Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1777 Papaver somniferum HOM05D005686 ORTHO05D006798 1.5e-108 396.4 218 100.0
PSO063G6522 Papaver somniferum HOM05D005686 ORTHO05D006798 2.3e-106 389.0 218 98.2
ECA240G1888 Erigeron canadensis HOM05D005686 ORTHO05D006798 6.9e-74 281.2 219 64.8
CSS0027001 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 1.7e-72 276.6 190 70.5
CSS0031712 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 3.8e-72 275.4 190 70.5
Lsat_1_v5_gn_7_57081 Lactuca sativa HOM05D005686 ORTHO05D006798 3.8e-72 275.4 188 70.7
CiPaw.08G000400 Carya illinoinensis HOM05D005686 ORTHO05D006798 4.2e-71 271.9 187 69.5
Hma1.2p1_0391F.1_g142870 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 7.1e-71 271.2 187 69.0
COL.COLO4_09003 Corchorus olitorius HOM05D005686 ORTHO05D006798 1.6e-70 270.0 189 69.3
HanXRQChr03g0066651 Helianthus annuus HOM05D005686 ORTHO05D006798 7.8e-70 267.7 188 70.2
GSVIVG01034255001 Vitis vinifera HOM05D005686 ORTHO05D006798 1.0e-69 267.3 188 68.6
Thecc.09G202000 Theobroma cacao HOM05D005686 ORTHO05D006798 5.1e-69 265.0 188 68.1
TAR383G0056 Trochodendron aralioides HOM05D005686 ORTHO05D006798 5.1e-69 265.0 186 67.7
DCAR_014582 Daucus carota HOM05D005686 ORTHO05D006798 3.3e-68 262.3 191 68.1
MD04G1000800 Malus domestica HOM05D005686 ORTHO05D006798 3.3e-68 262.3 186 67.2
Cfa012874 Carpinus fangiana HOM05D005686 ORTHO05D006798 4.3e-68 261.9 187 69.5
FvH4_4g00120 Fragaria vesca HOM05D005686 ORTHO05D006798 5.6e-68 261.5 188 66.5
Glyma.08G359900 Glycine max HOM05D005686 ORTHO05D006798 9.6e-68 260.8 188 66.5
ClCG03G011610 Citrullus lanatus HOM05D005686 ORTHO05D006798 1.3e-67 260.4 189 67.2
Glyma.01G001000 Glycine max HOM05D005686 ORTHO05D006798 1.6e-67 260.0 223 59.2
ATR0626G256 Amborella trichopoda HOM05D005686 ORTHO05D006798 2.1e-67 259.6 187 66.8
Aqoxy7G02566 Aquilegia oxysepala HOM05D005686 ORTHO05D006798 2.8e-67 259.2 187 68.4
Ciclev10009500m.g Citrus clementina HOM05D005686 ORTHO05D006798 2.8e-67 259.2 219 59.8
TWI32G0912 Tripterygium wilfordii HOM05D005686 ORTHO05D006798 3.6e-67 258.8 187 65.8
FAN17G2251 Fragaria x ananassa HOM05D005686 ORTHO05D006798 4.8e-67 258.5 188 65.4
Cpa.g.sc46.112 Carica papaya HOM05D005686 ORTHO05D006798 6.2e-67 258.1 188 66.5
Gohir.A08G016700 Gossypium hirsutum HOM05D005686 ORTHO05D006798 8.1e-67 257.7 220 62.7
CANSAT80G2136 Cannabis sativa HOM05D005686 ORTHO05D006798 1.1e-66 257.3 190 64.2
Atru.chr7.1021 Acer truncatum HOM05D005686 ORTHO05D006798 2.4e-66 256.1 219 58.9
FAN22G1914 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.4e-66 256.1 188 65.4
Gorai.004G024000 Gossypium raimondii HOM05D005686 ORTHO05D006798 9.0e-66 254.2 188 67.6
Sed0010250 Sechium edule HOM05D005686 ORTHO05D006798 1.2e-65 253.8 187 65.8
Manes.18G145300 Manihot esculenta HOM05D005686 ORTHO05D006798 2.6e-65 252.7 188 65.4
PGR142G1985 Punica granatum HOM05D005686 ORTHO05D006798 4.5e-65 251.9 188 63.8
