Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 6.3e-132 474.2 250 100.0
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 5.9e-130 467.6 250 98.4
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 5.4e-75 285.0 249 61.0
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 5.4e-75 285.0 249 61.0
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 6.0e-74 281.6 253 62.5
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 7.9e-74 281.2 253 59.3
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 3.0e-73 279.3 254 59.8
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 3.9e-73 278.9 243 62.1
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 3.3e-72 275.8 248 60.5
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 4.3e-72 275.4 251 60.2
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 5.6e-72 275.0 243 62.1
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 9.6e-72 274.2 254 61.4
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 1.3e-71 273.9 254 59.4
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.3e-71 273.9 247 58.7
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.3e-71 273.9 252 59.1
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 1.6e-71 273.5 249 60.2
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 2.1e-71 273.1 255 57.3
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.8e-71 272.7 253 57.7
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 6.2e-71 271.6 247 57.9
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.1e-70 270.8 242 58.7
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.8e-70 270.0 247 58.7
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.8e-70 270.0 248 59.3
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.4e-70 269.6 238 58.0
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 3.1e-70 269.2 256 55.9
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 5.3e-70 268.5 249 58.2
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 5.3e-70 268.5 226 61.9
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 6.9e-70 268.1 251 58.6
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.9e-70 268.1 253 58.5
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 9.0e-70 267.7 241 59.3
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.2e-69 267.3 219 61.6
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 1.5e-69 266.9 251 58.2
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.5e-69 266.9 254 56.3
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.5e-69 266.9 253 56.9
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 3.4e-69 265.8 256 59.4
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 9.9e-69 264.2 273 53.8
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.3e-68 263.8 255 56.9
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 3.8e-68 262.3 252 57.9
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 3.8e-68 262.3 251 58.6
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 3.8e-68 262.3 248 58.1
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 8.4e-68 261.2 250 57.2
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 8.4e-68 261.2 250 58.4
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.1e-67 260.8 240 57.9
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-67 260.8 270 55.2
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.4e-67 260.4 247 56.7
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.4e-67 260.4 244 56.1
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.4e-67 259.6 250 57.2
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 3.2e-67 259.2 179 69.8
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 4.2e-67 258.8 254 56.7
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 7.1e-67 258.1 250 56.0
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.1e-67 258.1 250 56.8
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 9.3e-67 257.7 252 55.6
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 9.3e-67 257.7 253 56.1
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 2.1e-66 256.5 254 55.5
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 2.7e-66 256.1 242 57.9
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 7.9e-66 254.6 223 61.9
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 2.3e-65 253.1 252 55.6
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 3.0e-65 252.7 253 55.7
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 5.1e-65 251.9 244 56.6
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 8.7e-65 251.1 250 54.8
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 8.7e-65 251.1 254 54.3
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 1.1e-64 250.8 225 59.6
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.9e-64 250.0 252 56.3
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.9e-64 250.0 252 54.8
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.9e-64 250.0 208 63.0
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 2.5e-64 249.6 256 56.2
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.3e-64 249.2 243 56.4
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 3.3e-64 249.2 243 56.4
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 5.6e-64 248.4 255 56.9
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 9.6e-64 247.7 177 68.4
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.6e-63 246.9 241 58.1
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.6e-63 246.9 174 69.0
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 3.7e-63 245.7 223 57.8
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.7e-63 245.7 251 53.0
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 4.8e-63 245.4 244 54.9
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 4.8e-63 245.4 250 54.8
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 6.2e-63 245.0 251 53.8
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 8.1e-63 244.6 262 53.4
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-62 244.2 294 50.3
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.8e-62 243.4 264 53.0
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.8e-62 243.4 264 53.0
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.4e-62 243.0 250 53.6
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 3.1e-62 242.7 250 54.0
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 3.1e-62 242.7 250 54.8
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 4.0e-62 242.3 265 52.1
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 5.3e-62 241.9 238 55.0
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.2e-61 240.7 252 54.0
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.0e-60 237.7 263 53.2
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 2.9e-60 236.1 162 68.5
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 3.8e-60 235.7 237 54.9
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 6.5e-60 235.0 177 62.7
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.1e-59 234.2 255 51.0
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 2.3e-57 226.5 231 54.5
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.9e-56 223.4 213 52.1
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 5.7e-56 221.9 210 55.7
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 4.8e-55 218.8 243 49.4
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 6.9e-54 214.9 144 73.6
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 9.0e-54 214.5 279 48.7
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 9.0e-54 214.5 144 72.2
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 6.5e-52 208.4 185 58.9
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.9e-51 206.8 215 47.9
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.2e-51 206.1 219 53.0
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 2.1e-50 203.4 241 50.2
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 3.9e-49 199.1 208 53.4
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 6.7e-41 171.8 134 61.9
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 6.3e-39 165.2 186 50.5
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 4.1e-38 162.5 210 41.4
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.2e-37 161.0 176 52.8
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 7.9e-34 148.3 164 43.9
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.8e-33 147.1 241 42.3
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 6.7e-33 145.2 184 40.8
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 5.7e-32 142.1 211 39.8
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 6.3e-31 138.7 167 49.1
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 1.1e-30 137.9 95 68.4
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 1.2e-29 134.4 157 52.9
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 5.2e-25 119.0 156 46.8
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.7e-23 112.8 140 50.0
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 2.4e-22 110.2 96 57.3
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 3.4e-16 89.7 68 61.8
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 3.2e-11 73.2 183 27.3
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 6.1e-10 68.9 129 31.0
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 4.0e-09 66.2 134 34.3
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 3.1e-06 56.6 139 30.9


User provided reference genes

Program Settings