Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1462 Papaver somniferum HOM05D006254 ORTHO05D007409 2.6e-71 271.9 138 100.0
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 7.0e-48 194.1 108 92.6
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 4.6e-23 111.7 109 56.0
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 1.2e-20 103.6 109 53.2
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 4.7e-20 101.7 109 52.3
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 6.1e-20 101.3 111 50.5
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 8.0e-20 100.9 124 45.2
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 8.0e-20 100.9 108 52.8
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 8.0e-20 100.9 108 54.6
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 1.0e-19 100.5 113 46.0
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 1.8e-19 99.8 94 56.4
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 2.3e-19 99.4 94 56.4
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 2.3e-19 99.4 111 50.5
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 3.1e-19 99.0 94 55.3
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 3.1e-19 99.0 108 55.6
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 8.9e-19 97.4 110 50.0
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 1.2e-18 97.1 110 48.2
ClCG04G002460 Citrullus lanatus HOM05D006254 ORTHO05D007409 1.5e-18 96.7 98 54.1
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 1.5e-18 96.7 97 53.6
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 1.5e-18 96.7 95 53.7
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 2.0e-18 96.3 109 52.3
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 2.0e-18 96.3 110 47.3
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 2.0e-18 96.3 107 52.3
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 2.0e-18 96.3 112 51.8
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 2.6e-18 95.9 123 47.2
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 4.4e-18 95.1 111 50.5
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 4.4e-18 95.1 110 50.0
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 5.8e-18 94.7 109 50.5
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 5.8e-18 94.7 113 49.6
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 9.8e-18 94.0 109 52.3
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.3e-17 93.6 108 46.3
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 1.3e-17 93.6 109 50.5
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 1.7e-17 93.2 97 53.6
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 2.9e-17 92.4 108 46.3
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 4.9e-17 91.7 94 50.0
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 6.4e-17 91.3 109 48.6
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 1.1e-16 90.5 105 45.7
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.1e-16 90.5 109 46.8
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 1.1e-16 90.5 108 48.1
Haze_25433 Corylus avellana HOM05D006254 ORTHO05D007409 2.4e-16 89.4 91 52.7
Haze_25436 Corylus avellana HOM05D006254 ORTHO05D007409 2.4e-16 89.4 91 52.7
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 2.4e-16 89.4 108 45.4
Lj4g0022315 Lotus japonicus HOM05D006254 ORTHO05D007409 3.2e-16 89.0 102 50.0
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 5.4e-16 88.2 109 44.0
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 5.4e-16 88.2 109 45.9
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 9.2e-16 87.4 108 45.4
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 1.2e-15 87.0 103 45.6
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 1.2e-15 87.0 83 53.0
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 2.7e-15 85.9 115 43.5
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 4.6e-15 85.1 91 52.7
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 6.0e-15 84.7 110 44.5
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 7.8e-15 84.3 132 43.2
HanXRQChr02g0035161 Helianthus annuus HOM05D006254 ORTHO05D007409 1.0e-14 84.0 90 51.1
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 1.3e-14 83.6 108 44.4
Migut.H00787 Erythranthe guttata HOM05D006254 ORTHO05D007409 1.7e-14 83.2 103 43.7
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 2.3e-14 82.8 109 44.0
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 3.9e-14 82.0 110 42.7
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 3.9e-14 82.0 110 42.7
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 6.6e-14 81.3 134 38.8
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 8.6e-14 80.9 120 42.5
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 1.1e-13 80.5 102 42.2
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 1.1e-13 80.5 102 42.2
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 1.1e-13 80.5 102 42.2
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 1.5e-13 80.1 112 42.0
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 1.9e-13 79.7 120 42.5
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 2.5e-13 79.3 109 40.4
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 2.5e-13 79.3 97 44.3
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.5e-13 79.3 120 41.7
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.5e-13 79.3 120 41.7
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 4.3e-13 78.6 108 41.7
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 7.3e-13 77.8 111 41.4
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 9.5e-13 77.4 111 41.4
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 9.5e-13 77.4 106 40.6
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.2e-12 77.0 120 44.2
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 1.6e-12 76.6 104 41.3
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 1.6e-12 76.6 120 41.7
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 3.6e-12 75.5 90 45.6
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 3.6e-12 75.5 120 40.8
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 2.3e-11 72.8 109 41.3
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 6.8e-11 71.2 91 46.2
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 3.4e-10 68.9 90 42.2
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 4.4e-10 68.6 74 50.0
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 7.5e-10 67.8 124 34.7
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 4.9e-09 65.1 109 41.3
BolC4t22792H Brassica oleracea HOM05D006254 ORTHO05D007409 8.3e-09 64.3 96 39.6
HanXRQChr13g0399511 Helianthus annuus HOM05D006254 ORTHO05D007409 1.4e-08 63.5 82 45.1
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 3.2e-08 62.4 192 28.6
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 3.2e-08 62.4 102 36.3
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 3.2e-08 62.4 102 36.3
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 3.5e-07 58.9 115 40.9
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 6.0e-07 58.2 75 44.0
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 1.3e-06 57.0 102 41.2


User provided reference genes

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