Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-198 696.4 359 100.0
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 7.8e-176 620.5 359 90.3
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 4.7e-112 408.7 263 82.5
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 4.7e-112 408.7 263 82.5
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 4.7e-112 408.7 263 82.5
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.2e-109 399.8 363 61.7
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 3.5e-107 392.5 224 89.7
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 8.6e-106 387.9 251 82.1
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.1e-96 356.7 360 56.9
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 1.4e-92 344.0 357 54.9
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 2.7e-91 339.7 359 54.0
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 7.8e-91 338.2 356 55.3
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 4.3e-89 332.4 389 51.2
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 2.1e-88 330.1 360 53.3
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 2.8e-88 329.7 365 52.1
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.8e-88 329.7 360 52.5
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.1e-87 327.8 356 53.1
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 5.2e-87 325.5 356 53.1
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 5.2e-87 325.5 349 51.3
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.5e-86 323.9 361 52.4
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 2.0e-86 323.6 352 53.1
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.4e-86 322.4 352 52.3
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.8e-86 322.0 354 52.5
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 6.4e-85 318.5 357 51.0
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.4e-84 317.4 361 52.1
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 9.2e-84 314.7 355 53.0
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.2e-83 314.3 354 50.0
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.6e-82 308.5 368 49.5
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 2.5e-81 306.6 360 50.0
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 3.3e-81 306.2 355 51.5
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 4.3e-81 305.8 351 51.3
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 8.1e-80 301.6 353 51.8
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.4e-79 300.8 348 48.0
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 3.1e-79 299.7 348 48.0
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 5.2e-79 298.9 408 47.1
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 8.9e-79 298.1 358 50.3
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 8.9e-79 298.1 350 47.7
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 5.8e-78 295.4 350 48.6
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 6.4e-77 292.0 358 49.7
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 6.4e-77 292.0 351 49.3
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.1e-76 291.2 347 50.1
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.1e-76 291.2 330 53.0
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 1.9e-76 290.4 357 46.5
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.4e-76 290.0 351 50.1
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.6e-75 287.3 363 47.1
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.1e-75 287.0 347 49.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 3.0e-74 283.1 345 48.7
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 3.9e-74 282.7 352 47.4
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 2.5e-73 280.0 312 52.2
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 2.4e-71 273.5 356 47.8
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 5.2e-71 272.3 360 46.1
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 6.8e-71 271.9 362 45.9
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 6.8e-71 271.9 358 45.8
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 8.9e-71 271.6 335 49.9
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 5.8e-70 268.9 350 46.0
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 1.3e-69 267.7 354 46.9
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 6.4e-69 265.4 359 44.8
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 9.2e-68 261.5 355 43.9
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 1.6e-67 260.8 358 44.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 7.8e-67 258.5 352 46.6
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 1.0e-66 258.1 345 45.2
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 1.5e-65 254.2 357 44.8
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 1.9e-65 253.8 349 44.1
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 4.3e-65 252.7 339 43.7
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 4.3e-65 252.7 309 45.6
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 1.6e-64 250.8 358 43.9
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 2.1e-64 250.4 356 45.5
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 4.8e-64 249.2 352 45.7
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 8.1e-64 248.4 349 45.0
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.1e-63 248.1 348 44.3
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.4e-63 247.7 349 44.4
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 3.1e-63 246.5 347 43.5
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 1.5e-62 244.2 352 44.3
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.0e-62 243.8 358 44.7
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 2.6e-62 243.4 394 43.9
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 5.8e-62 242.3 367 42.2
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 9.9e-62 241.5 367 42.2
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 4.9e-61 239.2 350 44.6
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 4.9e-61 239.2 352 44.6
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 4.9e-61 239.2 357 40.3
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.4e-60 237.7 308 43.5
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.9e-60 237.3 352 43.8
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 2.4e-60 236.9 338 43.8
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.4e-60 235.7 353 44.2
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 7.1e-60 235.3 350 41.4
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 9.3e-60 235.0 353 44.5
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 1.2e-59 234.6 352 43.2
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 1.6e-59 234.2 355 40.8
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 2.7e-59 233.4 357 43.1
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 6.0e-59 232.3 354 43.5
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 6.0e-59 232.3 351 43.6
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 7.8e-59 231.9 353 43.3
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 7.8e-59 231.9 367 38.1
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.7e-58 230.7 349 43.0
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 3.3e-57 226.5 350 42.9
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 7.3e-57 225.3 357 42.6
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.4e-55 221.1 263 49.0
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.4e-55 221.1 274 48.2
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.4e-55 221.1 283 51.6
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 5.3e-55 219.2 361 40.2
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 6.9e-55 218.8 345 40.6
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 9.0e-55 218.4 354 39.3
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 2.0e-54 217.2 467 33.8
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 2.4e-52 210.3 319 39.2
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 5.4e-52 209.1 361 37.1
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 9.3e-52 208.4 201 56.2
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 2.1e-51 207.2 320 40.9
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 6.0e-51 205.7 224 54.9
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.9e-51 205.3 348 38.2
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 6.7e-50 202.2 266 43.6
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 9.0e-47 191.8 371 38.3
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.5e-46 191.0 340 38.5
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 1.7e-45 187.6 368 38.9
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 4.2e-44 183.0 205 49.8
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.7e-43 180.3 335 38.8
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 3.0e-42 176.8 200 49.5
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 2.5e-41 173.7 356 37.4
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 9.0e-39 165.2 275 39.6
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 3.0e-34 150.2 258 38.4
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.8e-31 141.0 290 31.4
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 2.9e-29 133.7 219 39.7
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 4.6e-27 126.3 210 41.4
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.0e-25 120.9 164 42.1
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 1.3e-24 118.2 408 26.7
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 2.6e-22 110.5 123 51.2
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 3.4e-22 110.2 396 24.7
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 2.2e-21 107.5 119 52.1
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 4.2e-20 103.2 96 55.2
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 2.7e-19 100.5 106 58.5
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 2.7e-19 100.5 103 48.5
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 3.5e-14 83.6 166 31.3
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 1.3e-13 81.6 202 29.7
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 5.0e-13 79.7 71 57.7
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.2e-08 64.3 63 52.4
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.2e-08 64.3 63 52.4
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 7.0e-07 59.3 372 21.8
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 9.1e-07 58.9 51 58.8
BcaB04g18591 Brassica carinata HOM05D000144 ORTHO05D006884 5.9e-06 56.2 158 31.6


User provided reference genes

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