Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.1e-226 789.6 391 100.0
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 4.2e-207 724.5 391 91.8
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 2.2e-171 605.9 378 79.1
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.1e-170 603.6 380 77.6
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.4e-170 603.2 381 77.2
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.8e-170 602.8 384 78.4
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 7.0e-170 600.9 388 76.0
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 9.1e-170 600.5 387 76.5
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 3.5e-169 598.6 381 76.9
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.7e-168 596.3 389 76.1
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.7e-168 596.3 381 75.9
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 6.6e-168 594.3 388 75.0
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 6.6e-168 594.3 382 75.7
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 1.9e-167 592.8 378 77.8
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 2.5e-167 592.4 387 75.2
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 9.5e-167 590.5 378 76.7
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 9.5e-167 590.5 382 74.9
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 9.5e-167 590.5 380 75.8
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 2.1e-166 589.3 382 75.7
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 4.7e-166 588.2 382 74.3
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 6.1e-166 587.8 382 74.1
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 6.1e-166 587.8 383 76.2
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 8.0e-166 587.4 379 74.7
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 8.0e-166 587.4 380 75.8
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.0e-165 587.0 381 75.6
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.4e-165 586.6 388 75.8
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.4e-165 586.6 383 74.4
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.0e-165 585.5 387 75.7
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 4.0e-165 585.1 379 75.5
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 5.2e-165 584.7 379 74.7
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.2e-164 583.6 388 74.7
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.2e-164 583.6 388 74.7
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.5e-164 583.2 387 74.7
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 2.0e-164 582.8 380 74.7
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 2.0e-164 582.8 389 74.0
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 4.4e-164 581.6 387 73.6
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 4.4e-164 581.6 380 75.0
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 4.4e-164 581.6 380 75.0
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 4.4e-164 581.6 380 75.3
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 4.4e-164 581.6 380 73.9
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 5.7e-164 581.3 378 75.1
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 7.5e-164 580.9 388 74.2
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 9.8e-164 580.5 378 74.1
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 9.8e-164 580.5 379 74.1
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 9.8e-164 580.5 379 74.4
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 4.9e-163 578.2 382 74.1
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 6.4e-163 577.8 382 74.1
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.1e-162 577.0 385 73.5
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.8e-162 576.2 379 74.7
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 5.4e-162 574.7 379 75.2
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 7.0e-162 574.3 380 72.9
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.7e-161 572.4 379 74.1
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 4.6e-161 571.6 389 72.0
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 4.6e-161 571.6 380 72.9
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.0e-160 570.5 386 73.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 1.7e-160 569.7 379 74.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.9e-159 566.2 377 72.4
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 3.3e-159 565.5 385 71.7
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 3.3e-159 565.5 387 71.1
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.6e-158 563.1 379 71.8
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.8e-158 562.4 381 73.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.0e-157 560.5 380 71.8
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.0e-157 560.5 378 73.3
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.4e-157 560.1 378 73.3
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.7e-155 553.1 384 71.4
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.7e-155 553.1 419 69.0
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.1e-154 550.4 393 71.0
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.4e-154 550.1 379 70.7
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 4.1e-154 548.5 388 70.6
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 4.1e-154 548.5 377 72.1
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 5.4e-154 548.1 386 71.5
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.6e-153 546.6 369 72.4
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 3.5e-153 545.4 385 70.6
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 3.5e-153 545.4 392 69.4
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 6.0e-153 544.7 385 70.1
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 6.0e-153 544.7 386 71.5
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 1.0e-152 543.9 379 71.0
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.7e-152 543.1 380 71.3
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 1.7e-152 543.1 388 70.4
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 5.6e-151 538.1 378 71.2
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 7.3e-151 537.7 392 69.4
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.2e-148 530.4 379 68.9
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.8e-141 506.5 369 68.6
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 6.8e-141 504.6 317 78.5
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 6.8e-141 504.6 387 65.9
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.1e-138 497.3 314 77.7
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 7.8e-137 491.1 380 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 5.1e-136 488.4 381 63.0
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 5.6e-135 485.0 384 64.6
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 1.6e-134 483.4 298 79.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 8.1e-134 481.1 298 78.5
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 7.6e-132 474.6 384 61.7
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 3.9e-128 462.2 274 80.7
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 3.8e-123 445.7 323 69.7
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 7.9e-121 438.0 273 77.7
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 4.3e-111 405.6 254 78.7
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 4.3e-103 379.0 229 78.2
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.6e-102 377.1 349 56.4
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 2.1e-102 376.7 241 76.8
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 4.1e-101 372.5 232 76.7
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 1.5e-71 274.2 183 69.9
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 1.8e-61 240.7 226 57.5
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 6.6e-43 179.1 117 71.8
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 4.3e-42 176.4 137 62.0
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 7.3e-42 175.6 126 68.3
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 4.4e-39 166.4 132 65.2
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-38 164.9 139 61.9
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.9e-38 163.7 125 65.6
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.9e-38 163.7 125 65.6
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.2e-36 158.3 139 60.4
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.6e-28 131.3 109 62.4
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.7e-27 127.9 102 63.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.8e-17 94.0 67 65.7
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.6e-12 78.2 54 66.7
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 2.7e-12 77.4 54 64.8
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 6.0e-12 76.3 54 64.8
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 8.7e-11 72.4 280 26.1
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.5e-10 71.6 54 61.1
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 1.3e-09 68.6 43 67.4
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 3.6e-09 67.0 215 27.4
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 1.7e-06 58.2 34 70.6


User provided reference genes

Program Settings