RcHm_v2.0_Chr4g0384721 Rosa chinensis HOM05D005686 ORTHO05D006798 7.6e-65 251.1 188 64.4
vmacro20730 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 7.6e-65 251.1 233 56.2
Migut.J00862 Erythranthe guttata HOM05D005686 ORTHO05D006798 9.9e-65 250.8 187 63.6
Potri.006G080900 Populus trichocarpa HOM05D005686 ORTHO05D006798 9.9e-65 250.8 187 65.8
Gohir.D08G027100 Gossypium hirsutum HOM05D005686 ORTHO05D006798 1.3e-64 250.4 188 66.0
HanXRQChr09g0245301 Helianthus annuus HOM05D005686 ORTHO05D006798 1.7e-64 250.0 219 60.7
Cc06_g23520 Coffea canephora HOM05D005686 ORTHO05D006798 2.2e-64 249.6 187 65.2
Nitab4.5_0004788g0010 Nicotiana tabacum HOM05D005686 ORTHO05D006798 2.2e-64 249.6 187 62.0
Potri.018G151500 Populus trichocarpa HOM05D005686 ORTHO05D006798 3.8e-64 248.8 187 65.2
Nitab4.5_0000019g0070 Nicotiana tabacum HOM05D005686 ORTHO05D006798 4.9e-64 248.4 187 62.0
Ca_25642_v3 Cicer arietinum L. HOM05D005686 ORTHO05D006798 6.4e-64 248.1 187 63.6
MSTRG.5975 Avicennia marina HOM05D005686 ORTHO05D006798 2.4e-63 246.1 184 63.0
Eucgr.C02152 Eucalyptus grandis HOM05D005686 ORTHO05D006798 3.2e-63 245.7 188 64.9
Oeu000268.1 Olea europaea HOM05D005686 ORTHO05D006798 7.1e-63 244.6 185 62.7
QL11p005743 Quercus lobata HOM05D005686 ORTHO05D006798 7.1e-63 244.6 241 53.9
arahy.Tifrunner.gnm1.ann1.G6JDG7 Arachis hypogaea HOM05D005686 ORTHO05D006798 1.6e-62 243.4 188 63.3
arahy.Tifrunner.gnm1.ann1.1A52WD Arachis hypogaea HOM05D005686 ORTHO05D006798 2.1e-62 243.0 188 63.3
Os06g0703800 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 2.7e-62 242.7 187 64.2
Sc23g0005700 Simmondsia chinensis HOM05D005686 ORTHO05D006798 2.7e-62 242.7 187 62.0
SGA_v2.0_scaffold21G09585 Striga asiatica HOM05D005686 ORTHO05D006798 7.9e-62 241.1 209 57.4
HPP92_017040 Vanilla planifolia HOM05D005686 ORTHO05D006798 1.3e-61 240.4 187 65.2
Lj2g0013423 Lotus japonicus HOM05D005686 ORTHO05D006798 3.0e-61 239.2 187 62.6
EL10Ac2g03596 Beta vulgaris HOM05D005686 ORTHO05D006798 5.1e-61 238.4 188 61.7
AUR62020755 Chenopodium quinoa HOM05D005686 ORTHO05D006798 1.9e-60 236.5 188 61.2
BraA03t10552Z Brassica rapa HOM05D005686 ORTHO05D006798 3.3e-60 235.7 187 62.0
Aa31LG3G13950 Aethionema arabicum HOM05D005244 ORTHO05D006539 4.3e-60 235.3 189 61.4
Psat1g052000 Pisum sativum HOM05D005686 ORTHO05D006798 7.4e-60 234.6 187 62.6
Sp6g19800 Schrenkiella parvula HOM05D005686 ORTHO05D006798 9.6e-60 234.2 187 62.0
A10p16070 Brassica napus HOM05D005686 ORTHO05D006798 2.1e-59 233.0 187 61.5
BraA10t43622Z Brassica rapa HOM05D005686 ORTHO05D006798 2.1e-59 233.0 187 61.5
CDE04G0009 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 2.8e-59 232.6 187 61.5
Os02g0139100 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 3.6e-59 232.3 190 62.6
Peaxi162Scf00322g00914 Petunia axillaris HOM05D005686 ORTHO05D006798 3.6e-59 232.3 199 58.3
BcaB08g36164 Brassica carinata HOM05D005686 ORTHO05D006798 4.8e-59 231.9 187 61.0
Zm00001eb232010 Zea mays HOM05D005686 ORTHO05D006798 6.2e-59 231.5 187 62.0
