Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 2.3e-111 405.6 204 100.0
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 1.9e-110 402.5 204 99.5
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 8.6e-103 377.1 204 93.1
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 2.7e-72 275.8 139 95.0
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.1e-65 253.8 205 62.0
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 2.7e-64 249.2 205 60.5
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 4.3e-62 241.9 221 57.0
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.6e-61 240.0 199 60.8
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 8.1e-61 237.7 220 57.7
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 1.8e-60 236.5 217 59.9
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 3.1e-60 235.7 219 57.5
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 4.0e-60 235.3 181 64.1
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 6.9e-60 234.6 221 56.1
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 6.9e-60 234.6 164 69.5
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 9.0e-60 234.2 218 57.3
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 9.0e-60 234.2 214 56.1
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 9.0e-60 234.2 218 56.9
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 9.0e-60 234.2 164 69.5
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 1.2e-59 233.8 164 68.3
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 1.5e-59 233.4 221 56.6
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.5e-59 233.4 194 59.8
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 1.5e-59 233.4 209 57.9
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 5.8e-59 231.5 220 56.8
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 5.8e-59 231.5 186 61.8
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 1.3e-58 230.3 225 56.0
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.3e-58 230.3 223 55.6
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 1.3e-58 230.3 164 68.3
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 1.7e-58 229.9 218 56.0
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.7e-58 229.9 220 55.9
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 2.2e-58 229.6 209 56.5
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 2.2e-58 229.6 219 57.5
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 2.9e-58 229.2 164 65.9
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 2.9e-58 229.2 205 58.0
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 3.8e-58 228.8 186 61.8
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 6.4e-58 228.0 154 69.5
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 6.4e-58 228.0 186 61.3
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 8.4e-58 227.6 218 56.0
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.1e-57 227.3 218 55.5
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 1.4e-57 226.9 193 59.6
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 1.9e-57 226.5 186 61.3
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 3.2e-57 225.7 185 60.0
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 5.5e-57 224.9 164 65.9
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 7.1e-57 224.6 218 55.0
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 7.1e-57 224.6 180 61.7
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 1.2e-56 223.8 164 64.6
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.2e-56 223.8 193 59.1
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.6e-56 223.4 193 60.1
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 2.1e-56 223.0 215 55.3
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 2.7e-56 222.6 193 58.5
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 2.7e-56 222.6 218 54.6
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 2.7e-56 222.6 216 52.8
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 3.5e-56 222.2 172 64.0
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 4.6e-56 221.9 154 68.2
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 4.6e-56 221.9 185 62.2
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 7.9e-56 221.1 218 54.6
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 7.9e-56 221.1 186 59.7
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 1.0e-55 220.7 164 64.0
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.0e-55 220.7 219 53.0
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 1.3e-55 220.3 186 59.7
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 1.3e-55 220.3 188 59.6
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 1.8e-55 219.9 194 58.8
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.8e-55 219.9 218 55.5
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 1.8e-55 219.9 218 55.0
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 1.8e-55 219.9 218 56.4
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 1.8e-55 219.9 202 55.9
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.8e-55 219.9 206 55.8
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 2.3e-55 219.5 194 59.8
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 2.3e-55 219.5 218 56.0
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 2.3e-55 219.5 218 56.0
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 3.0e-55 219.2 171 62.6
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 3.9e-55 218.8 191 59.2
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 5.1e-55 218.4 194 59.3
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 5.1e-55 218.4 214 53.7
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 5.1e-55 218.4 155 66.5
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 8.7e-55 217.6 218 55.0
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 1.1e-54 217.2 218 55.0
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 1.5e-54 216.9 171 62.0
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 1.5e-54 216.9 171 62.0
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 1.5e-54 216.9 171 62.0
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 1.5e-54 216.9 171 62.0
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 1.5e-54 216.9 164 65.2
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 1.5e-54 216.9 218 55.0
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 1.9e-54 216.5 171 61.4
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 1.9e-54 216.5 171 61.4
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 1.9e-54 216.5 200 57.5
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 2.5e-54 216.1 171 62.0
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 2.5e-54 216.1 171 62.0
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 4.3e-54 215.3 180 60.0
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 5.6e-54 214.9 171 61.4
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 9.6e-54 214.2 171 60.8
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 9.6e-54 214.2 183 56.8
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 9.6e-54 214.2 171 60.8
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 9.6e-54 214.2 165 63.0
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.3e-53 213.8 183 59.6
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 1.3e-53 213.8 171 60.8
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 1.6e-53 213.4 154 68.2
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 2.1e-53 213.0 145 69.0
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 3.7e-53 212.2 205 56.1
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 6.2e-53 211.5 187 56.7
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 6.2e-53 211.5 191 56.0
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 8.1e-53 211.1 171 60.8
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 8.1e-53 211.1 171 60.8
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 8.1e-53 211.1 171 60.8
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 5.3e-52 208.4 155 65.2
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 6.9e-52 208.0 199 55.8
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 9.0e-52 207.6 186 58.6
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 7.6e-51 204.5 186 55.9
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 3.2e-49 199.1 234 49.1
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 4.2e-49 198.7 199 52.3
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 1.2e-48 197.2 230 50.4
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 6.0e-48 194.9 168 57.7
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 6.0e-48 194.9 184 52.7
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 1.0e-47 194.1 221 50.7
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 1.8e-47 193.4 221 49.8
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.0e-47 192.6 218 50.5
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 8.2e-45 184.5 150 60.7
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 1.4e-44 183.7 165 58.2
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 1.2e-43 180.6 158 53.8
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 1.5e-43 180.3 283 38.9
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 3.8e-42 175.6 138 63.8
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 2.5e-41 172.9 271 39.1
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 8.7e-39 164.5 143 60.1
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 3.3e-38 162.5 151 57.6
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 1.3e-37 160.6 221 44.3
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 3.7e-37 159.1 89 80.9
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 3.1e-36 156.0 128 60.9
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 6.9e-36 154.8 97 75.3
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 9.0e-36 154.5 119 64.7
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 1.5e-35 153.7 160 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 3.8e-34 149.1 109 62.4
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 3.8e-34 149.1 101 66.3
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 5.0e-34 148.7 148 52.7
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 8.5e-34 147.9 134 52.2
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 3.2e-33 146.0 104 61.5
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 2.1e-32 143.3 98 65.3
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 1.4e-28 130.6 98 66.3
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 1.4e-28 130.6 98 66.3
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 3.2e-25 119.4 95 60.0
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 5.5e-25 118.6 93 60.2
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.6e-19 100.5 71 63.4
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 1.0e-15 87.8 73 54.8
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 2.6e-14 83.2 78 51.3
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 5.7e-14 82.0 73 53.4
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 1.3e-13 80.9 68 55.9
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 7.7e-11 71.6 51 62.7
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.1e-09 67.8 48 68.8
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 2.5e-09 66.6 46 58.7
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 1.0e-07 61.2 58 51.7
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 7.5e-06 55.1 99 37.4


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