Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 6.4e-123 444.9 388 100.0
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 4.7e-118 428.7 388 98.2
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 1.2e-52 211.5 338 67.8
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 2.6e-52 210.3 337 72.4
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 3.8e-51 206.5 318 70.4
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 1.1e-50 204.9 324 72.8
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.1e-50 204.9 359 65.7
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.9e-50 204.1 323 58.8
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 4.2e-50 203.0 332 69.6
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 7.2e-50 202.2 320 73.8
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 9.4e-50 201.8 332 68.1
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 3.6e-49 199.9 321 70.1
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 3.6e-49 199.9 321 70.4
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.7e-49 199.5 323 58.5
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 1.0e-48 198.4 322 67.4
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 1.0e-48 198.4 336 71.1
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 1.0e-48 198.4 332 67.2
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.3e-48 197.2 318 71.7
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 3.0e-48 196.8 319 69.9
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 3.0e-48 196.8 319 69.9
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 3.0e-48 196.8 319 69.9
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 3.0e-48 196.8 319 69.9
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 3.9e-48 196.4 324 66.7
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 3.9e-48 196.4 337 63.5
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 5.2e-48 196.1 352 61.1
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 8.8e-48 195.3 316 63.9
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 8.8e-48 195.3 319 70.2
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 1.5e-47 194.5 339 65.8
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 2.0e-47 194.1 318 71.7
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 4.4e-47 193.0 318 69.8
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 4.4e-47 193.0 322 70.8
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 4.4e-47 193.0 317 65.6
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 5.7e-47 192.6 318 69.5
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 5.7e-47 192.6 316 67.4
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 5.7e-47 192.6 323 70.9
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 7.4e-47 192.2 327 67.3
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 1.3e-46 191.4 319 64.9
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 1.7e-46 191.0 357 58.5
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 3.7e-46 189.9 326 71.5
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 4.8e-46 189.5 317 74.4
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 6.3e-46 189.1 310 63.9
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 6.3e-46 189.1 319 66.8
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 1.1e-45 188.3 331 70.1
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.4e-45 188.0 335 58.2
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 1.4e-45 188.0 378 64.3
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.8e-45 187.6 331 64.4
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 3.1e-45 186.8 316 69.9
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 5.3e-45 186.0 304 63.8
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 9.1e-45 185.3 378 64.6
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 9.1e-45 185.3 352 67.9
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 1.2e-44 184.9 323 59.4
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.2e-44 184.9 323 59.1
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 1.2e-44 184.9 340 64.4
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.6e-44 184.5 323 59.4
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 2.0e-44 184.1 335 58.5
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.6e-44 183.7 335 61.5
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 3.5e-44 183.3 322 67.4
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 3.5e-44 183.3 327 70.3
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 4.5e-44 183.0 332 61.1
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 4.5e-44 183.0 304 74.7
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 5.9e-44 182.6 323 51.7
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 7.7e-44 182.2 328 72.3
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 1.0e-43 181.8 324 71.3
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 1.7e-43 181.0 350 64.9
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 2.2e-43 180.6 322 66.5
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 2.2e-43 180.6 323 66.3
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 3.8e-43 179.9 333 65.2
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 5.0e-43 179.5 280 70.0
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 5.0e-43 179.5 297 72.1
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 6.5e-43 179.1 307 66.8
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 6.5e-43 179.1 334 61.1
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.5e-42 177.9 320 61.6
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.5e-42 177.9 320 61.6
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 1.9e-42 177.6 325 70.5
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 1.9e-42 177.6 327 56.9
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 2.5e-42 177.2 316 63.0
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 7.2e-42 175.6 307 66.4
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 1.2e-41 174.9 315 71.7
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 2.7e-41 173.7 343 63.3
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 2.7e-41 173.7 317 63.4
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 3.6e-41 173.3 299 71.2
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 3.6e-41 173.3 320 67.2
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 6.1e-41 172.6 328 56.7
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 8.0e-41 172.2 319 73.0
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 8.0e-41 172.2 322 70.5
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 4.0e-40 169.9 328 63.1
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 6.8e-40 169.1 322 67.1
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 3.4e-39 166.8 333 46.8
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 3.4e-39 166.8 368 55.2
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 5.7e-39 166.0 314 70.1
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 1.7e-38 164.5 324 48.5
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 1.7e-38 164.5 344 56.4
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 4.8e-38 162.9 315 65.7