CARHR271940 Cardamine hirsuta HOM05D005686 ORTHO05D006798 8.1e-59 231.1 188 59.6
AL8G34220 Arabidopsis lyrata HOM05D005686 ORTHO05D006798 1.1e-58 230.7 187 59.4
BcaC04g19906 Brassica carinata HOM05D005686 ORTHO05D006798 1.8e-58 229.9 187 61.0
C09p50020 Brassica napus HOM05D005686 ORTHO05D006798 1.8e-58 229.9 187 61.0
BolC9t57855H Brassica oleracea HOM05D005686 ORTHO05D006798 1.8e-58 229.9 187 61.0
C03p14560 Brassica napus HOM05D005686 ORTHO05D006798 2.4e-58 229.6 187 60.4
AUR62027958 Chenopodium quinoa HOM05D005686 ORTHO05D006798 2.4e-58 229.6 187 59.4
unitig_699.g19254 Utricularia gibba HOM05D005686 ORTHO05D006798 2.4e-58 229.6 186 58.6
Thhalv10014732m.g Eutrema salsugineum HOM05D005686 ORTHO05D006798 6.9e-58 228.0 187 60.4
AT5G58110 Arabidopsis thaliana HOM05D005686 ORTHO05D006798 1.2e-57 227.3 187 58.8
Carub.0008s1867 Capsella rubella HOM05D005686 ORTHO05D006798 1.2e-57 227.3 187 58.8
A03p12400 Brassica napus HOM05D005686 ORTHO05D006798 1.5e-57 226.9 187 59.4
BcaB01g04476 Brassica carinata HOM05D005686 ORTHO05D006798 2.0e-57 226.5 187 60.4
MELO3C010013.2 Cucumis melo HOM05D005686 ORTHO05D006798 3.4e-57 225.7 302 44.0
BolC3t13898H Brassica oleracea HOM05D005686 ORTHO05D006798 5.8e-57 224.9 187 58.8
THA.LOC104811843 Tarenaya hassleriana HOM05D005686 ORTHO05D006798 8.4e-56 221.1 189 57.1
vmacro20894 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 1.1e-55 220.7 291 44.7
Lalb_Chr24g0401731 Lupinus albus HOM05D005686 ORTHO05D006798 2.7e-54 216.1 218 51.4
Dinv26497 Davidia involucrata HOM05D005686 ORTHO05D006798 6.0e-54 214.9 146 69.9
CsaV3_1G044180 Cucumis sativus L. HOM05D005686 ORTHO05D006798 3.0e-53 212.6 176 61.9
CAN.G357.2 Capsicum annuum HOM05D005686 ORTHO05D006798 6.7e-53 211.5 142 66.9
Medtr6g093220 Medicago truncatula HOM05D005686 ORTHO05D006798 6.7e-53 211.5 190 56.8
BcaB01g04553 Brassica carinata HOM05D005686 ORTHO05D006798 1.5e-52 210.3 192 55.7
Rhsim01G0102500 Rhododendron simsii HOM05D005686 ORTHO05D006798 7.4e-52 208.0 332 40.1
FAN12G3064 Fragaria x ananassa HOM05D005686 ORTHO05D006798 4.8e-51 205.3 144 67.4
Duzib170G0214 Durio zibethinus HOM05D005686 ORTHO05D006798 1.8e-50 203.4 188 56.9
Prupe.1G000800 Prunus persica HOM05D005686 ORTHO05D006798 6.9e-50 201.4 218 50.9
Oeu018307.1 Olea europaea HOM05D005686 ORTHO05D006798 9.0e-50 201.1 187 56.1
unitig_899.g15184 Utricularia gibba HOM05D000036 ORTHO05D000095 1.7e-48 196.8 174 55.2
Oeu000956.1 Olea europaea HOM05D005686 ORTHO05D006798 2.9e-48 196.1 187 51.9
Gorai.009G341500 Gossypium raimondii HOM05D005686 ORTHO05D006798 2.5e-44 183.0 154 60.4
TPR.G21341 Trifolium pratense HOM05D005686 ORTHO05D006798 5.7e-44 181.8 143 62.2
Gohir.D05G318500 Gossypium hirsutum HOM05D005686 ORTHO05D006798 6.3e-43 178.3 147 61.9
MBI13_g46510_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 1.1e-42 177.6 113 76.1
Hma1.2p1_0394F.1_g143240 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 9.0e-42 174.5 123 66.7
