Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 3.2e-60 235.0 123 100.0
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 3.0e-58 228.4 123 96.7
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 3.9e-26 121.7 113 56.6
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 4.3e-25 118.2 100 61.0
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 5.7e-25 117.9 105 58.1
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 8.2e-24 114.0 101 57.4
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 8.2e-24 114.0 115 53.9
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 1.1e-23 113.6 100 57.0
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 2.4e-23 112.5 112 54.5
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 2.4e-23 112.5 121 51.2
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 5.3e-23 111.3 103 57.3
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 6.9e-23 110.9 116 51.7
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 9.0e-23 110.5 123 48.8
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 9.0e-23 110.5 96 57.3
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 1.2e-22 110.2 94 59.6
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 1.2e-22 110.2 113 52.2
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.2e-22 110.2 96 59.4
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 1.2e-22 110.2 113 53.1
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 2.0e-22 109.4 123 49.6
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 1.7e-21 106.3 124 49.2
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 2.2e-21 105.9 96 58.3
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 2.9e-21 105.5 122 46.7
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 3.8e-21 105.1 122 42.6
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 3.8e-21 105.1 123 45.5
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 3.8e-21 105.1 95 58.9
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 3.8e-21 105.1 123 48.0
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 5.0e-21 104.8 123 50.4
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 5.0e-21 104.8 123 48.0
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 1.4e-20 103.2 114 52.6
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 1.4e-20 103.2 123 46.3
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 2.5e-20 102.4 95 54.7
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 2.5e-20 102.4 123 48.0
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.5e-20 102.4 94 56.4
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 2.5e-20 102.4 117 49.6
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 3.2e-20 102.1 115 47.0
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 4.2e-20 101.7 95 53.7
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 4.2e-20 101.7 123 44.7
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 4.2e-20 101.7 123 46.3
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 5.5e-20 101.3 97 56.7
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 7.2e-20 100.9 123 45.5
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 7.2e-20 100.9 114 50.9
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.1e-19 99.4 115 52.2
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 2.1e-19 99.4 111 51.4
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 3.6e-19 98.6 116 50.0
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 6.1e-19 97.8 106 52.8
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.0e-18 97.1 121 43.8
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.0e-18 97.1 111 48.6
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 1.0e-18 97.1 96 50.0
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 1.4e-18 96.7 121 43.8
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.4e-18 96.7 111 48.6
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 3.0e-18 95.5 121 43.8
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 3.0e-18 95.5 96 54.2
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 8.8e-18 94.0 114 47.4
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 1.1e-17 93.6 119 44.5
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 3.3e-17 92.0 79 57.0
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 3.3e-17 92.0 125 41.6
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 4.3e-17 91.7 123 43.9
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 4.3e-17 91.7 95 50.5
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 5.7e-17 91.3 96 52.1
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 9.7e-17 90.5 96 49.0
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 9.7e-17 90.5 119 40.3
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 1.7e-16 89.7 103 49.5
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 2.8e-16 89.0 95 50.5
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 3.7e-16 88.6 94 48.9
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 3.7e-16 88.6 111 47.7
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.8e-15 86.3 83 51.8
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 4.1e-15 85.1 94 47.9
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 5.3e-15 84.7 79 50.6
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 1.2e-14 83.6 91 51.6
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.2e-14 83.6 79 50.6
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.2e-14 83.6 91 47.3
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.5e-14 83.2 79 49.4
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.6e-14 82.4 121 43.8
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 7.7e-14 80.9 90 45.6
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.3e-13 80.1 91 44.0
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.9e-13 79.0 121 43.0
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 6.5e-13 77.8 121 43.0
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 6.5e-13 77.8 120 41.7
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 6.5e-13 77.8 120 41.7
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 6.5e-13 77.8 121 43.0
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 8.5e-13 77.4 121 43.0
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 8.5e-13 77.4 121 43.0
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 1.9e-12 76.3 75 56.0
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 2.5e-12 75.9 114 43.0
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 3.2e-12 75.5 123 40.7
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 3.2e-12 75.5 123 42.3
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 3.2e-12 75.5 121 40.5
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 4.2e-12 75.1 121 43.0
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 4.2e-12 75.1 121 42.1
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 4.2e-12 75.1 115 35.7
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 1.6e-11 73.2 120 40.0
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.6e-11 73.2 121 38.8
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 1.6e-11 73.2 118 40.7
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 2.7e-11 72.4 121 39.7
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 2.7e-11 72.4 63 58.7
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 3.9e-10 68.6 79 46.8
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 5.1e-10 68.2 122 39.3
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 7.4e-09 64.3 75 44.0
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 7.4e-09 64.3 90 34.4
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 2.8e-08 62.4 94 37.2
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 6.3e-08 61.2 110 41.8
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.2e-06 57.0 63 50.8
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 5.9e-06 54.7 98 37.8
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 7.7e-06 54.3 77 36.4


User provided reference genes

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