 457 35.9
Aa31LG4G12160 Aethionema arabicum HOM05D002970 ORTHO05D007037 6.3e-45 186.0 520 32.1
arahy.Tifrunner.gnm1.ann1.9A7Q93 Arachis hypogaea HOM05D002970 ORTHO05D007037 6.9e-44 182.6 269 40.9
arahy.Tifrunner.gnm1.ann1.CS70SB Arachis hypogaea HOM05D002970 ORTHO05D007037 1.5e-43 181.4 269 40.9
CDE09G0990 Ceratophyllum demersum HOM05D002970 ORTHO05D007037 2.0e-43 181.0 465 32.9
Lalb_Chr23g0277811 Lupinus albus HOM05D002970 ORTHO05D007037 2.0e-43 181.0 594 30.3
BcaC05g26719 Brassica carinata HOM05D002970 ORTHO05D007037 4.5e-43 179.9 460 34.8
AT1G24460 Arabidopsis thaliana HOM05D002970 ORTHO05D007037 7.7e-43 179.1 458 32.3
BcaC05g26524 Brassica carinata HOM05D002970 ORTHO05D007037 6.5e-42 176.0 460 35.4
MSTRG.540 Avicennia marina HOM05D002970 ORTHO05D007037 2.5e-41 174.1 466 31.1
CARHR026670 Cardamine hirsuta HOM05D002970 ORTHO05D007037 3.2e-41 173.7 456 34.4
Peaxi162Scf00128g00725 Petunia axillaris HOM05D002970 ORTHO05D007037 1.2e-40 171.8 509 32.4
BraA08t34608Z Brassica rapa HOM05D002970 ORTHO05D007037 4.6e-40 169.9 457 31.9
C03p73460 Brassica napus HOM05D002970 ORTHO05D007037 7.9e-40 169.1 458 31.9
A08p26560 Brassica napus HOM05D002970 ORTHO05D007037 2.3e-39 167.5 457 31.9
BolC3t19641H Brassica oleracea HOM05D002970 ORTHO05D007037 3.0e-39 167.2 457 31.9
Migut.K00673 Erythranthe guttata HOM05D002970 ORTHO05D007037 3.0e-39 167.2 470 29.8
DCAR_031175 Daucus carota HOM05D002970 ORTHO05D007037 5.1e-39 166.4 433 31.4
ECA246G5228 Erigeron canadensis HOM05D002970 ORTHO05D001380 5.1e-39 166.4 259 42.1
HPP92_009917 Vanilla planifolia HOM05D002970 ORTHO05D007037 3.3e-38 163.7 466 27.9
Zm00001eb246290 Zea mays HOM05D002970 ORTHO05D007037 4.3e-38 163.3 468 27.8
ClCG05G026190 Citrullus lanatus HOM05D002970 ORTHO05D007037 5.7e-38 162.9 469 33.5
Oeu049169.1 Olea europaea HOM05D002970 ORTHO05D007037 9.7e-38 162.2 349 34.1
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.9e-33 147.9 325 32.0
SGA_v2.0_scaffold100G29587 Striga asiatica HOM05D002970 ORTHO05D007037 2.1e-32 144.4 470 27.7
Ah.03g133670 Amaranthus hybridus HOM05D002970 ORTHO05D007037 8.8e-31 139.0 555 24.9
HanXRQChr12g0372101 Helianthus annuus HOM05D002970 ORTHO05D007037 1.1e-30 138.7 500 27.6
EL10Ac6g15185 Beta vulgaris HOM05D002970 ORTHO05D007037 3.3e-30 137.1 553 26.4
AUR62005543 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.3e-29 135.2 341 34.0
CDE02G2153 Ceratophyllum demersum HOM05D002970 ORTHO05D007037 7.7e-27 125.9 339 29.2
ECA233G2191 Erigeron canadensis HOM05D002970 ORTHO05D007037 1.1e-25 122.1 466 31.8
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 1.4e-25 121.7 145 50.3
Lsat_1_v5_gn_8_150420 Lactuca sativa HOM05D002970 ORTHO05D007037 2.5e-25 120.9 398 30.2
FAN12G1086 Fragaria x ananassa HOM05D002970 ORTHO05D007037 4.2e-25 120.2 142 48.6
EL10As2g23227 Beta vulgaris HOM05D002970 ORTHO05D007037 5.7e-22 109.8 330 29.1
unitig_749.g13283 Utricularia gibba HOM05D002970 ORTHO05D007037 2.7e-16 90.9 380 25.0
SEGI_37710 Sequoiadendron giganteum HOM05D005366 ORTHO05D006323 5.0e-10 70.1 492 24.0
Atru.chr11.2207 Acer truncatum HOM05D002970 ORTHO05D007037 9.4e-09 65.9 83 45.8
SalBow4G0033 Salvia bowleyana HOM05D005366 ORTHO05D006323 8.0e-08 62.8 478 22.6
Gohir.A01G156851 Gossypium hirsutum HOM05D002970 ORTHO05D007037 1.8e-07 61.6 128 37.5
ATR0580G390 Amborella trichopoda HOM05D005366 ORTHO05D006323 7.5e-06 56.2 488 21.7


User provided reference genes

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