Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 1.8e-194 682.9 510 100.0
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 8.3e-163 577.8 488 82.6
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 1.6e-153 547.0 488 83.6
PSO170G1523 Papaver somniferum HOM05D031015 ORTHO05D002188 1.1e-133 481.1 457 79.2
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 4.7e-17 93.6 195 46.2
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 3.1e-16 90.9 189 40.7
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 2.0e-15 88.2 193 39.9
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 9.9e-15 85.9 188 36.2
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 1.3e-14 85.5 194 38.7
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 1.7e-14 85.1 189 40.2
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 1.7e-14 85.1 189 43.4
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 1.7e-14 85.1 189 45.0
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 4.9e-14 83.6 196 37.2
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 1.1e-13 82.4 179 44.1
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 1.9e-13 81.6 184 36.4
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 2.4e-13 81.3 198 36.4
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 2.4e-13 81.3 193 40.4
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 3.2e-13 80.9 188 39.4
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 4.2e-13 80.5 178 38.2
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 5.4e-13 80.1 189 35.4
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.4e-13 80.1 355 36.6
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 5.4e-13 80.1 355 33.0
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 7.1e-13 79.7 178 50.0
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 7.1e-13 79.7 91 47.3
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 9.2e-13 79.3 95 45.3
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 1.2e-12 79.0 100 47.0
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 1.2e-12 79.0 189 37.6
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 1.2e-12 79.0 192 37.5
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 2.7e-12 77.8 189 43.4
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.7e-12 77.8 188 41.0
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.7e-12 77.8 100 43.0
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.7e-12 77.8 100 43.0
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 3.5e-12 77.4 182 39.6
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.5e-12 77.4 186 38.7
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.5e-12 77.4 182 39.6
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 3.5e-12 77.4 188 44.7
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 3.5e-12 77.4 192 43.2
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 4.6e-12 77.0 187 36.9
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 7.8e-12 76.3 91 47.3
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 7.8e-12 76.3 187 36.9
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.0e-11 75.9 188 36.2
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 1.7e-11 75.1 96 44.8
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.3e-11 74.7 182 33.0
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 2.3e-11 74.7 95 43.2
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 3.9e-11 73.9 509 32.6
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 5.1e-11 73.6 186 36.0
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 5.1e-11 73.6 98 45.9
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 6.6e-11 73.2 95 42.1
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 6.6e-11 73.2 91 44.0
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 1.5e-10 72.0 178 31.5
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 1.5e-10 72.0 181 42.0
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 1.5e-10 72.0 184 29.9
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 1.9e-10 71.6 173 34.1
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 4.3e-10 70.5 184 42.9
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 7.3e-10 69.7 183 39.9
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 7.3e-10 69.7 95 40.0
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 7.3e-10 69.7 165 38.8
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 9.6e-10 69.3 173 32.9
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 9.6e-10 69.3 188 31.9
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 9.6e-10 69.3 101 42.6
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 1.3e-09 68.9 199 38.2
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.3e-09 68.9 289 29.4
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 1.6e-09 68.6 93 40.9
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 2.1e-09 68.2 185 35.1
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 2.1e-09 68.2 185 35.1
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 2.1e-09 68.2 185 35.1
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 2.1e-09 68.2 91 40.7
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 2.1e-09 68.2 100 42.0
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 2.8e-09 67.8 92 37.0
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 2.8e-09 67.8 92 37.0
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 2.8e-09 67.8 92 37.0
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 2.8e-09 67.8 98 37.8
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 4.8e-09 67.0 182 39.6
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 4.8e-09 67.0 93 36.6
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 4.8e-09 67.0 91 37.4
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 4.8e-09 67.0 183 37.7
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 6.2e-09 66.6 178 38.2
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 6.2e-09 66.6 183 39.9
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 8.1e-09 66.2 186 36.6
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 8.1e-09 66.2 93 36.6
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 8.1e-09 66.2 87 37.9
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 8.1e-09 66.2 87 39.1
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 1.1e-08 65.9 185 38.4
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.1e-08 65.9 91 41.8
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 1.1e-08 65.9 183 37.7
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.4e-08 65.5 544 32.0
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 1.4e-08 65.5 189 34.9
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 1.4e-08 65.5 96 41.7
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 2.4e-08 64.7 93 35.5
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 3.1e-08 64.3 184 37.5
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 3.1e-08 64.3 93 40.9
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 3.1e-08 64.3 196 31.1
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 4.0e-08 63.9 93 35.5
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 5.3e-08 63.5 186 36.0
SGA_v2.0_scaffold111G31429 Striga asiatica HOM05D002129 ORTHO05D002188 5.3e-08 63.5 95 38.9
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 5.3e-08 63.5 190 35.8
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 1.2e-07 62.4 180 34.4
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 1.2e-07 62.4 185 35.7
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.5e-07 62.0 112 35.7
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.5e-07 62.0 112 35.7
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 2.0e-07 61.6 101 38.6
Lsat_1_v5_gn_6_12040 Lactuca sativa HOM05D002129 ORTHO05D002188 2.6e-07 61.2 456 29.4
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 7.6e-07 59.7 93 37.6
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 9.9e-07 59.3 302 24.8
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 1.3e-06 58.9 92 39.1
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.3e-06 58.9 92 40.2
AL7G47470 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 1.7e-06 58.5 183 38.8
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 1.7e-06 58.5 188 34.0
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 2.2e-06 58.2 93 34.4
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 2.2e-06 58.2 93 35.5
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 2.2e-06 58.2 301 23.9
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 2.2e-06 58.2 96 36.5
Sc07g0009950 Simmondsia chinensis HOM05D002129 ORTHO05D002188 2.9e-06 57.8 91 34.1
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 3.8e-06 57.4 91 35.2
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 6.4e-06 56.6 179 35.2
Sp2g00430 Schrenkiella parvula HOM05D002129 ORTHO05D002188 8.4e-06 56.2 91 33.0


User provided reference genes

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