Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 4.8e-83 311.2 168 100.0
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 3.1e-82 308.5 168 98.8
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 9.1e-42 174.1 164 56.1
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.9e-40 169.1 174 52.3
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 6.5e-40 167.9 171 55.6
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.9e-39 166.4 165 52.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 2.5e-39 166.0 163 55.2
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 5.5e-39 164.9 164 52.4
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.6e-38 163.3 164 54.9
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 2.7e-38 162.5 164 53.0
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 6.1e-38 161.4 165 52.7
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 6.1e-38 161.4 164 53.7
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.0e-37 160.6 164 53.0
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.4e-37 160.2 164 54.3
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 2.3e-37 159.5 164 52.4
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 5.2e-37 158.3 164 52.4
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 8.8e-37 157.5 164 52.4
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.1e-36 157.1 164 52.4
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 2.6e-36 156.0 164 51.2
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 5.7e-36 154.8 171 50.3
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 7.5e-36 154.5 164 50.6
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 9.7e-36 154.1 164 51.2
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.3e-35 153.7 164 51.2
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 2.8e-35 152.5 164 48.8
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 1.1e-34 150.6 164 49.4
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.1e-34 150.6 168 48.8
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.4e-34 150.2 164 49.4
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 1.8e-34 149.8 154 49.4
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 3.1e-34 149.1 164 51.2
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 4.1e-34 148.7 171 48.5
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 5.3e-34 148.3 163 49.1
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 1.2e-33 147.1 164 49.4
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 1.6e-33 146.7 164 47.6
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 2.7e-33 146.0 164 48.8
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 4.5e-33 145.2 173 48.0
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.7e-32 143.3 169 49.7
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 2.2e-32 142.9 164 49.4
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 6.5e-32 141.4 166 49.4
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.1e-31 140.6 164 47.6
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.1e-31 140.6 166 49.4
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.5e-31 140.2 165 44.8
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 3.2e-31 139.0 164 47.6
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 7.2e-31 137.9 164 47.0
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 7.2e-31 137.9 164 47.0
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.6e-30 136.7 134 55.2
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 2.1e-30 136.3 165 46.7
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 2.7e-30 136.0 165 47.9
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 4.7e-30 135.2 169 46.2
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 5.2e-29 131.7 166 46.4
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 5.2e-29 131.7 161 47.8
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 2.6e-28 129.4 165 43.6
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 3.4e-28 129.0 164 44.5
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 3.4e-28 129.0 155 47.1
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 4.4e-28 128.6 165 44.2
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 5.7e-28 128.3 165 46.1
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.7e-27 126.7 164 43.9
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 2.8e-27 125.9 171 43.3
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 8.3e-27 124.4 164 45.1
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 3.1e-26 122.5 164 43.3
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 9.1e-26 120.9 160 44.4
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 1.2e-25 120.6 164 42.7
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.6e-25 120.2 164 42.7
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 2.7e-25 119.4 140 50.0
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 4.5e-25 118.6 164 44.5
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 5.9e-25 118.2 164 42.7
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 7.7e-25 117.9 165 40.0
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 6.5e-24 114.8 118 50.0
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 2.5e-23 112.8 164 40.2
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 3.2e-23 112.5 164 40.9
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 5.5e-23 111.7 138 44.9
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.6e-22 110.2 170 38.8
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 2.1e-22 109.8 164 40.2
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 2.1e-22 109.8 164 40.2
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 2.1e-22 109.8 164 40.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 2.7e-22 109.4 172 43.0
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 3.6e-22 109.0 164 40.2
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 3.6e-22 109.0 164 40.2
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 4.7e-22 108.6 192 36.5
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 4.7e-22 108.6 165 40.0
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 6.1e-22 108.2 172 39.0
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 8.0e-22 107.8 165 38.8
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 1.0e-21 107.5 171 39.8
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 1.4e-21 107.1 172 39.5
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 1.4e-21 107.1 172 40.1
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.8e-21 106.7 165 40.0
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.8e-21 106.7 165 40.6
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.8e-21 106.7 165 40.6
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 5.2e-21 105.1 115 51.3
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 5.2e-21 105.1 171 42.7
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 8.8e-21 104.4 169 39.1
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 2.0e-20 103.2 171 38.0
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 4.4e-20 102.1 171 37.4
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 9.8e-20 100.9 161 39.1
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 1.3e-19 100.5 163 35.0
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 1.7e-19 100.1 113 48.7
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 1.7e-19 100.1 171 39.2
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 2.2e-19 99.8 207 34.3
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 4.9e-19 98.6 109 49.5
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 5.4e-18 95.1 171 37.4
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 9.2e-18 94.4 118 45.8
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 4.5e-17 92.0 128 43.8
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 4.5e-17 92.0 169 34.9
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 1.3e-16 90.5 110 46.4
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 8.0e-14 81.3 120 40.8
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 1.2e-12 77.4 101 42.6
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 5.7e-12 75.1 167 29.3
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 7.5e-12 74.7 164 32.9
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 9.8e-12 74.3 167 31.1
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 1.7e-11 73.6 106 40.6
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 6.4e-11 71.6 72 52.8
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 1.8e-10 70.1 68 57.4
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 3.2e-10 69.3 144 34.7
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.2e-09 67.4 125 36.0
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 2.7e-09 66.2 164 29.9
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 7.8e-09 64.7 131 32.8
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 8.0e-06 54.7 38 68.4


User provided reference genes

Program Settings