Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 6.3e-194 680.6 356 100.0
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.1e-174 616.7 358 90.5
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 5.2e-95 352.1 367 54.8
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 7.5e-86 321.6 372 51.1
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 7.7e-83 311.6 368 49.7
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 2.9e-82 309.7 326 53.1
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 8.5e-82 308.1 329 52.9
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.1e-81 307.8 369 50.7
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.5e-81 306.6 367 50.4
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 3.2e-81 306.2 367 50.4
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.2e-81 305.1 368 50.0
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.2e-80 304.3 368 48.4
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.0e-79 301.2 359 49.3
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.3e-79 300.1 373 49.3
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 2.3e-79 300.1 369 49.3
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.3e-79 300.1 347 51.3
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.5e-78 297.4 367 49.3
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 4.4e-78 295.8 365 48.5
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.3e-77 294.3 324 51.2
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 4.9e-77 292.4 324 50.9
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 4.9e-77 292.4 360 47.5
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 6.3e-77 292.0 324 50.9
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 3.1e-76 289.7 364 46.7
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 5.4e-76 288.9 360 48.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 2.3e-74 283.5 369 47.4
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 5.0e-74 282.3 353 46.7
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 6.6e-74 282.0 361 45.4
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 6.6e-74 282.0 362 47.2
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 8.6e-74 281.6 366 47.3
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 1.9e-73 280.4 353 46.2
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 5.6e-73 278.9 352 46.3
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 7.3e-73 278.5 366 46.4
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 3.6e-72 276.2 367 43.3
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.0e-71 274.6 373 45.3
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 2.3e-71 273.5 365 44.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 6.8e-71 271.9 381 44.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 2.0e-70 270.4 365 46.3
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.3e-69 267.7 365 44.4
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.7e-69 267.3 357 47.3
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 4.9e-69 265.8 364 44.0
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 8.3e-69 265.0 372 42.7
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.8e-68 263.8 353 45.0
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.4e-68 263.5 344 46.2
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 2.4e-68 263.5 374 43.6
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 5.4e-68 262.3 379 43.3
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 7.0e-68 261.9 316 50.3
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 7.8e-67 258.5 313 50.2
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 3.9e-66 256.1 353 44.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 6.6e-66 255.4 347 46.1
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 8.6e-66 255.0 366 44.3
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 5.6e-65 252.3 328 44.8
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 7.3e-65 251.9 356 43.5
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 6.2e-64 248.8 309 47.2
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.0e-63 248.1 347 43.5
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 4.0e-63 246.1 356 44.1
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.0e-63 246.1 322 45.0
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 8.3e-61 238.4 331 45.0
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.9e-60 237.3 345 42.0
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.2e-60 236.5 335 42.7
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.6e-59 234.2 360 42.5
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 2.7e-59 233.4 364 43.4
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.1e-57 228.0 355 41.7
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.2e-56 224.6 311 42.8
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.8e-56 223.4 300 46.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.6e-56 223.0 279 48.7
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 3.4e-54 216.5 266 49.2
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 6.4e-53 212.2 350 41.7
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.4e-52 211.1 354 40.4
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.4e-52 211.1 354 40.4
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.4e-52 211.1 352 39.2
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 4.1e-52 209.5 303 42.6
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.7e-51 206.8 323 42.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.0e-50 203.4 252 48.8
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.5e-49 200.3 302 40.4
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 9.5e-49 198.4 272 44.9
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.2e-48 198.0 272 45.6
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 5.8e-46 189.1 279 41.2
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 9.9e-46 188.3 218 53.7
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.4e-44 183.7 369 35.2
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 3.9e-42 176.4 280 38.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.9e-41 174.1 297 40.1
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 1.1e-39 168.3 280 38.6
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.4e-39 167.9 209 53.6
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.1e-39 166.8 339 34.8
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.5e-38 164.5 216 48.6
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 3.4e-38 163.3 358 34.9
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 4.4e-38 162.9 347 35.4
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 7.6e-38 162.2 347 35.4
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 4.9e-37 159.5 341 35.2
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 8.4e-37 158.7 361 33.5
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.1e-36 158.3 341 34.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.4e-36 157.9 346 35.3
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.4e-36 157.9 346 35.3
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.4e-36 157.9 346 35.3
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 3.2e-36 156.8 358 34.4
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 4.2e-36 156.4 333 37.2
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 1.2e-35 154.8 350 34.9
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.6e-35 154.5 333 36.9
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.1e-31 141.7 145 53.8
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 4.0e-31 139.8 277 33.9
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 1.5e-30 137.9 347 32.0
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 5.8e-30 136.0 276 35.1
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 2.9e-29 133.7 310 35.5
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 3.0e-26 123.6 149 47.7
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 3.3e-25 120.2 292 32.5
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 5.6e-25 119.4 289 33.6
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.0e-23 113.2 270 33.3
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 2.0e-22 110.9 319 31.0
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 8.4e-21 105.5 280 31.4
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 4.2e-20 103.2 99 57.6
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.1e-17 95.1 238 34.9
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.1e-15 87.0 117 41.9
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.1e-15 87.0 117 41.9
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.9e-12 77.8 82 52.4
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 3.1e-07 60.5 62 46.8


User provided reference genes

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