Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 2.2e-67 258.8 133 100.0
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 4.8e-38 161.4 128 58.6
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.8e-37 159.5 130 58.5
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 7.0e-37 157.5 128 60.2
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 7.0e-37 157.5 128 57.0
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 9.1e-37 157.1 128 58.6
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 1.6e-36 156.4 130 56.9
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 2.6e-36 155.6 128 58.6
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 4.5e-36 154.8 130 56.9
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 5.9e-36 154.5 128 57.8
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 1.3e-35 153.3 130 56.2
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 1.3e-35 153.3 128 57.8
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 5.0e-35 151.4 130 54.6
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 4.2e-34 148.3 129 55.0
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 7.2e-34 147.5 128 54.7
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 2.1e-33 146.0 128 55.5
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 3.6e-33 145.2 130 52.3
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 4.7e-33 144.8 128 55.5
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 6.1e-33 144.4 124 55.6
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 1.0e-32 143.7 128 54.7
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 1.8e-32 142.9 124 54.8
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 2.3e-32 142.5 117 57.3
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 3.0e-32 142.1 128 55.5
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 5.2e-32 141.4 133 53.4
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 1.5e-31 139.8 128 53.1
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 1.5e-31 139.8 108 59.3
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 2.6e-31 139.0 129 52.7
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 2.6e-31 139.0 133 53.4
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 4.4e-31 138.3 129 52.7
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 4.4e-31 138.3 118 55.1
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 9.7e-31 137.1 130 50.8
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 9.7e-31 137.1 132 50.0
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 2.2e-30 136.0 130 50.0
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 3.7e-30 135.2 118 52.5
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 8.3e-30 134.0 115 53.9
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 8.3e-30 134.0 131 49.6
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 1.4e-29 133.3 130 48.5
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 1.8e-29 132.9 131 48.9
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 2.4e-29 132.5 122 54.1
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 4.1e-29 131.7 127 51.2
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 5.3e-29 131.3 128 50.0
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 5.3e-29 131.3 128 52.3
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 5.3e-29 131.3 127 52.0
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 9.1e-29 130.6 129 49.6
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 1.6e-28 129.8 129 49.6
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 1.6e-28 129.8 129 50.4
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 1.6e-28 129.8 129 50.4
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 1.6e-28 129.8 130 51.5
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.6e-28 129.8 125 53.6
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 2.0e-28 129.4 129 47.3
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 2.0e-28 129.4 125 47.2
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 3.5e-28 128.6 124 52.4
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 1.0e-27 127.1 128 49.2
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 1.3e-27 126.7 129 44.2
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 2.2e-27 125.9 115 48.7
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 3.8e-27 125.2 125 47.2
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 5.0e-27 124.8 127 48.0
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 6.5e-27 124.4 84 63.1
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.5e-26 122.5 127 48.8
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 5.5e-26 121.3 132 47.0
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 9.4e-26 120.6 127 47.2
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 2.7e-25 119.0 121 49.6