Pp3c5_4250 Physcomitrium patens HOM05D005686 ORTHO05D006798 7.2e-39 164.9 190 46.3
Pp3c16_2550 Physcomitrium patens HOM05D005686 ORTHO05D006798 9.3e-39 164.5 188 47.9
SMO164G0027 Selaginella moellendorffii HOM05D005686 ORTHO05D006798 2.1e-38 163.3 188 46.3
SEGI_10084 Sequoiadendron giganteum HOM05D005686 ORTHO05D006798 2.7e-38 162.9 146 55.5
Mapoly0062s0098 Marchantia polymorpha HOM05D005686 ORTHO05D006798 1.8e-37 160.2 189 46.0
Actinidia07538 Actinidia chinensis HOM05D005686 ORTHO05D006798 4.8e-35 152.1 105 73.3
Nn8g41269 Nelumbo nucifera HOM05D005686 ORTHO05D006798 2.4e-34 149.8 100 76.0
Hund19347 Selenicereus undatus HOM05D005686 ORTHO05D006798 5.1e-29 132.1 188 41.5
VMungo0464G1575 Vigna mungo HOM05D005686 ORTHO05D006798 5.1e-29 132.1 267 36.3
Oeu021239.2 Olea europaea HOM05D005686 ORTHO05D006798 2.6e-28 129.8 187 41.2
CDE07G1048 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 2.2e-27 126.7 122 54.9
Lju50E1T0 Lonicera japonica HOM05D005686 ORTHO05D006798 1.1e-26 124.4 90 68.9
Haze_21245 Corylus avellana HOM05D005686 ORTHO05D006798 5.3e-26 122.1 89 68.5
MBI13_g08742_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 2.2e-24 116.7 136 50.0
MBI13_g33582_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 1.1e-18 97.8 75 58.7
MCO14G409 Micromonas commoda HOM05D005686 ORTHO05D006798 6.5e-16 88.6 157 37.6
ClCG04G012860 Citrullus lanatus HOM05D005686 ORTHO05D006798 1.5e-15 87.4 76 60.5
FvH4_1g23212 Fragaria vesca HOM05D005686 ORTHO05D006798 2.5e-15 86.7 90 46.7
FAN26G0690 Fragaria x ananassa HOM05D005686 ORTHO05D006798 5.5e-15 85.5 89 47.2
SalBow6G6154 Salvia bowleyana HOM05D005686 ORTHO05D006798 9.4e-15 84.7 69 59.4
Cre07.g321850 Chlamydomonas reinhardtii HOM05D005686 ORTHO05D006798 1.2e-14 84.3 190 32.6
FAN25G3234 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.1e-14 83.6 89 43.8
FAN17G2013 Fragaria x ananassa HOM05D005686 ORTHO05D006798 1.0e-13 81.3 89 43.8
SMO146G0036 Selaginella moellendorffii HOM05D005686 ORTHO05D006798 1.8e-13 80.5 183 27.9
arahy.Tifrunner.gnm1.ann1.U8PUWG Arachis hypogaea HOM05D005611 ORTHO05D006852 4.4e-12 75.9 54 68.5
SGA_v2.0_scaffold25G11073 Striga asiatica HOM05D005686 ORTHO05D006798 9.7e-12 74.7 106 37.7
FvH4_7g03690 Fragaria vesca HOM05D005686 ORTHO05D006798 1.7e-11 73.9 82 50.0
arahy.Tifrunner.gnm1.ann1.11LFFZ Arachis hypogaea HOM05D005686 ORTHO05D006798 2.2e-11 73.6 57 63.2
FAN01G2054 Fragaria x ananassa HOM05D005686 ORTHO05D006798 4.1e-10 69.3 86 45.3
FAN07G2653 Fragaria x ananassa HOM05D005686 ORTHO05D006798 1.2e-09 67.8 52 59.6
FAN23G2196 Fragaria x ananassa HOM05D005686 ORTHO05D006798 1.5e-07 60.8 49 59.2
BcaC07g37307 Brassica carinata HOM05D005686 ORTHO05D006798 2.1e-06 57.0 49 61.2
C08p07420 Brassica napus HOM05D005686 ORTHO05D006798 2.1e-06 57.0 49 61.2
BolC8t47587H Brassica oleracea HOM05D005686 ORTHO05D006798 2.1e-06 57.0 49 61.2


User provided reference genes

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