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 3.1e-37 160.2 324 56.8
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 7.0e-37 159.1 323 55.4
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 1.2e-36 158.3 350 64.6
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 2.7e-36 157.1 322 69.3
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 3.5e-36 156.8 325 67.7
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 3.5e-36 156.8 318 66.0
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 5.9e-36 156.0 332 59.0
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.0e-35 155.2 324 62.7
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 1.0e-35 155.2 309 65.7
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.3e-35 154.8 382 60.5
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 1.3e-35 154.8 335 67.8
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 1.7e-35 154.5 300 73.0
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 1.7e-35 154.5 300 73.3
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 1.7e-35 154.5 300 73.0
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 2.2e-35 154.1 332 55.7
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 2.2e-35 154.1 332 55.7
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 2.9e-35 153.7 335 66.9
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 3.8e-35 153.3 332 63.6
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 3.8e-35 153.3 299 72.2
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 5.0e-35 152.9 318 66.0
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 6.5e-35 152.5 339 65.8
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 6.5e-35 152.5 288 67.4
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 8.5e-35 152.1 288 67.7
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 8.5e-35 152.1 319 58.9
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 1.5e-34 151.4 321 67.6
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 1.5e-34 151.4 303 66.7
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 2.5e-34 150.6 321 62.9
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 3.2e-34 150.2 266 79.7
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 5.5e-34 149.4 322 62.7
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 7.2e-34 149.1 321 63.2
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 7.2e-34 149.1 322 68.0
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 2.1e-33 147.5 336 51.2
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 3.6e-33 146.7 333 63.4
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.0e-32 145.2 323 60.4
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 8.8e-32 142.1 254 73.6
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 2.0e-31 141.0 335 64.8
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 5.7e-31 139.4 352 54.3
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 9.8e-31 138.7 332 62.3
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 4.9e-30 136.3 339 61.4
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 6.3e-30 136.0 326 57.1
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 8.3e-30 135.6 336 54.8
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.4e-29 134.8 378 52.9
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 2.4e-29 134.0 277 62.8
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 5.4e-29 132.9 383 42.0
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 7.0e-29 132.5 311 63.0
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 1.6e-28 131.3 310 60.6
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 2.0e-28 131.0 319 50.8
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 7.7e-28 129.0 326 59.5
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 1.0e-27 128.6 310 65.2
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 2.9e-27 127.1 321 57.0
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 3.8e-27 126.7 309 61.5
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 5.0e-27 126.3 309 61.5
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 8.6e-27 125.6 345 62.9
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 3.3e-26 123.6 341 56.3
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 4.2e-26 123.2 360 51.4
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.6e-25 121.3 344 53.5
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 2.1e-25 120.9 322 57.5
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 2.1e-25 120.9 321 61.4
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 2.8e-25 120.6 306 66.3
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 4.7e-25 119.8 322 57.1
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 6.1e-25 119.4 325 60.3
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 8.0e-25 119.0 335 54.6
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 1.4e-24 118.2 328 59.8
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 6.8e-24 115.9 316 55.4
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 8.9e-24 115.5 331 47.1
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 1.5e-23 114.8 293 38.2
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 5.7e-23 112.8 338 43.2
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 3.7e-22 110.2 316 54.4
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 3.2e-21 107.1 155 48.4
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 9.2e-21 105.5 323 54.8
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 5.9e-20 102.8 281 48.0
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 7.8e-20 102.4 330 56.7
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.0e-19 102.1 101 58.4
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 3.9e-19 100.1 154 64.3
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 3.6e-17 93.6 156 49.4
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 3.6e-17 93.6 93 48.4
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 1.8e-16 91.3 94 50.0
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 1.8e-16 91.3 94 50.0
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 1.2e-15 88.6 93 49.5
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 3.4e-15 87.0 340 49.7
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 3.4e-15 87.0 340 49.7
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 3.4e-15 87.0 340 49.7
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 4.4e-15 86.7 155 53.5
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 2.2e-14 84.3 238 62.2
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 3.7e-14 83.6 332 36.1
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 4.1e-13 80.1 164 53.7
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 4.1e-13 80.1 253 63.2
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 2.7e-12 77.4 156 57.1
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 6.2e-09 66.2 74 45.9
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 5.8e-07 59.7 116 51.7
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 2.9e-06 57.4 105 39.0
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 4.9e-06 56.6 102 38.2


User provided reference genes

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