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.0e-24 117.1 107 48.6
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 2.3e-24 115.9 127 46.5
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 5.2e-24 114.8 96 53.1
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 6.8e-24 114.4 78 61.5
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 8.8e-24 114.0 122 46.7
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 2.0e-23 112.8 126 45.2
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 5.7e-23 111.3 134 47.0
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 1.3e-22 110.2 105 50.5
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.7e-22 109.8 136 46.3
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 3.1e-21 105.5 79 57.0
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 9.1e-21 104.0 108 47.2
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 2.0e-20 102.8 128 38.3
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 5.9e-20 101.3 87 48.3
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 3.8e-19 98.6 97 46.4
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 1.1e-18 97.1 129 41.1
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.5e-18 96.7 87 49.4
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 6.1e-17 91.3 97 42.3
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 2.3e-16 89.4 58 65.5
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 2.3e-16 89.4 128 43.0
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 4.4e-15 85.1 96 46.9
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 4.9e-14 81.6 77 51.9
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.4e-13 80.1 76 50.0
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 2.4e-13 79.3 152 35.5
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 7.8e-12 74.3 62 51.6
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 5.0e-11 71.6 131 35.1
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 6.6e-11 71.2 74 45.9
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 1.5e-10 70.1 66 45.5
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 1.5e-10 70.1 68 47.1
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 1.0e-08 63.9 65 53.8
AagrBONN_evm.TU.Sc2ySwM_362.1645 Anthoceros agrestis HOM05D002174 ORTHO05D005941 1.2e-07 60.5 72 41.7
Thhalv10017379m.g Eutrema salsugineum HOM05D002174 ORTHO05D005941 2.0e-07 59.7 117 30.8
AagrBONN_evm.TU.Sc2ySwM_228.3892 Anthoceros agrestis HOM05D002174 ORTHO05D005941 5.8e-07 58.2 92 33.7
BcaB02g10211 Brassica carinata HOM05D002174 ORTHO05D005941 7.5e-07 57.8 116 29.3
BcaC02g11023 Brassica carinata HOM05D002174 ORTHO05D005941 7.5e-07 57.8 116 29.3
C04p22080 Brassica napus HOM05D002174 ORTHO05D005941 7.5e-07 57.8 116 29.3
BolC4t23731H Brassica oleracea HOM05D002174 ORTHO05D005941 7.5e-07 57.8 116 29.3
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 7.5e-07 57.8 128 32.0
FAN16G0236 Fragaria x ananassa HOM05D002174 ORTHO05D005941 7.5e-07 57.8 115 33.9
A07p19380 Brassica napus HOM05D002174 ORTHO05D005941 9.8e-07 57.4 116 29.3
BraA07t29643Z Brassica rapa HOM05D002174 ORTHO05D005941 9.8e-07 57.4 116 29.3
CARHR122070 Cardamine hirsuta HOM05D002174 ORTHO05D005941 9.8e-07 57.4 116 31.0
FAN25G1103 Fragaria x ananassa HOM05D002174 ORTHO05D005941 1.7e-06 56.6 115 33.0
CAN.G197.4 Capsicum annuum HOM05D002174 ORTHO05D005447 2.2e-06 56.2 111 36.0
FvH4_3g36080 Fragaria vesca HOM05D002174 ORTHO05D005941 2.2e-06 56.2 115 33.0
CDE01G0513 Ceratophyllum demersum HOM05D002174 ORTHO05D005447 2.9e-06 55.8 119 30.3
Nitab4.5_0001414g0010 Nicotiana tabacum HOM05D002174 ORTHO05D005447 2.9e-06 55.8 87 40.2
Nitab4.5_0003294g0030 Nicotiana tabacum HOM05D002174 ORTHO05D005447 2.9e-06 55.8 87 40.2
Cfa009013 Carpinus fangiana HOM05D002174 ORTHO05D005941 4.9e-06 55.1 116 31.9
Peaxi162Scf00065g00015 Petunia axillaris HOM05D002174 ORTHO05D005447 4.9e-06 55.1 87 39.1
Solyc01g060070.3 Solanum lycopersicum HOM05D002174 ORTHO05D005447 4.9e-06 55.1 87 39.1
Sopen01g026250 Solanum pennellii HOM05D002174 ORTHO05D005447 4.9e-06 55.1 87 39.1
vmacro14518 Vaccinium macrocarpon HOM05D002174 ORTHO05D005941 4.9e-06 55.1 118 28.8
Lj3C829T9 Lonicera japonica HOM05D002174 ORTHO05D005447 6.4e-06 54.7 87 37.9
Duzib128G1008 Durio zibethinus HOM05D004743 ORTHO05D005698 8.3e-06 54.3 124 33.1
ECA246G2588 Erigeron canadensis HOM05D002174 ORTHO05D005447 8.3e-06 54.3 90 36.7
FAN21G2955 Fragaria x ananassa HOM05D002174 ORTHO05D005941 8.3e-06 54.3 115 32.2
Oeu016484.2 Olea europaea HOM05D002174 ORTHO05D005447 8.3e-06 54.3 87 39.1
PGR119G2250 Punica granatum HOM05D002174 ORTHO05D005941 8.3e-06 54.3 116 31.9
SEGI_11453 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 8.3e-06 54.3 121 29.8


User provided reference genes

Program Settings