Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1471 Papaver somniferum HOM05D009101 ORTHO05D011226 1.1e-94 350.1 195 100.0
Nn4g25278 Nelumbo nucifera HOM05D009101 ORTHO05D011226 2.6e-24 116.3 110 62.7
Eucgr.H04137 Eucalyptus grandis HOM05D009101 ORTHO05D011226 8.4e-23 111.3 111 59.5
FvH4_4g21731 Fragaria vesca HOM05D009101 ORTHO05D011226 1.0e-20 104.4 111 56.8
FAN12G1764 Fragaria x ananassa HOM05D009101 ORTHO05D011226 1.0e-20 104.4 111 56.8
ATR0796G016 Amborella trichopoda HOM05D009101 ORTHO05D011226 2.3e-20 103.2 152 46.7
QL06p014659 Quercus lobata HOM05D009101 ORTHO05D011226 2.3e-20 103.2 106 59.4
Cfa015746 Carpinus fangiana HOM05D009101 ORTHO05D011226 3.0e-20 102.8 165 46.7
Dinv29494 Davidia involucrata HOM05D009101 ORTHO05D011226 8.7e-20 101.3 90 63.3
Phvul.009G220900 Phaseolus vulgaris HOM05D009101 ORTHO05D011226 8.7e-20 101.3 116 56.0
Glyma.09G080400 Glycine max HOM05D009101 ORTHO05D011226 2.5e-19 99.8 108 54.6
CANSAT78G2401 Cannabis sativa HOM05D009101 ORTHO05D011226 4.3e-19 99.0 99 59.6
Atru.chr4.3183 Acer truncatum HOM05D009101 ORTHO05D011226 5.6e-19 98.6 97 57.7
VMungo1309G0395 Vigna mungo HOM05D009101 ORTHO05D011226 7.4e-19 98.2 159 43.4
Medtr2g045060 Medicago truncatula HOM05D009101 ORTHO05D011226 1.6e-18 97.1 160 45.6
RcHm_v2.0_Chr4g0427961 Rosa chinensis HOM05D009101 ORTHO05D011226 2.8e-18 96.3 101 56.4
RcHm_v2.0_Chr4g0427931 Rosa chinensis HOM05D009101 ORTHO05D011226 6.2e-18 95.1 130 47.7
MBI18_g39665_MAGBIO Magnolia biondii HOM05D009101 ORTHO05D011226 8.1e-18 94.7 134 47.8
PGR004G1430 Punica granatum HOM05D009101 ORTHO05D011226 1.1e-17 94.4 172 41.9
CiPaw.01G127500 Carya illinoinensis HOM05D009101 ORTHO05D011226 2.4e-17 93.2 138 47.1
Potri.010G003700 Populus trichocarpa HOM05D009101 ORTHO05D011226 3.1e-17 92.8 131 49.6
GSVIVG01017702001 Vitis vinifera HOM05D009101 ORTHO05D011226 3.1e-17 92.8 97 53.6
Ciclev10005889m.g Citrus clementina HOM05D009101 ORTHO05D011226 1.2e-16 90.9 83 60.2
Oeu002209.1 Olea europaea HOM05D009101 ORTHO05D011226 1.5e-16 90.5 173 41.0
Actinidia08061 Actinidia chinensis HOM05D009101 ORTHO05D011226 3.4e-16 89.4 117 47.0
Lalb_Chr08g0232991 Lupinus albus HOM05D009101 ORTHO05D011226 3.4e-16 89.4 145 44.8
MD16G1133700 Malus domestica HOM05D009101 ORTHO05D011226 9.9e-16 87.8 124 44.4
Psat1g017160 Pisum sativum HOM05D009101 ORTHO05D011226 9.9e-16 87.8 154 42.9
Hma1.2p1_1067F.1_g253870 Hydrangea macrophylla HOM05D009101 ORTHO05D011226 2.9e-15 86.3 113 49.6
FAN07G2413 Fragaria x ananassa HOM05D009101 ORTHO05D011226 3.8e-15 85.9 125 47.2
Glyma.15G185900 Glycine max HOM05D009101 ORTHO05D011226 3.5e-13 79.3 127 44.1
Os05g0137600 Oryza sativa ssp. japonica HOM05D009101 ORTHO05D011226 2.3e-12 76.6 147 42.9
Rhsim12G0024800 Rhododendron simsii HOM05D009101 ORTHO05D011226 5.1e-12 75.5 156 37.8
SEGI_22717 Sequoiadendron giganteum HOM05D009101 ORTHO05D011226 9.6e-11 71.2 69 50.7
Ca_02328_v3 Cicer arietinum L. HOM05D009101 ORTHO05D011226 1.3e-10 70.9 82 51.2
MD13G1137900 Malus domestica HOM05D009101 ORTHO05D011226 9.0e-09 64.7 161 35.4
Mapoly0132s0020 Marchantia polymorpha HOM05D002994 ORTHO05D003337 1.3e-07 60.8 62 45.2
AagrBONN_evm.TU.Sc2ySwM_117.294 Anthoceros agrestis HOM05D002994 ORTHO05D003337 1.7e-07 60.5 91 39.6
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 2.5e-06 56.6 80 38.8
Gohir.D11G250500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 9.3e-06 54.7 77 37.7
Gorai.007G268600 Gossypium raimondii HOM05D002994 ORTHO05D003337 9.3e-06 54.7 77 37.7


User provided reference genes

Program Settings